LLPS-Pot-2784
POPTR_001G116900
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Gene Name: | POPTR_001G116900 |
| Ensembl Gene: | POPTR_001G116900v3 |
| Ensembl Protein: | PNT54006 |
| Organism: | Populus trichocarpa |
| Taxa ID: | 3694 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | PNT54006 | PNT54006 |
| Ensembl | PNT54004 | PNT54004 |
| Ensembl | PNT54003 | PNT54003 |
| Ensembl | PNT54005 | PNT54005 |
| UniProt | A0A2K2BW44, A0A2K2BW44_POPTR | |
| GeneBank | CM009290 | PNT54006.1, RQO84767.1, PNT54005.1, PNT54003.1, RQO84768.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSLSDSDSSS SYGSDYKNLR QISRERLLHE MLRSAKTGNS KSTWKVLIMD RLTVKIMSYS 60 61 CKMADITQEG VSLVEDIYRR RQPLPSMDAI YFIQPTKENV IMFLSDMSGK SPLYKKAFVF 120 121 FSSPISRELV SHIKKDSSVL TRIGALREMN LEYFAIDSQG FITDNERALE ELFVDEEDSR 180 181 KGDACLNVMA SRIATVFASL REFPFVRYRA AKSLDVTTMT TFRDLIPTKL AARIWDCLIQ 240 241 YKQKTEHFPQ TETCELLILD RSIDQIAPII HEWTYDAMCH DLLNMEGNKY VHEVLSKAGG 300 301 PPEKKDVLLE EHDPVWLELR HAHIADASER LHEKMTNFVS KNKAAKIQHG SRDGGELSTR 360 361 DLQQMVQALP QYSEQIDKIS LHVEIAGKIN RIIRESGLRE LGQLEQDLVF GDAGMTDVIK 420 421 FLTTKEDATR ENKLRLLMIL AAIYPEKFEG EEGHNIMKVV RLPQDDMNAV NNMRLLAVAS 480 481 ETKKSSTGAF SLKFDIHKKK RAARKDRTGA EETTWQLSRF YPMIEELIDK LNKGELSKDE 540 541 YPCMNDPSPT FHGTSQSTPM HQAPAPHSMR SRRTPTWARP RNSDDGYSSD SVLRHASSDF 600 601 KKMGQRIFVF IVGGATRSEL RVCHKLTSKL QREVILGSSS LDDPPHFITK LKLLTANELS 660 661 LDDLQI 666 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAACTTTG TTTGTCATTC TAAATTTACC CATTGTTCAG GTTTGTTGCA TGAAATGCTT 60 61 CGATCAGCCA AAACAGGGAA TTCAAAATCA ACTTGGAAGG TACTTATCAT GGACAGACTT 120 121 ACTGTGAAGA TCATGTCATA CTCATGCAAG ATGGCTGATA TCACACAGGA AGGAGTTTCA 180 181 TTGGTAGAAG ACATATACAG ACGAAGGCAG CCATTGCCCT CCATGGATGC TATATACTTC 240 241 ATCCAACCAA CAAAAGAGAA TGTTATAATG TTCTTGTCAG ACATGTCTGG GAAATCGCCT 300 301 TTATACAAAA AGGCATTTGT TTTCTTCAGT TCCCCTATTT CAAGAGAACT GGTTTCTCAT 360 361 ATCAAGAAAG ATTCAAGTGT ATTAACTCGT ATAGGGGCAT TGAGAGAGAT GAATTTGGAG 420 421 TATTTTGCTA TAGATAGCCA GGGTTTTATT ACTGATAATG AAAGGGCTTT AGAGGAACTT 480 481 TTTGTGGATG AGGAGGATTC TCGCAAAGGT GATGCGTGTT TGAATGTGAT GGCTTCTCGC 540 541 ATTGCTACAG