LLPS-Ran-a529
Relch
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | RAB11-binding and LisH domain, coiled-coil and HEAT repeat-containing |
| Gene Name: | Relch, RGD1307235, RGD1307235_predicted, rCG_24062 |
| Ensembl Gene: | ENSRNOG00000015508.5 |
| Ensembl Protein: | ENSRNOP00000020892.4 |
| Organism: | Rattus norvegicus |
| Taxa ID: | 10116 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Postsynaptic density | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSRNOT00000020892.4 | ENSRNOP00000020892.4 |
| UniProt | D3ZJ01, D3ZJ01_RAT | |
| GeneBank | AABR07020431, CH474000 | , EDL91735.1 |
| RefSeq | NM_001134546.1 | NP_001128018.1 |
| Entrez | 309053 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAAMAPGGGG SGSGVNPFLS DSDEDDDEVA ATEDQRAGLR LGAGVGLDPG SAGSLSPQDP 60 61 MALGSSTRPG LPVEASAAPG ALAGSGETPS RLSIDAIAAQ LLRDQYLLTA LELHTELLES 120 121 GRELPRLRDY FSNPGNFERQ SGTPPGVGAP GIPGASVVGG AGGREPSTTS GGGQLNRAGS 180 181 ISTLDSLDFA RYSDDGNRET DERVAVLEFE LRKAKETIQA LRANLTKAAE HEVPLQERKN 240 241 YKSSPEIQEP IKPLEKRALN FLVNEFLLKN NYKLTSITFS DENDDQDFEL WDDVGLNIPK 300 301 PPDLLQLYRD FGNHQVTGKD LVDVASGVDE DELEPLTPVL GNIPPTLDTP LPIENSLLVQ 360 361 KLEDKISLLN NEKWSLMEQI RRLESEMDIL KTEHFTTPAV GDSVQPSLAW PSPKDSEDSK 420 421 QSPVVNSSDQ DIQKAKDVHL EIPDGADSFI PKEKSSDSFP TKEREELPPS SVSSKATLHF 480 481 DQPNRKLSPA FHQALLSFCR MSADSRLGSE VSRIADSEKS VMLMLGRCLP HIVPNVLLAK 540 541 REELIPLILC TACLHPEPKE RDQLLHILFN LIKRPDDEQR QMILTGCVAF ARHVGPTRVE 600 601 AELLPQCWEQ INHKYPERRL LVAESCGALA PYLPKEIRSS LVLSMLQQML MEDKADLVRE 660 661 AVIKSLGIIM GYIDDPDKYQ QGFELLLSAL GDPSERVVSA THQVFLPAYA AWTTELGNLQ 720 721 SHLIPTLLSK IEKLLRDGEH GLDEHKLHMY LSALQSLIPS LFALVLQNAP FSSKAKLHGE 780 781 VPHIEVTRFP RPMSPLQDVS TIIGSREQLA VLLQLYDYQL EHEGTTGWES LLWVVNQLLP 840 841 QLIEIVGKIN VTSTACVHEF SRFFWRLCRT FGKIFTNTKV KPQFQEILRL SEENIDSSAG 900 901 NGVLTKATVP IYATGVLTCY IQEEDRKLLV GFLEDVMTLL SLSHAPLDSL KASFVELGAN 960 961 PAYHELLLTV LWYGVVHTSA LVRCTAARMF ELLVKGVNET LVAQRVVPAL ITLSSDPEIS 1020 1021 VRIATIPAFG TIMETVIQRE LLERVKMQLA SFLEDPQYQD QHSLHTEVIR TFGRVGPNAE 1080 1081 PRFRDEFVIP HLHKLALVNN LQIVDSKRLD IATHLFEAYS ALSCCFISED LMVNHFLPGL 1140 1141 RCLRTDMEHL SPEHEVILSS MIKECEQKVE NKTVQEPPGS MSIAASLVSE DTKTKFLNKM 1200 1201 GQLTTSGAML ANVFQRKK 1218 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGGCAA TGGCGCCGGG AGGTGGTGGC AGTGGTAGCG GCGTAAATCC TTTCCTCAGC 60 61 GATTCGGATG AGGACGACGA CGAGGTAGCG GCGACCGAGG ACCAGCGGGC AGGACTTCGG 