LLPS-Pot-2630
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Ensembl Gene: | POPTR_006G081800v3 |
| Ensembl Protein: | PNT30441 |
| Organism: | Populus trichocarpa |
| Taxa ID: | 3694 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MLRLRAFRPS NDKIVKIQLH PTHPWLVTAD ASDRVSVWNW EHRQVIYELK AGGVDERRLV 60 61 GAKLEKLAEG ESEPRGKSTE AMRGGSVQQV NFYDDDVRFW QLWRNRSAAA EAPSAVSNVT 120 121 SAFASPAPST KGRHFLVICC VNKAIFLDLV TMRGRDVPKQ ELDNNMEFLC RSTAGDGPPL 180 181 VAFGGSDGVI RVLSMISWTL VRRYTGGHKG SISCLMTFMA SSGELRFVLH LGSLLLGANS 240 241 VLVPFINTGH SMGRHIVLSR LSSGLGYVEW TLGFGVESCG NPEFNGGFPI YPLIGALLVS 300 301 GGSDGLLVLW SADHGQDSRE LVPKLSLKAH DGGVVAVELS RVIGGAPQLI TIGADKTLAI 360 361 WDTISFKELR RIKPVPKLAC HSVASWCHPR APNLDILTCV KDSHIWAIEH PTYSALTRPL 420 421 CELSSLIPPQ ALAPNKKLRV YCMVAHPLQP HLVATGTNIG VIVSEFDARS IPAVAPIPTP 480 481 TGNREHSAIY VVERELKLLN FQLSNAANPS LGSNGSLSET GKYRGDSAEP LHVKQMKKHI 540 541 STPVPHDSYS VLSVSSSGKY LAIVWPDIPY FTIYKVSDWS VVDSGSARLL AWDTCRDRFA 600 601 ILESALPPRM PIIPKGGSSR KAKEAAAAAA QAAAVAASAA SAASVQVRIL LDDGTSNILM 660 661 RSIDGRSEPV IGLHGGALLG VAYRTSRRIS PVAATAISTI QSMPLSGFGS GGLSSFTTLD 720 721 DGFNSHKSPA EAAPQNFQLY SWETFQPVGG LLPHPEWTAW DQTVEYCAFA YQHYIVISSL 780 781 RPQYRYLGDV AIPYATGAVW HRRQLFVATP TTIDTLNNTI PIEVLDYSIT MDYHRGYWRW 840 841 QSEHLKVIPF LVLEATGLAH KHEQKACSII MALSWSTYIL SPLDAGVAAI DIETRKRKEE 900 901 MKMKEAQARA VAEHGDLALI AVDGLQSATQ ERIPLRPPML QVVRLASFQH APSVPPFLTL 960 961 PKQTKVDGDD SAMPIEEKKV NEIAVGGGGV SVAVTRFPTE QKRPVGPLVV VGVRDGVLWL 1020 1021 IDRYMCAHAL SLSHPGIRCR CLAAYGDAVS AVKWASRLGR EHHDDLAQFM MGMGYATEAL 1080 1081 HLPGISKRLE FDLAMQSNDL KRALQCLLTM SNSRDIGQDG IGLDLNDILN ITAKKENIVE 1140 1141 AVQGIVKFAR EFLDLIDAAD ATAQVDIARE ALKRLAAAGS VKGALQGHEL RRLALCLANH 1200 1201 GELTRLNGLV SNLISAGLGR EAAFSAAVLG DNALMEKSWQ DTGMLAEAVL HAHAHGRPTL 1260 1261 KNLVQAWNKM LQKEVDHAPS QKIDAASAFL ASLEEPKLTS LAEAGKKPPI EILPPGMPSL 1320 1321 SALITTQKKL TPGIQSSQQK PLQLEGPPTA TPEAVIVSAA TTATSEAPED ASAATTTTSA 1380 1381 ATENAPPSTT PEAGSSPLPS EASKPTVDDK APTSSPGSNS DQIAPVESIP ETIASDLALP 1440 1441 PQIPDNQGAS