TTTTTGCTTC GCTTCGGGAA TTTCCTTTTG TGCGATATCG TGCCGCCAAG 600 601 TCCCTTGATG TAACAACAAT GACGACTTTC CGTGATTTAA TTCCTACAAA ACTTGCTGCT 660 661 AGAATTTGGG ATTGTCTGAT CCAATATAAG CAAAAGACTG AACACTTCCC TCAGACAGAA 720 721 ACATGTGAAC TGCTTATCCT GGATAGATCT ATAGATCAGA TTGCTCCTAT CATACACGAG 780 781 TGGACATATG ATGCCATGTG TCATGATCTA TTGAATATGG AGGGAAACAA ATATGTGCAT 840 841 GAGGTGCTCA GCAAAGCTGG TGGTCCACCT GAAAAAAAGG ATGTTCTTTT GGAGGAACAT 900 901 GATCCTGTCT GGCTTGAGCT TCGGCATGCA CACATAGCAG ATGCTAGTGA GCGGCTGCAC 960 961 GAGAAGATGA CCAACTTCGT ATCAAAAAAT AAAGCAGCCA AAATCCAACA TGGTTCAAGA 1020 1021 GATGGTGGTG AACTTTCTAC AAGGGACTTG CAACAGATGG TTCAAGCATT GCCTCAATAC 1080 1081 AGTGAGCAGA TTGACAAGAT CTCCCTCCAT GTGGAGATTG CTGGAAAAAT TAATAGAATT 1140 1141 ATCAGGGAGT CGGGGCTTCG AGAGCTTGGG CAACTAGAGC AGGACCTGGT TTTTGGAGAT 1200 1201 GCAGGAATGA CAGATGTTAT CAAATTTTTG ACTACAAAAG AGGATGCAAC TCGTGAAAAT 1260 1261 AAGTTGCGGT TGTTGATGAT TCTTGCAGCC ATTTATCCTG AGAAGTTTGA GGGTGAAGAA 1320 1321 GGTCATAATA TAATGAAGGT GGTAAGATTA CCGCAGGATG ACATGAATGC TGTGAATAAT 1380 1381 ATGAGATTGC TTGCGGTGGC ATCAGAGACC AAAAAAAGTT CAACTGGTGC TTTCTCCCTG 1440 1441 AAGTTTGATA TTCATAAGAA GAAGCGCGCT GCCAGGAAAG ACCGCACTGG TGCTGAAGAA 1500 1501 ACAACATGGC AGTTGTCTCG CTTTTACCCC ATGATAGAGG AACTTATTGA TAAACTTAAC 1560 1561 AAAGGAGAAC TCTCCAAGGA TGAATATCCA TGCATGAATG ACCCAAGCCC AACTTTCCAT 1620 1621 GGGACATCCC AGTCTACACC AATGCATCAA GCTCCAGCAC CCCATTCAAT GAGATCAAGA 1680 1681 CGGACTCCTA CATGGGCTCG ACCACGGAAC TCTGATGATG GTTATTCAAG TGATTCTGTT 1740 1741 CTAAGACATG CATCTAGTGA TTTCAAAAAG ATGGGCCAGC GTATTTTTGT ATTCATCGTA 1800 1801 GGTGGAGCTA CAAGATCTGA GCTAAGAGTT TGCCACAAGC TTACAAGCAA GTTACAGAGG 1860 1861 GAAGTAATTT TGGGTTCTTC GAGTCTGGAT GATCCTCCAC ATTTTATTAC GAAGCTGAAA 1920 1921 CTGCTGACAG CAAATGAACT TTCACTGGAC GATCTACAGA TATAA 1965 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Coc-0746 | Corchorus capsularis | 85.65 | 0.0 | 1156 |
| LLPS-Thc-0401 | Theobroma cacao | 85.41 | 0.0 | 1179 |
| LLPS-Gor-0614 | Gossypium raimondii | 84.79 | 0.0 | 1160 |
| LLPS-Prp-0139 | Prunus persica | 83.23 | 0.0 | 1152 |
| LLPS-Brr-2818 | Brassica rapa | 82.72 | 0.0 | 1138 |
| LLPS-Bro-1254 | Brassica oleracea | 82.6 | 0.0 | 1141 |
