LLPS-Scc-1328
SPOG_02108
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | mRNA cleavage and polyadenylation specificity factor complex subunit Ysh1 |
Gene Name: | SPOG_02108 |
Ensembl Gene: | SPOG_02108 |
Ensembl Protein: | EPY52789 |
Organism: | Schizosaccharomyces cryophilus |
Taxa ID: | 653667 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Histone locus body, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | EPY52789 | EPY52789 |
UniProt | S9W2P6, S9W2P6_SCHCR | |
GeneBank | KE546989 | EPY52789.1 |
RefSeq | XM_013167213.1 | XP_013022667.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MSKRKDIDEE VSADPTDLLQ FINLGAGNEV GRSCHILQYK GKTVMLDAGV HPAYNGLAAL 60 61 PFYDEFDLST VDVLLISHFH LDHVASLPYV MTKTNFRGRV FMTHPTKAVC KWLLSDYVKV 120 121 SNVGVEDQLY DEKDLTAAFE RMEAVDYHST IEVEGVKFTP YHAGHVLGAC MFFIEMAGVK 180 181 ILYTGDYSRE EDRHLHIAEV PPTKPDILIT ESTYGTASHQ PRLEKEARLL NIVHSTIRNG 240 241 GRVLMPVFAL GRAQELLLIL DEYWNNHYDL RPVPILYASS LARKCMAVFQ TYVNMMNDNI 300 301 RKAFAERNPF IFRYIKNLRN LDRFDDIGPS VIVASPGMLQ NGVSRTLLER WAPDPRNTLL 360 361 LTGYSVEGTM AKQITNEPVE ITSMSGQKIP RRMAVEELSF AAHVDYLQNS EFIDQVKADH 420 421 VILVHGEQTN MGRLKSALLS KFHNQKLDSK VYTPRNCVPL FLYFKGERHV RALGKIAVRK 480 481 PTDGDIMSGI LIQKDAVYKL MSSDDLRDFS DLTTTVLTQK QVIPFFSSME LAKYHLNQMF 540 541 GHVKEERTKS GELCYTVMDA IHLSMPTEHK LTLEWTGNIM NDTIADSVIT VLLGIESSPA 600 601 SVKLTNHKCI HGHIDAKKSK AEDRINKLMM FLESQFGESI TKSKNGVYIK IDQYEASIDF 660 661 STMKVECNNE ILRTRIVHVL SRAVNTILPF SEPLKESLNN VEEQKSKDDS SEETEDNKVT 720 721 PVHEEKKE 728 |
Nucleotide CDS Sequence (FASTA) |
1 ATGTCCAAAA GAAAAGATAT CGATGAAGAA GTTTCTGCTG ATCCTACGGA TTTGCTGCAG 60 61 TTTATTAATC TAGGAGCCGG CAATGAAGTT GGAAGAAGCT GTCATATTCT TCAATACAAA 120 121 GGGAAAACAG TGATGCTGGA TGCTGGTGTT CATCCTGCTT ACAATGGTCT CGCTGCTTTA 180 181 CCGTTTTACG ATGAATTTGA TCTGAGTACT GTTGATGTTC TATTAATCAG CCACTTTCAT 240 241 TTAGATCATG TTGCATCTTT ACCCTATGTG ATGACGAAAA CAAATTTTAG AGGCCGTGTA 300 301 TTCATGACTC ATCCTACGAA AGCCGTTTGC AAATGGCTTT TATCAGACTA TGTTAAAGTC 360 361 AGTAATGTTG GCGTGGAGGA TCAATTGTAT GACGAGAAGG ATCTGACGGC TGCGTTTGAG 420 421 AGAATGGAAG CAGTTGATTA TCATTCTACG ATTGAAGTTG AAGGAGTTAA ATTTACTCCA 480 481 TATCATGCAG GTCACGTTTT AGGTGCTTGT ATGTTTTTTA TTGAAATGGC AGGCGTCAAA 540 541 ATTTTGTATA CTGGAGACTA CTCTAGAGAG GAAGATCGAC