LLPS-Ran-a842
Nsmf
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | NMDA receptor synaptonuclear signaling and neuronal migration factor; Juxtasynaptic attractor of caldendrin on dendritic boutons protein; Jacob protein; Nasal embryonic luteinizing hormone-releasing hormone factor; Nasal embryonic LHRH factor |
Gene Name: | Nsmf, Jac, Nelf |
Ensembl Gene: | ENSRNOG00000008810.8 |
Ensembl Protein: | ENSRNOP00000012129.6 |
Organism: | Rattus norvegicus |
Taxa ID: | 10116 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Postsynaptic density | Predicted from orthologs | (View) |
▼ FUNCTION
Couples NMDA-sensitive glutamate receptor signaling to the nucleus and triggers long-lasting changes in the cytoarchitecture of dendrites and spine synapse processes. Part of the cAMP response element-binding protein (CREB) shut-off signaling pathway. Stimulates outgrowth of olfactory axons and migration of gonadotropin-releasing hormone (GnRH) and luteinizing-hormone-releasing hormone (LHRH) neuronal cells. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSRNOT00000012129.7 | ENSRNOP00000012129.6 |
Ensembl | ENSRNOT00000048353.5 | ENSRNOP00000040572.4 |
Ensembl | ENSRNOT00000048137.5 | ENSRNOP00000045393.3 |
Ensembl | ENSRNOT00000042100.4 | ENSRNOP00000044714.2 |
Ensembl | ENSRNOT00000061303.4 | ENSRNOP00000058016.4 |
UniProt | Q9EPI6, NSMF_RAT, Q5PPF6, Q7TSC6, Q7TSC8, Q9EPI4, Q9EPI5 | |
GeneBank | AJ293699, BC087719, AJ534640, AJ293697, AJ534642, AJ293698 | CAC20868.1, CAC20867.1, AAH87719.1, CAD58979.1, CAC20866.1, CAD58977.1 |
RefSeq | NM_001270626.1, NM_001270627.1, NM_001270628.1, NM_057190.2 | NP_001257555.1, NP_001257556.1, NP_001257557.1, NP_476538.2 |
Entrez | 117536 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MGAAASRRRA LRSEAMSSVA AKVRAARAFG EYLSQSHPEN RNGADHLLAD AYSGHEGSPE 60 61 MQPAPHNKRR LSLVSNGRYE GSISDEAVSG KTATEGPQPR VYTISREPAL LPGSEAEAIE 120 121 LAVVKGRRQR ERHPHHHSQP LRASPGSSRE DISRPCQSWA GSRQGSKECP GCAQLVPGPS 180 181 PRAFGLEQPP LPEASGRHKK LERMYSVDGV SDDVPIRTWF PKENPFSFQT ATTTMQAISV 240 241 FRGYAERKRR KRENDSASVI QRNFRKHLRM VGSRRVKAQT FAERRERSFS RSWSDPTPMK 300 301 ADTSHDSRDS SDLQSSHCTL DEACEDLDWD TEKGLEATAC DTEGFLPPKV MLISSKVPKA 360 361 EYIPTIIRRD DPSIIPILYD HEHATFEDIL EEIEKKLNIY HKGAKIWKML IFCQGGPGHL 420 421 YLLKNKVATF AKVEKEEDMI HFWKRLSRLM SKVNPEPNVI HIMGCYILGN PNGEKLFQNL 480 481 RTLMTPYKVT FESPLELSAQ GKQMIETYFD FRLYRLWKSR QHSKLLDFDD VL 532 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGGTGCCG CCGCCTCCAG GAGGAGGGCG CTGAGGAGCG AGGCCATGTC CTCGGTAGCG 60 61 GCCAAAGTAA GAGCAGCCCG AGCGTTTGGA GAGTACCTGT CCCAGAGTCA CCCTGAGAAC 120 121 CGCAACGGTG CAGACCACCT GCTGGCCGAC GCCTACTCTG GCCACGAAGG GTCCCCAGAG 180 181 ATGCAGCCTG CACCCCACAA CAAGCGCCGC CTCTCCCTCG TCTCCAATGG CCGCTATGAG 240 241 GGCAGCATCT CAGATGAGGC AGTCAGCGGG AAGACGGCTA CAGAGGGCCC CCAGCCCCGT 300 301 GTGTACACCA TCTCTAGAGA GCCAGCCCTG CTGCCTGGCT CTGAAGCCGA AGCCATTGAG 360 361 CTAGCAGTGG TGAAAGGGAG GAGGCAGCGG GAGCGGCACC CTCACCACCA CAGCCAGCCC 420 421 CTGCGCGCCA GCCCAGGCAG CAGCCGTGAG GACATCAGCA GGCCCTGCCA AAGCTGGGCA 480 481 GGAAGCCGCC AGGGCTCCAA AGAATGCCCC GGATGTGCCC AGCTGGTCCC TGGTCCCTCC 540 541 CCTCGGGCCT TCGGGTTGGA ACAGCCACCT CTACCTGAGG CTTCCGGCCG TCACAAGAAG 600 601 CTGGAAAGGA TGTATAGTGT