| LLPS-Brn-1707 | Brassica napus | 82.6 | 0.0 | 1141 |
| LLPS-Cus-0896 | Cucumis sativus | 82.15 | 0.0 | 1137 |
| LLPS-Art-0927 | Arabidopsis thaliana | 82.14 | 0.0 | 1112 |
| LLPS-Arl-2584 | Arabidopsis lyrata | 81.8 | 0.0 | 1121 |
| LLPS-Viv-1727 | Vitis vinifera | 81.47 | 0.0 | 1114 |
| LLPS-Glm-2387 | Glycine max | 81.41 | 0.0 | 1130 |
| LLPS-Met-2360 | Medicago truncatula | 80.67 | 0.0 | 1118 |
| LLPS-Sol-0036 | Solanum lycopersicum | 80.55 | 0.0 | 1117 |
| LLPS-Phv-2142 | Phaseolus vulgaris | 80.25 | 0.0 | 1087 |
| LLPS-Hea-1543 | Helianthus annuus | 76.15 | 0.0 | 1011 |
| LLPS-Mua-0963 | Musa acuminata | 75.91 | 0.0 | 1038 |
| LLPS-Sei-0939 | Setaria italica | 74.12 | 0.0 | 996 |
| LLPS-Vir-2049 | Vigna radiata | 73.68 | 0.0 | 1035 |
| LLPS-Sob-2323 | Sorghum bicolor | 73.51 | 0.0 | 999 |
| LLPS-Brd-0725 | Brachypodium distachyon | 72.67 | 0.0 | 974 |
| LLPS-Ori-0659 | Oryza indica | 72.41 | 0.0 | 983 |
| LLPS-Orbr-2352 | Oryza brachyantha | 72.34 | 0.0 | 983 |
| LLPS-Tra-0022 | Triticum aestivum | 71.82 | 0.0 | 964 |
| LLPS-Zem-1942 | Zea mays | 70.98 | 0.0 | 976 |
| LLPS-Amt-0837 | Amborella trichopoda | 70.34 | 0.0 | 948 |
| LLPS-Org-1384 | Oryza glaberrima | 69.66 | 0.0 | 939 |
| LLPS-Orm-1667 | Oryza meridionalis | 69.66 | 0.0 | 949 |
| LLPS-Dac-0825 | Daucus carota | 69.17 | 0.0 | 889 |
| LLPS-Orr-0204 | Oryza rufipogon | 68.8 | 0.0 | 913 |
| LLPS-Nia-0087 | Nicotiana attenuata | 67.93 | 0.0 | 941 |
| LLPS-Hov-1053 | Hordeum vulgare | 67.85 | 0.0 | 898 |
| LLPS-Tru-1073 | Triticum urartu | 66.92 | 0.0 | 903 |
| LLPS-Orp-2088 | Oryza punctata | 66.46 | 0.0 | 879 |
| LLPS-Sot-0603 | Solanum tuberosum | 66.28 | 0.0 | 721 |
| LLPS-Orb-2094 | Oryza barthii | 65.85 | 0.0 | 857 |
| LLPS-Mae-0084 | Manihot esculenta | 65.54 | 0.0 | 879 |
| LLPS-Lep-0431 | Leersia perrieri | 64.75 | 0.0 | 881 |
| LLPS-Orni-0220 | Oryza nivara | 64.43 | 0.0 | 856 |
| LLPS-Ors-0884 | Oryza sativa | 62.35 | 0.0 | 675 |
| LLPS-Orgl-1062 | Oryza glumaepatula | 57.24 | 2e-91 | 303 |
| LLPS-Sem-0077 | Selaginella moellendorffii | 54.88 | 0.0 | 693 |
| LLPS-Php-1995 | Physcomitrella patens | 53.85 | 0.0 | 727 |