ATTTGCATAT AGCAGAAGTT 600 601 CCCCCTACGA AGCCAGATAT CTTAATTACG GAATCTACGT ATGGTACTGC TTCTCATCAA 660 661 CCTCGTCTTG AAAAGGAAGC TCGTCTTCTA AATATTGTGC ATTCTACGAT CCGTAATGGT 720 721 GGGCGTGTGT TAATGCCCGT CTTTGCCCTT GGAAGGGCTC AGGAATTACT CCTTATTTTG 780 781 GACGAATATT GGAACAATCA CTATGATTTA CGTCCTGTAC CCATATTGTA TGCATCTTCC 840 841 TTAGCTAGAA AGTGTATGGC CGTTTTTCAA ACTTATGTAA ACATGATGAA CGATAATATC 900 901 CGTAAGGCAT TTGCTGAACG AAATCCCTTT ATATTCAGAT ACATTAAAAA TTTAAGGAAT 960 961 TTAGATAGAT TCGATGACAT CGGCCCTTCT GTTATTGTAG CTAGTCCTGG TATGCTTCAG 1020 1021 AATGGTGTAT CTCGAACTTT GTTAGAGCGT TGGGCTCCTG ATCCTCGAAA TACATTGTTA 1080 1081 TTGACTGGTT ACTCTGTGGA GGGAACCATG GCAAAACAGA TAACAAATGA GCCGGTTGAG 1140 1141 ATAACATCAA TGTCAGGTCA AAAGATTCCA AGAAGAATGG CTGTTGAAGA GCTTTCATTT 1200 1201 GCTGCTCATG TCGATTATCT TCAGAACAGT GAGTTCATTG ATCAAGTGAA AGCAGACCAT 1260 1261 GTTATACTGG TACATGGTGA GCAGACAAAT ATGGGTCGAT TGAAAAGTGC ACTGTTAAGC 1320 1321 AAATTTCATA ATCAAAAGCT TGATAGCAAG GTTTATACTC CTAGAAATTG TGTACCTTTA 1380 1381 TTTCTTTACT TCAAGGGAGA ACGCCATGTT AGAGCTCTTG GAAAAATTGC AGTCCGCAAA 1440 1441 CCAACTGATG GGGATATTAT GAGTGGAATA TTGATACAAA AAGACGCTGT ATACAAACTT 1500 1501 ATGTCTTCGG ATGACCTTCG AGATTTCAGT GATCTTACGA CTACCGTTTT AACCCAGAAG 1560 1561 CAAGTAATCC CATTCTTCTC TAGTATGGAG CTGGCTAAGT ACCACTTAAA TCAAATGTTT 1620 1621 GGACATGTTA AAGAAGAGCG GACGAAATCT GGGGAATTGT GCTATACTGT CATGGATGCT 1680 1681 ATTCATTTGA GCATGCCAAC TGAGCACAAA CTGACTTTAG AATGGACTGG AAACATCATG 1740 1741 AATGATACCA TCGCAGATTC AGTGATTACC GTTTTGTTAG GAATTGAAAG TAGTCCAGCT 1800 1801 TCTGTAAAAT TGACAAATCA CAAGTGCATT CATGGGCACA TTGACGCAAA GAAATCGAAA 1860 1861 GCAGAGGACC GCATAAATAA GTTAATGATG TTTTTAGAGA GTCAATTTGG CGAAAGCATT 1920 1921 ACAAAGTCGA AAAACGGAGT CTACATAAAA ATTGATCAAT ATGAAGCTTC TATCGACTTT 1980 1981 TCCACTATGA AAGTGGAATG CAATAATGAA ATCCTTCGAA CAAGGATTGT TCACGTTCTT 2040 2041 TCTCGAGCCG TAAATACCAT TCTTCCTTTT TCAGAACCAC TGAAAGAAAG TCTTAATAAT 2100 2101 GTGGAAGAAC AAAAAAGTAA AGATGACTCA AGTGAAGAAA CTGAAGACAA TAAAGTAACG 2160 2161 CCTGTTCATG AAGAAAAAAA AGAATGA 2187 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Scp-1101 | Schizosaccharomyces pombe | 84.91 | 0.0 | 1261 |
LLPS-Scj-1099 | Schizosaccharomyces japonicus | 75.61 | 0.0 | 1162 |
LLPS-Kop-1266 | Komagataella pastoris | 58.33 | 0.0 | 752 |
