LLPS-Ran-4614
Spatc1
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | RCG60210 |
| Gene Name: | Spatc1, RGD1565316, rCG_60210 |
| Ensembl Gene: | ENSRNOG00000029590.3 |
| Ensembl Protein: | ENSRNOP00000041285.3 |
| Organism: | Rattus norvegicus |
| Taxa ID: | 10116 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Centrosome/Spindle pole body | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSRNOT00000050522.3 | ENSRNOP00000041285.3 |
| UniProt | B0BMZ4, B0BMZ4_RAT | |
| GeneBank | AC107096, CH473950, BC158623 | , AAI58624.1, EDM15997.1 |
| RefSeq | NM_001115026.1 | NP_001108498.1 |
| Entrez | 315091 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSLLTNYEGL RHQIERLVRE NEELKKLVRL IRENHELKSA IKTQAGGLGI GGLCEAAAGP 60 61 SQQGVFLSPS PAAAKDPRAE DMGMVTLAPL ADMLNTPQLN PAAGSLVNPL AAPLNPLLSG 120 121 QLPLSQNNQF ANFVPCPISN QLTSPIALPP GVTLASSLGL PSTGPLNSQM TSPMAVPPGT 180 181 TLASSLGLNS TGSLTTNSRL VGPPAVSQSG PIMAPLAGTV AVSLSSPLVS STAPLGVSQN 240 241 ILPNPINNVG LSEAPRVRLT EPTRGNLSGT SAGPAPASKV NDARGSRVAE QSRKNAPETE 300 301 RKATSRKSNK LPDSCRDSKQ LARERLVGEI AFQLDRRILS SIFPERVRLY GFTVSNIPEK 360 361 IIQASLNPSS HKLDEDLCQT LTQRYVSIMN RLQSLGYNGR VHPALTEQLV NAYGILRERP 420 421 ELAASEGGTY SVDFLQRVLV ETVHPSMLTD ALLLLSCLNQ LSHDDGKPMF IW 472 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTCTCTAC TTACAAATTA TGAGGGGCTT CGGCATCAGA TTGAGAGGCT GGTGCGGGAA 60 61 AATGAAGAAC TGAAGAAGCT GGTTCGGCTC ATCCGGGAGA ATCACGAGCT CAAATCTGCG 120 121 ATCAAGACTC AGGCAGGTGG CCTTGGCATC GGCGGGCTTT GTGAGGCAGC CGCAGGCCCT 180 181 TCCCAACAGG GTGTTTTCCT GTCTCCATCT CCTGCAGCAG CAAAGGACCC CAGGGCAGAA 240 241 GACATGGGGA TGGTGACACT GGCACCTCTG GCTGACATGT TGAATACCCC ACAGCTCAAT 300 301 CCTGCAGCAG GCTCCCTTGT GAACCCCCTA GCTGCTCCTC TCAACCCACT GCTATCTGGC 360 361 CAATTGCCCT TGTCGCAAAA CAACCAGTTT GCCAATTTTG TGCCATGCCC CATTAGCAAC 420 421 CAACTGACCA GTCCCATTGC ACTTCCCCCG GGGGTCACCT TGGCCAGCTC TCTGGGTTTA 480 481 CCCTCTACTG GACCCCTGAA TAGTCAAATG ACCAGCCCCA TGGCTGTTCC CCCGGGGACC 540 541 ACTCTGGCCA GTTCACTGGG TTTGAACTCA ACTGGTTCCC TGACAACCAA CAGCCGGTTG 600 601 GTAGGCCCTC CGGCTGTATC TCAGAGTGGC CCCATCATGG CTCCCCTGGC AGGCACAGTG 660 661 GCAGTCTCTC TGAGTAGCCC CCTGGTCTCC TCCACTGCCC CTCTAGGTGT TTCTCAGAAC 720 721 ATACTGCCCA ATCCCATAAA CAACGTAGGG CTGTCAGAGG CGCCAAGGGT GCGGCTGACA 780 781 GAGCCAACCC GAGGAAACCT CTCTGGAACC TCAGCAGGAC CAGCTCCCGC CTCCAAAGTC 840 841 AATGATGCCC GAGGTTCACG CGTGGCAGAA CAGTCTCGGA AGAATGCCCC AGAGACGGAG 900 901 CGGAAGGCGA CCTCCCGAAA GTCTAACAAG TTACCTGACA GCTGCCGAGA CTCAAAACAA 960 961 CTAGCCCGTG AGAGGCTAGT AGGGGAGATC GCCTTCCAGC TAGACCGAAG AATCCTGTCC 1020 1021 AGCATCTTCC CAGAGCGTGT GCGTCTCTAT GGCTTCACTG TCTCCAACAT TCCAGAGAAG 1080 1081 ATCATCCAGG CCTCCCTAAA CCCCAGTAGC CACAAGTTGG ATGAGGACCT ATGCCAGACA 1140 1141 CTCACACAGC GTTATGTGAG CATCATGAAC AGGCTGCAGA GCCTAGGCTA CAATGGACGG 1200 1201 GTGCATCCAG CACTGACAGA GCAGCTGGTG AACGCATATG GCATCTTGCG TGAGAGGCCT 1260 1261 GAGCTGGCAG CATCTGAAGG TGGTACCTAC AGTGTGGACT TCTTGCAGCG TGTGCTGGTG 1320 1321 GAGACTGTGC ACCCCAGCAT GCTCACCGAC GCCCTCCTGC TGCTCTCCTG CCTCAACCAG 1380 1381 CTGTCCCATG ATGATGGCAA GCCTATGTTC ATCTGGTAA 1419 |
