LLPS-Ran-1971
Elavl3
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | ELAV-like protein |
Gene Name: | Elavl3, rCG_31703 |
Ensembl Gene: | ENSRNOG00000013752.5 |
Ensembl Protein: | ENSRNOP00000018416.4 |
Organism: | Rattus norvegicus |
Taxa ID: | 10116 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Stress granule, Postsynaptic density | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSRNOT00000018416.5 | ENSRNOP00000018416.4 |
UniProt | Q76IJ9, Q76IJ9_RAT | |
GeneBank | AABR07073372, AB097198, CH473993 | , BAC41352.1, EDL78241.1 |
RefSeq | NM_172324.1 | NP_758827.1 |
Entrez | 282824 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MVTQILGAME SQVGGGPAGP ALPNGPLLGT NGATDDSKTN LIVNYLPQNM TQDEFKSLFG 60 61 SIGDIESCKL VRDKITGQSL GYGFVNYSDP NDADKAINTL NGLKLQTKTI KVSYARPSSA 120 121 SIRDANLYVS GLPKTMSQKE MEQLFSQYGR IITSRILLDQ ATGVSRGVGF IRFDKRIEAE 180 181 EAIKGLNGQK PLGAAEPITV KFANNPSQKT GQALLTHLYQ SSARRYAGPL HHQTQRFRLD 240 241 NLLNMAYGVK SPLSLIARFS PIAIDGMSGL AGVGLSGGAA GAGWCIFVYN LSPEADESVL 300 301 WQLFGPFGAV TNVKVIRDFT TNKCKGFGFV TMTNYDEAAM AIASLNGYRL GERVLQVSFK 360 361 TSKQHKA 367 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGTCACTC AGATACTGGG GGCCATGGAG TCTCAGGTTG GGGGGGGGCC GGCCGGCCCG 60 61 GCCCTGCCCA ACGGGCCACT CCTTGGGACA AACGGAGCCA CTGACGACAG CAAGACCAAC 120 121 CTCATCGTCA ACTACCTACC CCAGAACATG ACGCAGGACG AGTTCAAGAG TCTCTTCGGC 180 181 AGCATTGGGG ACATTGAATC CTGCAAGTTG GTTCGGGATA AGATCACAGG ACAGAGCCTA 240 241 GGCTATGGGT TTGTGAACTA CTCTGACCCC AATGATGCAG ACAAAGCCAT CAACACTCTC 300 301 AATGGCCTCA AACTGCAGAC CAAGACCATC AAGGTGTCCT ATGCACGTCC CAGTTCTGCC 360 361 TCTATCCGGG ATGCCAACCT GTACGTCAGT GGCCTCCCCA AGACCATGAG CCAGAAGGAG 420 421 ATGGAGCAGC TCTTCTCCCA GTACGGCCGG ATCATCACTT CCAGAATCCT GCTGGACCAG 480 481 GCCACAGGTG TCTCTCGGGG TGTGGGATTC ATCCGCTTTG ACAAGAGGAT CGAGGCAGAA 540 541 GAGGCTATCA AAGGACTGAA TGGGCAGAAG CCACTGGGTG CTGCTGAGCC TATCACGGTC 600 601 AAGTTTGCAA ACAACCCAAG TCAGAAGACA GGGCAGGCCC TGCTCACCCA CCTGTACCAG 660 661 TCCTCTGCCA GGCGCTACGC TGGTCCCCTG CATCATCAGA CACAGCGCTT CCGGCTGGAC 720 721 AATTTGCTCA ACATGGCCTA CGGAGTCAAG AGTCCCCTGT CGCTCATCGC CAGGTTCTCC 780 781 CCAATCGCCA TCGATGGCAT GAGTGGCCTG GCAGGCGTTG GCTTGTCTGG AGGCGCTGCA 840 841 GGCGCTGGCT GGTGCATCTT CGTGTACAAC CTGTCCCCAG AAGCGGATGA GAGTGTGCTG 900 901 TGGCAGCTTT TCGGACCCTT TGGGGCAGTC ACCAATGTCA AGGTCATCCG AGATTTCACC 960 961 ACCAACAAGT GCAAGGGTTT CGGCTTCGTC ACCATGACCA ACTACGATGA GGCCGCCATG 1020 1021 GCCATCGCCA GCCTCAATGG CTATCGCCTG GGCGAGCGTG TGCTGCAGGT GTCCTTCAAG 1080 1081 ACCAGCAAGC AGCACAAGGC CTGA 1104 |