LLPS-Spr-1322 | Sporisorium reilianum | 55.98 | 0.0 | 741 |
LLPS-Usm-0317 | Ustilago maydis | 55.48 | 0.0 | 740 |
LLPS-Abg-0991 | Absidia glauca | 53.26 | 0.0 | 790 |
LLPS-Yal-1364 | Yarrowia lipolytica | 52.72 | 0.0 | 794 |
LLPS-Tum-0436 | Tuber melanosporum | 51.98 | 0.0 | 778 |
LLPS-Fus-0099 | Fusarium solani | 51.98 | 0.0 | 710 |
LLPS-Put-0505 | Puccinia triticina | 51.52 | 0.0 | 644 |
LLPS-Mel-0921 | Melampsora laricipopulina | 51.18 | 0.0 | 671 |
LLPS-Mam-1806 | Macaca mulatta | 51.06 | 0.0 | 659 |
LLPS-Mao-0953 | Magnaporthe oryzae | 50.76 | 0.0 | 691 |
LLPS-Cog-1267 | Colletotrichum gloeosporioides | 50.5 | 0.0 | 684 |
LLPS-Asg-1077 | Ashbya gossypii | 50.46 | 0.0 | 728 |
LLPS-Trv-1421 | Trichoderma virens | 50.41 | 0.0 | 687 |
LLPS-Coo-1418 | Colletotrichum orbiculare | 50.21 | 0.0 | 688 |
LLPS-Ved-1524 | Verticillium dahliae | 50.21 | 0.0 | 685 |
LLPS-Nec-1204 | Neurospora crassa | 50.14 | 0.0 | 684 |
LLPS-Anp-0904 | Anas platyrhynchos | 50.0 | 0.0 | 674 |
LLPS-Dar-0805 | Danio rerio | 49.93 | 0.0 | 682 |
LLPS-Cogr-1338 | Colletotrichum graminicola | 49.72 | 0.0 | 686 |
LLPS-Tag-2155 | Taeniopygia guttata | 49.7 | 0.0 | 677 |
LLPS-Fuv-0897 | Fusarium verticillioides | 49.57 | 0.0 | 555 |
LLPS-Beb-0879 | Beauveria bassiana | 49.32 | 0.0 | 687 |
LLPS-Dio-2843 | Dipodomys ordii | 49.31 | 0.0 | 665 |
LLPS-Asf-0772 | Aspergillus flavus | 49.23 | 0.0 | 660 |
LLPS-Aso-1129 | Aspergillus oryzae | 49.23 | 0.0 | 660 |
LLPS-Pes-0715 | Pelodiscus sinensis | 49.12 | 0.0 | 679 |
LLPS-Loa-0107 | Loxodonta africana | 49.03 | 0.0 | 672 |
LLPS-Asfu-1445 | Aspergillus fumigatus | 49.02 | 0.0 | 653 |
LLPS-Asn-1214 | Aspergillus nidulans | 48.96 | 0.0 | 651 |
LLPS-Pyt-1213 | Pyrenophora teres | 48.96 | 0.0 | 652 |
LLPS-Ten-3068 | Tetraodon nigroviridis | 48.96 | 0.0 | 660 |
LLPS-Anc-2548 | Anolis carolinensis | 48.83 | 0.0 | 631 |
LLPS-Leo-0164 | Lepisosteus oculatus | 48.74 | 0.0 | 663 |
LLPS-Sac-0923 | Saccharomyces cerevisiae | 48.65 | 0.0 | 712 |
LLPS-Mod-3427 | Monodelphis domestica | 48.62 | 0.0 | 677 |
LLPS-Icp-0963 | Ictalurus punctatus | 48.6 | 0.0 | 667 |
LLPS-Meg-0015 | Meleagris gallopavo | 48.59 | 0.0 | 672 |
LLPS-Asni-0291 | Aspergillus niger | 48.55 | 0.0 | 660 |
LLPS-Asm-0369 | Astyanax mexicanus | 48.49 | 0.0 | 681 |