120 121 CTGGGTGCTG GGGTCGGCCT AGATCCTGGT TCTGCAGGCT CGCTGTCGCC TCAGGACCCC 180 181 ATGGCCCTGG GAAGCAGCAC GCGGCCGGGG CTCCCTGTGG AGGCGTCAGC TGCTCCGGGG 240 241 GCTCTGGCGG GCAGCGGAGA GACCCCTTCC CGATTGTCAA TCGATGCCAT CGCCGCTCAG 300 301 CTGTTGCGCG ATCAGTACTT GCTGACTGCC CTGGAGCTGC ACACCGAGCT GTTGGAGAGC 360 361 GGCCGCGAGC TACCACGGCT GCGCGATTAC TTCTCCAATC CTGGCAACTT CGAGAGGCAG 420 421 AGTGGGACCC CACCAGGGGT GGGGGCGCCT GGGATCCCCG GCGCATCCGT CGTTGGAGGC 480 481 GCTGGAGGTC GGGAACCGAG TACGACGTCG GGCGGAGGAC AGCTCAATCG AGCTGGGAGC 540 541 ATTAGTACTC TTGATTCATT AGACTTTGCA AGATATTCAG ATGATGGTAA CAGGGAAACA 600 601 GATGAAAGAG TGGCGGTCCT GGAGTTTGAA CTACGGAAAG CCAAGGAGAC CATTCAGGCC 660 661 CTCCGAGCCA ACCTAACAAA GGCTGCAGAA CATGAAGTTC CTTTACAGGA ACGAAAAAAT 720 721 TACAAATCAA GTCCTGAAAT TCAGGAGCCA ATCAAACCTC TTGAAAAGAG AGCTCTCAAC 780 781 TTCCTAGTCA ATGAGTTTTT GTTGAAGAAT AATTACAAGC TTACATCAAT AACCTTTTCA 840 841 GATGAAAATG ATGATCAGGA TTTTGAATTG TGGGATGATG TAGGATTAAA CATTCCCAAA 900 901 CCCCCAGACT TGTTACAACT TTACCGAGAC TTTGGAAATC ATCAAGTGAC TGGGAAAGAT 960 961 CTTGTGGATG TGGCCAGTGG AGTAGATGAA GATGAATTAG AGCCTCTTAC ACCAGTTTTA 1020 1021 GGCAACATCC CTCCAACCCT TGATACTCCC CTGCCTATAG AGAACTCCTT GCTAGTACAG 1080 1081 AAATTAGAAG ATAAAATTAG TTTATTAAAT AATGAAAAAT GGTCATTGAT GGAGCAAATC 1140 1141 AGAAGGCTTG AAAGTGAGAT GGACATCCTC AAGACTGAAC ACTTTACCAC CCCAGCAGTT 1200 1201 GGTGATTCTG TTCAGCCTTC CTTGGCTTGG CCGTCCCCAA AAGATTCTGA AGACAGTAAA 1260 1261 CAGAGCCCAG TTGTAAATAG TTCGGACCAG GATATTCAAA AAGCCAAGGA TGTTCATCTT 1320 1321 GAAATACCAG ATGGAGCTGA TTCCTTTATT CCTAAAGAGA AATCATCAGA TTCTTTCCCC 1380 1381 ACAAAGGAAA GAGAAGAGCT GCCACCTTCT TCTGTATCAA GTAAAGCCAC GCTCCATTTC 1440 1441 GATCAGCCCA ATAGGAAATT GTCACCTGCT TTCCACCAAG CACTACTCTC TTTTTGTCGA 1500 1501 ATGTCAGCAG ATAGTCGGTT AGGATCAGAG GTGTCTAGGA TTGCAGACAG TGAAAAAAGT 1560 1561 GTTATGTTAA TGCTGGGACG CTGCCTGCCA CACATTGTTC CTAATGTGCT GTTAGCAAAA 1620 1621 AGAGAGGAGT TGATTCCTCT CATATTGTGT ACAGCGTGCC TACACCCTGA GCCTAAAGAA 1680 1681 AGAGATCAGC TCCTCCATAT ACTCTTCAAC TTGATCAAGA GGCCAGATGA TGAGCAAAGG 1740 1741 CAAATGATAC TGACAGGTTG TGTGGCATTT GCACGTCATG TTGGACCAAC ACGTGTGGAG 1800 1801 GCTGAACTTT TACCACAGTG TTGGGAACAG ATTAATCACA AATATCCAGA AAGACGACTG 1860 1861 CTCGTGGCAG AGTCCTGTGG AGCACTGGCA CCCTACCTTC CTAAAGAAAT CCGTAGTTCC 1920 1921 TTGGTCCTTT CAATGTTGCA ACAGATGTTA ATGGAAGATA AGGCTGATTT GGTAAGAGAA 1980 1981 GCTGTGATTA AAAGCCTGGG TATCATTATG GGCTACATTG ATGATCCTGA CAAATATCAG 2040 2041 CAGGGCTTTG