| LLPS-Osl-0416 | Ostreococcus lucimarinus | 36.64 | 4e-112 | 357 |
| LLPS-Meg-0765 | Meleagris gallopavo | 30.21 | 3e-64 | 226 |
| LLPS-Cas-0497 | Carlito syrichta | 30.08 | 1e-64 | 228 |
| LLPS-Drm-1330 | Drosophila melanogaster | 29.94 | 2e-68 | 241 |
| LLPS-Chr-1004 | Chlamydomonas reinhardtii | 29.82 | 7e-85 | 286 |
| LLPS-Ten-2152 | Tetraodon nigroviridis | 29.79 | 2e-72 | 251 |
| LLPS-Cae-0915 | Caenorhabditis elegans | 29.75 | 1e-76 | 263 |
| LLPS-Xim-1150 | Xiphophorus maculatus | 29.71 | 3e-79 | 269 |
| LLPS-Otg-3468 | Otolemur garnettii | 29.57 | 4e-75 | 259 |
| LLPS-Asm-0124 | Astyanax mexicanus | 29.57 | 2e-77 | 265 |
| LLPS-Tar-3130 | Takifugu rubripes | 29.53 | 2e-67 | 238 |
| LLPS-Bot-0576 | Bos taurus | 29.27 | 6e-74 | 255 |
| LLPS-Gog-1411 | Gorilla gorilla | 29.22 | 5e-73 | 254 |
| LLPS-Loa-0491 | Loxodonta africana | 29.18 | 6e-71 | 247 |
| LLPS-Mup-2757 | Mustela putorius furo | 29.14 | 2e-71 | 249 |
| LLPS-Scf-1546 | Scleropages formosus | 29.12 | 4e-75 | 258 |
| LLPS-Icp-1477 | Ictalurus punctatus | 29.1 | 3e-79 | 270 |
| LLPS-Pof-0218 | Poecilia formosa | 29.08 | 1e-78 | 268 |
| LLPS-Orc-0780 | Oryctolagus cuniculus | 29.01 | 3e-71 | 248 |
| LLPS-Mam-3021 | Macaca mulatta | 28.96 | 4e-72 | 250 |
| LLPS-Dio-1180 | Dipodomys ordii | 28.96 | 2e-74 | 256 |
| LLPS-Tag-1471 | Taeniopygia guttata | 28.93 | 5e-70 | 244 |
| LLPS-Cap-3673 | Cavia porcellus | 28.92 | 2e-72 | 251 |
| LLPS-Orn-0000 | Oreochromis niloticus | 28.87 | 1e-72 | 252 |
| LLPS-Caf-1382 | Canis familiaris | 28.85 | 2e-70 | 246 |
| LLPS-Mea-2276 | Mesocricetus auratus | 28.85 | 2e-70 | 246 |
| LLPS-Aon-3960 | Aotus nancymaae | 28.85 | 5e-70 | 246 |
| LLPS-Scm-0306 | Scophthalmus maximus | 28.81 | 7e-75 | 258 |
| LLPS-Fec-0624 | Felis catus | 28.81 | 4e-71 | 248 |
| LLPS-Anc-0919 | Anolis carolinensis | 28.81 | 3e-62 | 223 |
| LLPS-Chs-1406 | Chlorocebus sabaeus | 28.81 | 4e-72 | 250 |
| LLPS-Maf-1997 | Macaca fascicularis | 28.81 | 4e-72 | 250 |
| LLPS-Mal-0264 | Mandrillus leucophaeus | 28.81 | 5e-70 | 244 |
| LLPS-Nol-2083 | Nomascus leucogenys | 28.8 | 2e-68 | 241 |
| LLPS-Miv-0419 | Microbotryum violaceum | 28.78 | 6e-60 | 220 |