LLPS-Sah-1067 | Sarcophilus harrisii | 48.48 | 0.0 | 672 |
LLPS-Asc-1140 | Aspergillus clavatus | 48.48 | 0.0 | 656 |
LLPS-Ict-2023 | Ictidomys tridecemlineatus | 48.48 | 0.0 | 676 |
LLPS-Sus-0628 | Sus scrofa | 48.47 | 0.0 | 676 |
LLPS-Mum-1892 | Mus musculus | 48.47 | 0.0 | 672 |
LLPS-Ova-2762 | Ovis aries | 48.47 | 0.0 | 676 |
LLPS-Aim-3798 | Ailuropoda melanoleuca | 48.47 | 0.0 | 676 |
LLPS-Ran-3667 | Rattus norvegicus | 48.47 | 0.0 | 672 |
LLPS-Bot-3108 | Bos taurus | 48.47 | 0.0 | 676 |
LLPS-Orc-1534 | Oryctolagus cuniculus | 48.47 | 0.0 | 676 |
LLPS-Fec-3651 | Felis catus | 48.47 | 0.0 | 676 |
LLPS-Eqc-1986 | Equus caballus | 48.47 | 0.0 | 676 |
LLPS-Fia-0520 | Ficedula albicollis | 48.39 | 0.0 | 642 |
LLPS-Urm-1411 | Ursus maritimus | 48.39 | 0.0 | 640 |
LLPS-Miv-0723 | Microbotryum violaceum | 48.36 | 0.0 | 651 |
LLPS-Gaa-1917 | Gasterosteus aculeatus | 48.34 | 0.0 | 679 |
LLPS-Map-0250 | Magnaporthe poae | 48.33 | 0.0 | 670 |
LLPS-Mup-3064 | Mustela putorius furo | 48.33 | 0.0 | 673 |
LLPS-Caf-2066 | Canis familiaris | 48.28 | 0.0 | 676 |
LLPS-Scm-1725 | Scophthalmus maximus | 48.27 | 0.0 | 660 |
LLPS-Pof-2086 | Poecilia formosa | 48.23 | 0.0 | 670 |
LLPS-Gaga-0671 | Gallus gallus | 48.21 | 0.0 | 681 |
LLPS-Caj-1522 | Callithrix jacchus | 48.18 | 0.0 | 671 |
LLPS-Maf-0211 | Macaca fascicularis | 48.18 | 0.0 | 672 |
LLPS-Myl-4038 | Myotis lucifugus | 48.18 | 0.0 | 672 |
LLPS-Paa-1204 | Papio anubis | 48.18 | 0.0 | 671 |
LLPS-Mal-3311 | Mandrillus leucophaeus | 48.18 | 0.0 | 672 |
LLPS-Hos-0502 | Homo sapiens | 48.18 | 0.0 | 672 |
LLPS-Pap-4048 | Pan paniscus | 48.18 | 0.0 | 672 |
LLPS-Pat-1457 | Pan troglodytes | 48.18 | 0.0 | 672 |
LLPS-Cas-2379 | Carlito syrichta | 48.18 | 0.0 | 671 |
LLPS-Cap-2130 | Cavia porcellus | 48.18 | 0.0 | 676 |
LLPS-Nef-1488 | Neosartorya fischeri | 48.12 | 0.0 | 649 |
LLPS-Trr-1309 | Trichoderma reesei | 48.08 | 0.0 | 674 |
LLPS-Gag-1603 | Gaeumannomyces graminis | 48.05 | 0.0 | 667 |
LLPS-Tar-1923 | Takifugu rubripes | 47.98 | 0.0 | 668 |
LLPS-Scf-0178 | Scleropages formosus | 47.93 | 0.0 | 669 |
LLPS-Fud-1911 | Fukomys damarensis | 47.9 | 0.0 | 671 |
LLPS-Orl-2567 | Oryzias latipes | 47.84 | 0.0 | 667 |
LLPS-Ora-1695 | Ornithorhynchus anatinus | 47.45 | 1e-178 | 530 |