▼ ANNOTATION
Physicochemical | ||||
Compute pI/Mw | AAindex |
Localization | ||||
COMPARTMENTS |
Expression | ||||
TISSUES |
Element | ||||
miRWalk | RAID | microRNA.org |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Mum-4471 | Mus musculus | 100.0 | 0.0 | 667 |
LLPS-Mea-2161 | Mesocricetus auratus | 100.0 | 0.0 | 660 |
LLPS-Mal-0546 | Mandrillus leucophaeus | 100.0 | 1e-57 | 189 |
LLPS-Caj-3213 | Callithrix jacchus | 99.46 | 0.0 | 663 |
LLPS-Cea-3877 | Cercocebus atys | 99.46 | 0.0 | 663 |
LLPS-Paa-3350 | Papio anubis | 99.46 | 0.0 | 663 |
LLPS-Rhb-3286 | Rhinopithecus bieti | 99.46 | 0.0 | 663 |
LLPS-Hos-1852 | Homo sapiens | 99.46 | 0.0 | 663 |
LLPS-Pat-4416 | Pan troglodytes | 99.46 | 0.0 | 663 |
LLPS-Pap-2502 | Pan paniscus | 99.46 | 0.0 | 663 |
LLPS-Ict-0833 | Ictidomys tridecemlineatus | 99.46 | 0.0 | 663 |
LLPS-Gog-3226 | Gorilla gorilla | 99.45 | 0.0 | 657 |
LLPS-Sus-2570 | Sus scrofa | 99.18 | 0.0 | 664 |
LLPS-Fec-4627 | Felis catus | 99.18 | 0.0 | 664 |
LLPS-Man-0114 | Macaca nemestrina | 99.18 | 0.0 | 661 |
LLPS-Caf-1554 | Canis familiaris | 99.18 | 0.0 | 664 |
LLPS-Chs-0542 | Chlorocebus sabaeus | 99.13 | 1e-146 | 422 |
LLPS-Mup-2728 | Mustela putorius furo | 98.91 | 0.0 | 662 |
LLPS-Ova-4186 | Ovis aries | 98.91 | 0.0 | 661 |
LLPS-Loa-1738 | Loxodonta africana | 98.9 | 0.0 | 653 |
LLPS-Myl-3491 | Myotis lucifugus | 98.63 | 0.0 | 655 |
LLPS-Dio-4116 | Dipodomys ordii | 98.63 | 0.0 | 654 |
LLPS-Bot-0583 | Bos taurus | 97.0 | 0.0 | 641 |
LLPS-Eqc-0612 | Equus caballus | 96.98 | 0.0 | 636 |
LLPS-Aim-3082 | Ailuropoda melanoleuca | 95.88 | 0.0 | 622 |
LLPS-Sah-3148 | Sarcophilus harrisii | 94.35 | 3e-144 | 415 |
LLPS-Nol-0716 | Nomascus leucogenys | 94.31 | 1e-60 | 197 |
LLPS-Urm-1345 | Ursus maritimus | 94.14 | 2e-176 | 501 |
LLPS-Aon-4504 | Aotus nancymaae | 91.84 | 0.0 | 606 |
LLPS-Fud-4091 | Fukomys damarensis | 87.74 | 0.0 | 592 |
LLPS-Lac-2202 | Latimeria chalumnae | 87.45 | 1e-163 | 466 |
LLPS-Asm-1953 | Astyanax mexicanus | 86.92 | 0.0 | 616 |
LLPS-Leo-2923 | Lepisosteus oculatus | 86.92 | 0.0 | 621 |
LLPS-Orn-2180 | Oreochromis niloticus | 86.26 | 0.0 | 605 |
LLPS-Dar-0616 | Danio rerio | 86.14 | 0.0 | 600 |
LLPS-Gaa-3079 | Gasterosteus aculeatus | 86.1 | 0.0 | 605 |
LLPS-Scf-2877 | Scleropages formosus | 85.88 | 0.0 | 566 |
LLPS-Orl-4115 | Oryzias latipes | 85.83 | 0.0 | 605 |
LLPS-Poa-4352 | Pongo abelii | 85.71 | 5e-149 | 429 |
LLPS-Pes-3462 | Pelodiscus sinensis | 84.73 | 0.0 | 575 |
LLPS-Fia-1134 | Ficedula albicollis | 84.73 | 0.0 | 575 |