▼ ANNOTATION
| Physicochemical | ||||
| Compute pI/Mw | AAindex | |||
| Localization | ||||
| COMPARTMENTS | ||||
| Expression | ||||
| ArrayExpress | TISSUES | |||
| Element | ||||
| miRWalk | ||||
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Ova-0121 | Ovis aries | 85.71 | 1e-106 | 336 |
| LLPS-Mal-4425 | Mandrillus leucophaeus | 85.22 | 4e-107 | 337 |
| LLPS-Paa-0899 | Papio anubis | 85.22 | 3e-107 | 337 |
| LLPS-Maf-0899 | Macaca fascicularis | 85.22 | 2e-108 | 338 |
| LLPS-Cea-4035 | Cercocebus atys | 85.22 | 3e-107 | 337 |
| LLPS-Mam-3712 | Macaca mulatta | 85.22 | 5e-107 | 337 |
| LLPS-Man-1642 | Macaca nemestrina | 85.22 | 2e-106 | 335 |
| LLPS-Mum-3210 | Mus musculus | 85.21 | 0.0 | 674 |
| LLPS-Poa-2660 | Pongo abelii | 85.19 | 3e-99 | 317 |
| LLPS-Mup-3542 | Mustela putorius furo | 84.73 | 1e-100 | 320 |
| LLPS-Chs-4630 | Chlorocebus sabaeus | 84.73 | 6e-107 | 337 |
| LLPS-Nol-4004 | Nomascus leucogenys | 84.73 | 1e-107 | 336 |
| LLPS-Cas-3518 | Carlito syrichta | 83.58 | 3e-103 | 327 |
| LLPS-Aim-0372 | Ailuropoda melanoleuca | 83.25 | 1e-104 | 328 |
| LLPS-Caj-3695 | Callithrix jacchus | 82.76 | 3e-101 | 322 |
| LLPS-Pat-2546 | Pan troglodytes | 82.27 | 3e-99 | 317 |
| LLPS-Mea-0261 | Mesocricetus auratus | 82.19 | 0.0 | 640 |
| LLPS-Aon-0981 | Aotus nancymaae | 81.77 | 1e-102 | 325 |
| LLPS-Pap-4679 | Pan paniscus | 81.77 | 6e-99 | 316 |
| LLPS-Otg-4023 | Otolemur garnettii | 81.04 | 8e-104 | 328 |
| LLPS-Tut-1745 | Tursiops truncatus | 79.44 | 1e-96 | 307 |
| LLPS-Ora-1708 | Ornithorhynchus anatinus | 74.47 | 9e-79 | 257 |
| LLPS-Hos-2092 | Homo sapiens | 74.24 | 1e-98 | 315 |
| LLPS-Fud-1142 | Fukomys damarensis | 71.01 | 0.0 | 544 |
| LLPS-Orc-3607 | Oryctolagus cuniculus | 70.53 | 2e-31 | 130 |
| LLPS-Eqc-3986 | Equus caballus | 70.35 | 0.0 | 561 |
| LLPS-Loa-0727 | Loxodonta africana | 67.13 | 0.0 | 535 |
| LLPS-Cap-1649 | Cavia porcellus | 66.75 | 1e-154 | 453 |
| LLPS-Urm-2161 | Ursus maritimus | 66.11 | 1e-180 | 520 |
| LLPS-Rhb-4144 | Rhinopithecus bieti | 65.7 | 1e-54 | 196 |
| LLPS-Sah-0719 | Sarcophilus harrisii | 64.29 | 2e-66 | 228 |
| LLPS-Sus-0902 | Sus scrofa | 64.03 | 5e-172 | 498 |
| LLPS-Bot-4103 | Bos taurus | 61.57 | 3e-170 | 493 |
| LLPS-Gog-4065 | Gorilla gorilla | 57.4 | 2e-59 | 207 |
| LLPS-Anc-3438 | Anolis carolinensis | 53.33 | 2e-37 | 139 |
| LLPS-Mod-2419 | Monodelphis domestica | 50.4 | 4e-116 | 357 |
| LLPS-Caf-4625 | Canis familiaris | 48.68 | 9e-48 | 170 |