AATTGTTACT CTCGGCCCTG GGTGATCCCT CAGAAAGAGT TGTTAGTGCA 2100 2101 ACACACCAAG TGTTTTTACC AGCCTATGCT GCCTGGACAA CTGAACTGGG AAATTTACAG 2160 2161 TCTCATCTTA TACCTACACT ACTGAGCAAG ATCGAAAAGC TTCTCAGGGA CGGAGAGCAC 2220 2221 GGGCTGGACG AACACAAGCT CCACATGTAT CTTTCTGCCT TGCAGTCCTT GATCCCATCT 2280 2281 CTCTTTGCAT TAGTGCTACA GAATGCACCT TTCTCCAGCA AAGCCAAACT GCATGGTGAA 2340 2341 GTACCACACA TTGAAGTGAC TAGGTTCCCT CGGCCTATGT CACCTCTGCA AGATGTCTCT 2400 2401 ACTATTATTG GAAGTCGCGA GCAATTGGCA GTGCTGCTAC AACTTTATGA TTACCAACTG 2460 2461 GAACACGAGG GTACAACCGG CTGGGAAAGT TTACTCTGGG TTGTCAATCA GTTGTTGCCA 2520 2521 CAGCTTATAG AAATAGTAGG AAAAATAAAT GTAACCTCAA CTGCCTGTGT TCATGAGTTC 2580 2581 TCCAGATTTT TCTGGCGCCT TTGCCGGACA TTTGGCAAAA TTTTTACAAA CACTAAGGTA 2640 2641 AAACCCCAGT TCCAGGAGAT TTTAAGACTC TCTGAAGAAA ACATTGATTC CTCAGCAGGA 2700 2701 AATGGGGTCC TCACTAAAGC TACTGTCCCC ATTTATGCAA CAGGAGTCCT CACGTGTTAT 2760 2761 ATTCAGGAAG AAGACCGAAA GCTATTGGTC GGCTTCTTGG AAGATGTGAT GACGCTGCTT 2820 2821 TCACTGTCTC ATGCTCCTCT TGACAGCCTG AAGGCTTCTT TTGTGGAACT TGGTGCAAAT 2880 2881 CCAGCCTATC ATGAGCTGTT GTTAACTGTG TTGTGGTATG GTGTTGTTCA CACTTCTGCA 2940 2941 CTTGTCAGGT GTACTGCTGC TAGGATGTTT GAGCTGTTGG TGAAGGGGGT GAATGAGACT 3000 3001 CTGGTAGCTC AGAGGGTTGT TCCTGCTCTC ATTACTCTCT CCAGTGACCC TGAAATCTCT 3060 3061 GTCAGGATTG CTACAATTCC AGCATTTGGC ACTATTATGG AAACGGTTAT TCAGAGAGAG 3120 3121 TTGCTAGAAA GAGTGAAAAT GCAGTTGGCT TCTTTCCTGG AAGACCCTCA GTACCAAGAC 3180 3181 CAGCATTCTT TGCATACAGA GGTCATCAGA ACATTTGGCA GAGTTGGGCC TAATGCAGAA 3240 3241 CCCCGGTTCC GAGATGAATT TGTTATACCA CATTTACATA AATTAGCCTT GGTGAACAAC 3300 3301 TTACAAATTG TGGATTCCAA AAGACTGGAC ATTGCAACCC ATCTTTTTGA AGCCTACAGT 3360 3361 GCACTGTCCT GTTGTTTCAT TTCAGAGGAT TTAATGGTAA ATCACTTTTT ACCTGGCCTC 3420 3421 AGATGTTTAC GGACTGACAT GGAGCATCTC TCTCCAGAAC ATGAGGTTAT TTTAAGTTCC 3480 3481 ATGATAAAAG AATGTGAACA AAAAGTAGAA AACAAGACTG TCCAAGAGCC TCCAGGCTCA 3540 3541 ATGTCAATTG CTGCAAGTTT AGTGAGTGAA GACACAAAGA CCAAGTTTTT GAACAAAATG 3600 3601 GGCCAGTTGA CAACATCAGG TGCCATGCTG GCCAATGTGT TTCAGAGGAA GAAGTAG 3657 |
▼ ANNOTATION
| Disorder | ||||
| IUPred2A | ||||
| Domain | ||||
| Gene3D | ||||
| Physicochemical | ||||
| Compute pI/Mw | AAindex | |||
| Localization | ||||
| COMPARTMENTS | ||||
| Expression | ||||
| ArrayExpress | TISSUES | |||
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Hos-a539 | Homo sapiens | 0.0 | 2249 | undefined |
| LLPS-Mum-a535 | Mus musculus | 0.0 | 2426 | undefined |