LLPS-Anp-1528 | Anas platyrhynchos | 84.73 | 0.0 | 575 |
LLPS-Gaga-0610 | Gallus gallus | 84.73 | 0.0 | 575 |
LLPS-Tag-0591 | Taeniopygia guttata | 84.73 | 0.0 | 575 |
LLPS-Icp-2133 | Ictalurus punctatus | 84.68 | 0.0 | 573 |
LLPS-Xim-0935 | Xiphophorus maculatus | 84.68 | 0.0 | 573 |
LLPS-Pof-1868 | Poecilia formosa | 84.68 | 0.0 | 573 |
LLPS-Meg-2847 | Meleagris gallopavo | 84.48 | 0.0 | 570 |
LLPS-Maf-1980 | Macaca fascicularis | 84.43 | 0.0 | 573 |
LLPS-Otg-2742 | Otolemur garnettii | 84.43 | 0.0 | 573 |
LLPS-Orc-1912 | Oryctolagus cuniculus | 84.43 | 0.0 | 575 |
LLPS-Mam-0003 | Macaca mulatta | 84.43 | 0.0 | 573 |
LLPS-Tar-3896 | Takifugu rubripes | 84.38 | 0.0 | 571 |
LLPS-Ten-2344 | Tetraodon nigroviridis | 84.38 | 0.0 | 571 |
LLPS-Anc-0427 | Anolis carolinensis | 84.32 | 0.0 | 577 |
LLPS-Scm-1394 | Scophthalmus maximus | 83.93 | 0.0 | 568 |
LLPS-Mod-3375 | Monodelphis domestica | 83.83 | 0.0 | 567 |
LLPS-Cap-2707 | Cavia porcellus | 83.23 | 0.0 | 566 |
LLPS-Ere-0202 | Erinaceus europaeus | 82.99 | 0.0 | 573 |
LLPS-Tut-0935 | Tursiops truncatus | 82.63 | 0.0 | 557 |
LLPS-Xet-1378 | Xenopus tropicalis | 82.34 | 0.0 | 558 |
LLPS-Cas-1007 | Carlito syrichta | 78.53 | 0.0 | 552 |
LLPS-Ora-0675 | Ornithorhynchus anatinus | 77.31 | 0.0 | 519 |
LLPS-Cii-0462 | Ciona intestinalis | 60.62 | 2e-141 | 414 |
LLPS-Cis-1223 | Ciona savignyi | 59.64 | 5e-135 | 398 |
LLPS-Drm-1012 | Drosophila melanogaster | 57.91 | 1e-131 | 388 |
LLPS-Cae-1561 | Caenorhabditis elegans | 56.0 | 1e-76 | 250 |
LLPS-Arl-1536 | Arabidopsis lyrata | 41.03 | 7e-09 | 61.6 |
LLPS-Brn-0079 | Brassica napus | 39.74 | 4e-08 | 59.3 |
LLPS-Brr-0456 | Brassica rapa | 39.74 | 4e-08 | 59.3 |
LLPS-Art-1123 | Arabidopsis thaliana | 39.74 | 2e-08 | 60.1 |
LLPS-Bro-2304 | Brassica oleracea | 38.46 | 1e-07 | 57.4 |
LLPS-Zyt-0750 | Zymoseptoria tritici | 35.9 | 1e-08 | 60.1 |
LLPS-Tum-0874 | Tuber melanosporum | 35.9 | 1e-08 | 60.8 |
LLPS-Pyt-0650 | Pyrenophora teres | 35.9 | 3e-08 | 59.3 |
LLPS-Phn-1074 | Phaeosphaeria nodorum | 35.9 | 2e-08 | 59.7 |
LLPS-Nef-0476 | Neosartorya fischeri | 33.33 | 1e-07 | 57.4 |
LLPS-Cog-0774 | Colletotrichum gloeosporioides | 28.07 | 1e-29 | 122 |
LLPS-Cogr-0174 | Colletotrichum graminicola | 28.07 | 2e-29 | 122 |
LLPS-Coo-0139 | Colletotrichum orbiculare | 27.78 | 6e-29 | 120 |
LLPS-Beb-1010 | Beauveria bassiana | 27.6 | 1e-28 | 119 |
LLPS-Fuv-0318 | Fusarium verticillioides | 27.19 | 1e-28 | 119 |
LLPS-Asf-0643 | Aspergillus flavus | 27.06 | 5e-29 | 120 |
LLPS-Aso-0257 | Aspergillus oryzae | 27.06 | 5e-29 | 120 |