LLPS-Sac-0827
YBR238C
▼ OVERVIEW
| Status: | Reviewed |
| Protein Name: | Protein RMD9-like, mitochondrial |
| Gene Name: | YBR238C, YBR1608 |
| Ensembl Gene: | YBR238C |
| Ensembl Protein: | YBR238C_mRNA |
| Organism: | Saccharomyces cerevisiae |
| Taxa ID: | 559292 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Description | Tissue/Cell | PMIDs |
|---|---|---|---|
| P-body | "...A similar bioinformatics analysis of previously known yeast P body proteins revealed that in contrast to stress granules, a majority of P body proteins have mRNA binding activity, which suggests that mRNA-protein interactions may contribute more to P body structure than stress granule structure." | Saccharomyces cerevisiae | 26777405 |
▼ FUNCTION
| May be involved in the processing or stability of mitochondrial mRNAs. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | YBR238C_mRNA | YBR238C_mRNA |
| UniProt | P38330, RMD9L_YEAST, D6VQN4 | |
| GeneBank | BK006936, Z36107 | CAA85201.1, DAA07354.1 |
| RefSeq | NM_001178586.1 | NP_009797.1 |
| Entrez | 852540 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MIRLAQQTQV LKGKPPNQFV PHPTKNSLTH PMKFNGTIAM EHHEHNYAIP YTPATFNNPA 60 61 LATYQVSPAN HFVPHFGGNI GANNNNHLAQ NNSNNSNNHH NNNRNHHHNN NRNHHQNNHN 120 121 HSKYNNSNQG NSISPDSPWF HKVCAFEDCV SQTLYMSQTP RRQNMKHHSE HPNSNANPLF 180 181 WDSIGRAMGL YHDLLTTPEL NSDRVSKLVH LLHNGLRANR NQLTRMNKKP DYDSQSFHKE 240 241 MTNYLCKSLR EISEDVLNGK VELNEYGAMH LITAFKELLL FEEAVDIWKA AINGQNTYTS 300 301 NIFLNPRVVG VILPILYDNG VSYPEIQALY EKSSSMINYF HPNLSVGMIR ASLSASENDM 360 361 ALKLFQKLCQ ESTEMKYGYL IETHLSFIGE CKDLNVAQTF FDKALNDEMP YKIDLQVSYV 420 421 KSFLRNIWSQ TRDFNHIYQI WYKSSLHYGR NVNHGISSSL NDTFFDIFFE NYAVDKMQGF 480 481 QTLQNIIQTY NNIKHIDEPF FNIILAKCTV WHDRSILEYI DKSYEAYHIP KTIVAYRILL 540 541 KSMGSVDDAS NAEILQRWMD LIRKSDEIGQ RFIANADWAA LRDATVTWTQ NDRDSKKSNM 600 601 NSTQISRTAT PSPSLTPMDT PAPEHLFNNP QNPMDFYSHP ALQAATASGA FDEFAAEAAS 660 661 SSIPVDGRMV LYLKIVKRYS PYCRDSRQLA RLTTGTAVKY SVLQEVLNQF QTLIVNDIPI 720 721 PELHNLKPTC V 731 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGATCCGTT TAGCTCAGCA AACACAAGTA CTGAAGGGCA AACCCCCAAA CCAGTTTGTT 60 61 CCACATCCGA CAAAGAATTC GCTGACTCAT CCAATGAAAT TTAACGGTAC AATCGCTATG 120 121 GAGCACCATG AACACAACTA TGCCATTCCT TACACGCCTG CTACTTTTAA CAATCCAGCC 180 181 CTCGCTACTT ATCAGGTAAG CCCAGCCAAC CATTTTGTTC CTCACTTTGG TGGCAACATT 240 241 GGAGCCAACA ACAACAATCA TCTAGCTCAG AATAACAGCA ATAATAGTAA CAACCATCAT 300 301 AACAATAACC GTAATCATCA CCACAATAAC AATCGTAACC ATCATCAAAA TAACCATAAT 360 361 CATAGCAAGT ATAATAACTC CAATCAAGGT AATTCAATTA GCCCAGACTC CCCATGGTTT 420 421 CATAAGGTTT GTGCCTTCGA AGATTGCGTT TCACAGACTC TTTATATGTC ACAAACTCCA 480 481 AGGCGTCAAA