LLPS-Orn-0618 | Oreochromis niloticus | 47.42 | 0.0 | 659 |
LLPS-Mae-0348 | Manihot esculenta | 47.36 | 0.0 | 654 |
LLPS-Xet-1229 | Xenopus tropicalis | 47.35 | 0.0 | 677 |
LLPS-Fuo-1191 | Fusarium oxysporum | 47.25 | 0.0 | 546 |
LLPS-Cea-0477 | Cercocebus atys | 47.24 | 0.0 | 650 |
LLPS-Coc-0378 | Corchorus capsularis | 47.21 | 0.0 | 659 |
LLPS-Thc-0165 | Theobroma cacao | 46.92 | 0.0 | 651 |
LLPS-Blg-1533 | Blumeria graminis | 46.91 | 0.0 | 700 |
LLPS-Nia-1245 | Nicotiana attenuata | 46.88 | 0.0 | 647 |
LLPS-Gog-0316 | Gorilla gorilla | 46.87 | 0.0 | 657 |
LLPS-Nol-1278 | Nomascus leucogenys | 46.87 | 0.0 | 657 |
LLPS-Osl-1195 | Ostreococcus lucimarinus | 46.86 | 0.0 | 552 |
LLPS-Scs-0845 | Sclerotinia sclerotiorum | 46.83 | 0.0 | 702 |
LLPS-Gor-0898 | Gossypium raimondii | 46.77 | 0.0 | 656 |
LLPS-Drm-1692 | Drosophila melanogaster | 46.74 | 0.0 | 638 |
LLPS-Php-0774 | Physcomitrella patens | 46.68 | 0.0 | 664 |
LLPS-Viv-2348 | Vitis vinifera | 46.67 | 0.0 | 660 |
LLPS-Pytr-1527 | Pyrenophora triticirepentis | 46.66 | 0.0 | 659 |
LLPS-Lem-1442 | Leptosphaeria maculans | 46.65 | 0.0 | 671 |
LLPS-Cii-0351 | Ciona intestinalis | 46.64 | 0.0 | 666 |
LLPS-Vir-1352 | Vigna radiata | 46.56 | 0.0 | 643 |
LLPS-Pot-0301 | Populus trichocarpa | 46.55 | 0.0 | 647 |
LLPS-Orp-0293 | Oryza punctata | 46.53 | 0.0 | 660 |
LLPS-Phv-1009 | Phaseolus vulgaris | 46.49 | 0.0 | 646 |
LLPS-Lep-1933 | Leersia perrieri | 46.41 | 0.0 | 671 |
LLPS-Orni-0574 | Oryza nivara | 46.38 | 0.0 | 659 |
LLPS-Ori-1370 | Oryza indica | 46.38 | 0.0 | 659 |
LLPS-Orb-0724 | Oryza barthii | 46.38 | 0.0 | 660 |
LLPS-Orgl-0681 | Oryza glumaepatula | 46.38 | 0.0 | 660 |
LLPS-Ors-1846 | Oryza sativa | 46.38 | 0.0 | 659 |
LLPS-Org-1272 | Oryza glaberrima | 46.38 | 0.0 | 660 |
LLPS-Orm-1831 | Oryza meridionalis | 46.38 | 0.0 | 658 |
LLPS-Pug-0465 | Puccinia graminis | 46.34 | 0.0 | 675 |
LLPS-Orbr-1422 | Oryza brachyantha | 46.28 | 0.0 | 659 |
LLPS-Orr-0329 | Oryza rufipogon | 46.23 | 0.0 | 658 |
LLPS-Via-0646 | Vigna angularis | 46.21 | 0.0 | 642 |
LLPS-Sei-1189 | Setaria italica | 46.2 | 0.0 | 650 |
LLPS-Aon-1610 | Aotus nancymaae | 46.14 | 0.0 | 618 |
LLPS-Brn-0518 | Brassica napus | 46.14 | 0.0 | 637 |
LLPS-Brr-1168 | Brassica rapa | 46.14 | 0.0 | 637 |