TGATGGAGTG TCTGATGACG TCCCCATCCG TACCTGGTTC 660 661 CCCAAGGAAA ACCCTTTCAG CTTCCAGACG GCAACCACAA CTATGCAAGC CCGCCTGAAC 720 721 TTCCGCAAAC ACCTGCGCAT GGTTGGCAGT CGGCGGGTGA AGGCCCAGAG CAGTGACCTA 780 781 CAGAGCTCAC ACTGCACCCT GGATGAGGCT TGTGAGGACC TGGACTGGGA CACAGAGAAA 840 841 GGCCTGGAGG CCACGGCCTG CGACACTGAG GGCTTCTTGC CACCCAAGGT CATGCTAATC 900 901 TCCTCCAAGG TGCCCAAGGC CGAGTACATC CCAACCATCA TCCGCAGAGA CGACCCATCC 960 961 ATCATCCCCA TCCTCTATGA CCATGAGCAC GCAACGTTCG AGGACATCCT GGAGGAAATA 1020 1021 GAGAAGAAGT TGAACATCTA TCACAAGGGG GCCAAGATCT GGAAGATGCT GATTTTCTGC 1080 1081 CAGGGCGGCC CTGGGCACCT TTATTTGCTC AAGAACAAGG TGGCCACCTT TGCCAAAGTG 1140 1141 GAGAAGGAAG AGGACATGAT CCACTTCTGG AAGAGGCTGA GCCGTCTGAT GAGCAAAGTG 1200 1201 AACCCTGAGC CAAATGTCAT CCACATCATG GGCTGCTACA TCCTGGGGAA CCCTAACGGG 1260 1261 GAGAAGCTAT TCCAGAACCT CAGGACCCTC ATGACCCCTT ACAAGGTTAC CTTTGAGTCG 1320 1321 CCCCTGGAGC TCTCTGCCCA AGGGAAGCAA ATGATTGAGA CCTACTTTGA TTTCCGGCTG 1380 1381 TACCGCCTGT GGAAAAGCCG CCAGCACTCA AAGCTGCTGG ACTTTGATGA CGTCCTGTGA 1440 |
▼ KEYWORD
ID | Family |
Alternative splicing | |
Cell junction | |
Cell membrane | |
Cell projection | |
Complete proteome | |
Cytoplasm | |
Cytoskeleton | |
Lipoprotein | |
Membrane | |
Myristate | |
Nucleus | |
Phosphoprotein | |
Postsynaptic cell membrane | |
Reference proteome | |
Synapse | |
Synaptosome
|
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Apical dendrite | |
Cellular Component | Cell junction | |
Cellular Component | Cortical cytoskeleton | |
Cellular Component | Cytoplasm | |
Cellular Component | Dendrite | |
Cellular Component | Dendritic spine | |
Cellular Component | Glutamatergic synapse | |
Cellular Component | Membrane | |
Cellular Component | Neuron projection | |
Cellular Component | Nuclear envelope | |
Cellular Component | Nuclear euchromatin | |
Cellular Component | Nuclear matrix | |
Cellular Component | Nuclear membrane | |
Cellular Component | Nucleus | |
Cellular Component | Perikaryon | |
Cellular Component | Postsynapse | |
Cellular Component | Postsynaptic density | |
Cellular Component | Postsynaptic membrane | |
Cellular Component | Synapse | |
Molecular Function | Calcium-dependent protein binding | |
Biological Process | Cellular response to amino acid stimulus | |
Biological Process | Cellular response to electrical stimulus | |
Biological Process | Cellular response to gonadotropin stimulus | |
Biological Process | Positive regulation of neuron migration | |
Biological Process | Positive regulation of protein dephosphorylation | |
Biological Process | Postsynapse to nucleus signaling pathway | |
Biological Process | Regulation of dendrite morphogenesis | |
Biological Process | Regulation of neuron apoptotic process | |
Biological Process | Regulation of neuronal synaptic plasticity |
▼ ANNOTATION
Disorder | ||||
IUPred2A |
Domain | ||||
InterPro | LCR-eXXXplorer |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Localization | ||||
COMPARTMENTS |
Expression | ||||
ArrayExpress | TISSUES |
Element | ||||
miRWalk | RAID | microRNA.org |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Hos-a862 | Homo sapiens | 0.0 | 991 | undefined |
LLPS-Mum-a848 | Mus musculus | 0.0 | 1084 | undefined |