ACATGAAACA CCATTCAGAA CATCCAAATT CTAACGCTAA TCCATTATTT 540 541 TGGGATTCTA TAGGTAGAGC AATGGGGCTG TATCATGATC TACTCACTAC ACCGGAATTA 600 601 AATTCTGATC GTGTCTCCAA GCTTGTACAT TTACTTCACA ATGGGTTGAG AGCTAATAGA 660 661 AATCAGTTGA CGAGAATGAA CAAGAAACCT GATTACGACT CTCAATCCTT TCACAAAGAA 720 721 ATGACAAACT ATCTTTGCAA ATCTTTGAGA GAGATCTCCG AAGACGTTCT AAACGGCAAG 780 781 GTCGAACTGA ACGAATACGG TGCTATGCAT TTGATAACTG CGTTTAAGGA GCTTTTGTTG 840 841 TTTGAGGAAG CTGTCGACAT ATGGAAAGCT GCAATCAATG GGCAAAATAC CTACACATCT 900 901 AATATTTTTC TGAATCCAAG AGTTGTCGGT GTTATATTAC CCATCTTATA CGACAATGGT 960 961 GTCTCTTATC CAGAAATTCA AGCTCTATAT GAAAAGTCTT CATCGATGAT TAATTACTTC 1020 1021 CATCCAAATC TTTCAGTTGG GATGATCAGA GCCTCTTTAT CTGCTAGTGA AAATGACATG 1080 1081 GCTCTCAAAT TATTCCAAAA ATTATGCCAA GAATCAACCG AAATGAAATA CGGTTATTTG 1140 1141 ATAGAAACCC ATCTTTCCTT CATTGGTGAA TGTAAAGACT TGAATGTGGC TCAAACCTTT 1200 1201 TTTGACAAGG CTTTAAATGA TGAAATGCCA TACAAGATAG ACTTGCAAGT TTCCTACGTG 1260 1261 AAATCCTTTT TAAGAAACAT ATGGAGCCAA ACCCGTGATT TCAACCACAT CTATCAAATC 1320 1321 TGGTACAAGT CTTCTTTACA TTATGGTAGA AACGTCAACC ACGGTATTTC TTCATCTTTG 1380 1381 AATGACACTT TTTTCGACAT TTTTTTTGAA AATTATGCTG TGGACAAGAT GCAAGGTTTT 1440 1441 CAAACTTTAC AAAATATTAT TCAAACTTAC AACAACATCA AGCATATAGA TGAACCTTTC 1500 1501 TTTAACATTA TCTTGGCTAA ATGCACTGTC TGGCATGACC GCAGTATTTT AGAATACATC 1560 1561 GATAAGAGTT ACGAGGCGTA CCACATTCCA AAAACAATAG TCGCTTATAG AATCTTATTA 1620 1621 AAGTCTATGG GATCTGTCGA TGATGCTTCG AATGCAGAAA TTCTCCAAAG ATGGATGGAT 1680 1681 TTAATCCGCA AATCAGATGA AATTGGTCAA AGATTTATTG CCAACGCAGA TTGGGCGGCC 1740 1741 TTAAGAGATG CTACTGTAAC ATGGACCCAA AATGATAGAG ATTCCAAGAA AAGTAACATG 1800 1801 AACAGCACTC AAATAAGCAG AACCGCAACT CCTTCGCCAT CCTTAACTCC AATGGATACT 1860 1861 CCAGCACCAG AGCATTTGTT CAACAATCCT CAAAATCCAA TGGACTTCTA CTCTCATCCA 1920 1921 GCATTGCAAG CAGCAACTGC TTCTGGTGCA TTTGATGAAT TTGCTGCGGA GGCTGCTTCT 1980 1981 TCTTCCATAC CAGTTGACGG CAGAATGGTT TTGTATTTGA AAATTGTTAA ACGTTACTCT 2040 2041 CCATATTGCC GTGATTCCAG ACAACTAGCC AGATTAACAA CAGGGACCGC TGTCAAATAT 2100 2101 TCCGTTTTGC AAGAAGTTTT GAACCAATTC CAAACTTTAA TCGTTAACGA TATTCCTATT 2160 2161 CCTGAATTAC ATAATTTGAA GCCAACGTGT GTTTAA 2196 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Cytoplasm | |
Cellular Component | Integral component of mitochondrial membrane | |
Cellular Component | Mitochondrial inner membrane | |
Cellular Component | Mitochondrion | |
Cellular Component | P-body | |
Molecular Function | MRNA binding | |
Biological Process | Aerobic respiration |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Asg-1004 | Ashbya gossypii | 44.22 | 1e-150 | 461 |
| LLPS-Kop-1119 | Komagataella pastoris | 35.28 | 7e-71 | 249 |