| LLPS-Man-3597 | Macaca nemestrina | 28.78 | 2e-67 | 239 |
| LLPS-Cea-0045 | Cercocebus atys | 28.78 | 1e-67 | 239 |
| LLPS-Sus-1422 | Sus scrofa | 28.75 | 2e-70 | 248 |
| LLPS-Pap-0608 | Pan paniscus | 28.73 | 5e-67 | 238 |
| LLPS-Pat-4419 | Pan troglodytes | 28.73 | 5e-67 | 238 |
| LLPS-Poa-2844 | Pongo abelii | 28.73 | 2e-70 | 246 |
| LLPS-Fud-0903 | Fukomys damarensis | 28.73 | 4e-70 | 245 |
| LLPS-Ova-1492 | Ovis aries | 28.73 | 3e-69 | 244 |
| LLPS-Aim-1700 | Ailuropoda melanoleuca | 28.69 | 7e-70 | 244 |
| LLPS-Ict-0541 | Ictidomys tridecemlineatus | 28.66 | 1e-66 | 236 |
| LLPS-Caj-3696 | Callithrix jacchus | 28.62 | 1e-65 | 233 |
| LLPS-Dar-0231 | Danio rerio | 28.59 | 3e-78 | 267 |
| LLPS-Urm-2116 | Ursus maritimus | 28.57 | 1e-69 | 243 |
| LLPS-Rhb-2086 | Rhinopithecus bieti | 28.55 | 1e-63 | 228 |
| LLPS-Mod-1192 | Monodelphis domestica | 28.53 | 3e-64 | 229 |
| LLPS-Paa-1336 | Papio anubis | 28.49 | 2e-69 | 243 |
| LLPS-Lac-0013 | Latimeria chalumnae | 28.46 | 5e-68 | 239 |
| LLPS-Gaga-0996 | Gallus gallus | 28.46 | 2e-73 | 254 |
| LLPS-Hos-0432 | Homo sapiens | 28.44 | 2e-69 | 244 |
| LLPS-Tut-0296 | Tursiops truncatus | 28.44 | 4e-72 | 251 |
| LLPS-Eqc-2247 | Equus caballus | 28.42 | 9e-72 | 249 |
| LLPS-Sah-0213 | Sarcophilus harrisii | 28.41 | 2e-69 | 243 |
| LLPS-Pes-1662 | Pelodiscus sinensis | 28.39 | 7e-67 | 237 |
| LLPS-Ora-1414 | Ornithorhynchus anatinus | 28.33 | 2e-71 | 249 |
| LLPS-Mum-0013 | Mus musculus | 28.31 | 2e-71 | 249 |
| LLPS-Ran-1865 | Rattus norvegicus | 28.31 | 2e-71 | 249 |
| LLPS-Fia-2511 | Ficedula albicollis | 28.3 | 2e-68 | 240 |
| LLPS-Leo-2439 | Lepisosteus oculatus | 28.29 | 2e-72 | 251 |
| LLPS-Pug-0803 | Puccinia graminis | 28.15 | 7e-61 | 222 |
| LLPS-Gaa-1431 | Gasterosteus aculeatus | 28.11 | 8e-76 | 260 |
| LLPS-Gas-0372 | Galdieria sulphuraria | 28.07 | 1e-70 | 254 |
| LLPS-Myl-3172 | Myotis lucifugus | 27.93 | 5e-70 | 245 |
| LLPS-Xet-0649 | Xenopus tropicalis | 27.88 | 7e-69 | 242 |
| LLPS-Anp-1824 | Anas platyrhynchos | 27.64 | 1e-61 | 222 |
| LLPS-Orl-1012 | Oryzias latipes | 27.61 | 1e-69 | 244 |
| LLPS-Cii-0627 | Ciona intestinalis | 27.22 | 9e-67 | 236 |