LLPS-Bro-0461 | Brassica oleracea | 46.14 | 0.0 | 638 |
LLPS-Hea-1199 | Helianthus annuus | 46.11 | 0.0 | 646 |
LLPS-Cus-1050 | Cucumis sativus | 46.1 | 0.0 | 622 |
LLPS-Rhb-0732 | Rhinopithecus bieti | 46.08 | 0.0 | 611 |
LLPS-Glm-0980 | Glycine max | 45.99 | 0.0 | 639 |
LLPS-Prp-2256 | Prunus persica | 45.89 | 0.0 | 645 |
LLPS-Tra-1268 | Triticum aestivum | 45.84 | 0.0 | 658 |
LLPS-Hov-1612 | Hordeum vulgare | 45.84 | 0.0 | 654 |
LLPS-Art-2314 | Arabidopsis thaliana | 45.84 | 0.0 | 645 |
LLPS-Cae-0668 | Caenorhabditis elegans | 45.8 | 0.0 | 589 |
LLPS-Arl-1438 | Arabidopsis lyrata | 45.69 | 0.0 | 644 |
LLPS-Sob-1862 | Sorghum bicolor | 45.69 | 0.0 | 657 |
LLPS-Gas-1175 | Galdieria sulphuraria | 45.67 | 0.0 | 617 |
LLPS-Zem-0303 | Zea mays | 45.6 | 0.0 | 654 |
LLPS-Sot-0354 | Solanum tuberosum | 45.55 | 0.0 | 635 |
LLPS-Xim-0512 | Xiphophorus maculatus | 45.38 | 0.0 | 650 |
LLPS-Dac-1223 | Daucus carota | 45.34 | 0.0 | 641 |
LLPS-Sol-0195 | Solanum lycopersicum | 45.31 | 0.0 | 632 |
LLPS-Lac-0026 | Latimeria chalumnae | 45.27 | 0.0 | 628 |
LLPS-Met-1095 | Medicago truncatula | 45.19 | 0.0 | 632 |
LLPS-Brd-0688 | Brachypodium distachyon | 45.11 | 0.0 | 654 |
LLPS-Ast-0005 | Aspergillus terreus | 45.07 | 0.0 | 668 |
LLPS-Poa-3522 | Pongo abelii | 44.98 | 0.0 | 612 |
LLPS-Tru-0261 | Triticum urartu | 44.87 | 0.0 | 630 |
LLPS-Sem-2008 | Selaginella moellendorffii | 44.2 | 0.0 | 648 |
LLPS-Crn-0368 | Cryptococcus neoformans | 43.39 | 0.0 | 617 |
LLPS-Chs-1125 | Chlorocebus sabaeus | 43.38 | 0.0 | 571 |
LLPS-Mua-1713 | Musa acuminata | 43.3 | 0.0 | 605 |
LLPS-Amt-1370 | Amborella trichopoda | 43.29 | 0.0 | 632 |
LLPS-Dos-1149 | Dothistroma septosporum | 43.24 | 0.0 | 635 |
LLPS-Chc-0749 | Chondrus crispus | 42.79 | 0.0 | 591 |
LLPS-Otg-3225 | Otolemur garnettii | 42.79 | 0.0 | 559 |
LLPS-Chr-1052 | Chlamydomonas reinhardtii | 42.16 | 0.0 | 546 |
LLPS-Zyt-0560 | Zymoseptoria tritici | 41.48 | 0.0 | 628 |
LLPS-Man-0247 | Macaca nemestrina | 40.9 | 3e-168 | 505 |
LLPS-Phn-0707 | Phaeosphaeria nodorum | 40.54 | 0.0 | 580 |
LLPS-Cym-0470 | Cyanidioschyzon merolae | 40.11 | 0.0 | 557 |
LLPS-Cis-0856 | Ciona savignyi | 38.79 | 1e-101 | 332 |
LLPS-Mea-1179 | Mesocricetus auratus | 36.02 | 3e-94 | 311 |
LLPS-Ere-0954 | Erinaceus europaeus | 35.13 | 2e-92 | 307 |