VPASTTLPMS DVLG 1464 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCTGCGAT TAAGAGCATT CAGACCCAGC AATGATAAGA TCGTAAAGAT TCAATTGCAT 60 61 CCTACGCATC CATGGCTTGT CACTGCCGAT GCCTCCGATC GCGTCTCCGT TTGGAATTGG 120 121 GAACACCGCC AGGTTATCTA CGAGCTCAAA GCCGGCGGTG TCGACGAGAG ACGTTTGGTC 180 181 GGCGCCAAGT TGGAGAAGCT TGCTGAGGGT GAATCTGAGC CGAGAGGGAA GTCTACCGAA 240 241 GCCATGCGTG GAGGGAGTGT GCAGCAGGTT AACTTTTATG ATGATGATGT CCGGTTTTGG 300 301 CAACTCTGGC GTAATCGGTC AGCCGCTGCG GAGGCTCCTT CCGCCGTCAG CAATGTAACT 360 361 TCAGCATTTG CTTCTCCAGC TCCATCCACT AAAGGGAGAC ACTTCCTTGT CATCTGTTGT 420 421 GTAAACAAAG CCATCTTTCT GGACTTGGTC ACCATGCGTG GTCGTGATGT GCCTAAGCAA 480 481 GAACTTGACA ACAATATGGA GTTTCTCTGC AGATCTACTG CTGGTGATGG TCCTCCACTA 540 541 GTTGCATTTG GTGGATCTGA TGGTGTCATC AGAGTTCTTT CAATGATATC ATGGACGCTT 600 601 GTACGCAGAT ACACTGGAGG TCATAAAGGA TCCATTTCTT GTTTGATGAC CTTCATGGCT 660 661 TCCTCTGGTG AGCTGCGATT TGTGTTACAC CTTGGATCCT TGCTCCTTGG TGCTAATAGT 720 721 GTGCTGGTGC CTTTTATCAA CACCGGACAC TCAATGGGAA GGCATATAGT CCTTTCTAGA 780 781 CTGTCTAGTG GCCTCGGATA TGTGGAGTGG ACCCTCGGTT TTGGTGTTGA GAGTTGCGGC 840 841 AATCCTGAGT TCAATGGAGG TTTTCCTATC TACCCGCTTA TCGGGGCTCT TCTTGTTTCG 900 901 GGTGGTAGTG ATGGTTTACT TGTACTTTGG AGCGCAGACC ATGGTCAAGA TTCACGAGAA 960 961 CTTGTACCCA AGCTAAGCTT AAAAGCACAT GATGGTGGGG TTGTCGCTGT TGAGCTTTCA 1020 1021 AGAGTAATTG GAGGTGCCCC GCAACTTATT ACCATTGGTG CAGATAAAAC ATTAGCTATA 1080 1081 TGGGACACAA TCTCTTTTAA GGAGTTGCGG CGTATTAAAC CTGTTCCAAA ACTTGCATGC 1140 1141 CACAGCGTGG CATCTTGGTG CCACCCTCGA GCTCCAAACC TAGATATCTT AACTTGCGTC 1200 1201 AAAGATTCTC ATATATGGGC CATTGAACAC CCCACCTATT CAGCCCTTAC AAGGCCATTG 1260 1261 TGCGAGCTTT CTTCACTAAT CCCTCCTCAA GCTCTTGCAC CAAACAAGAA ACTTAGGGTT 1320 1321 TATTGCATGG TCGCACATCC TCTACAGCCC CACCTTGTTG CTACTGGAAC CAATATTGGT 1380 1381 GTTATTGTCA GCGAGTTTGA TGCTAGATCT ATTCCAGCTG TGGCTCCCAT ACCAACACCA 1440 1441 ACAGGAAATC GAGAGCATTC TGCCATTTAT GTAGTTGAAA GGGAATTGAA GCTTCTGAAT 1500 1501 TTCCAATTGT CCAACGCAGC AAATCCATCT CTTGGAAGTA ATGGTTCATT ATCTGAAACA 1560 1561 GGAAAGTACA GGGGAGACTC GGCTGAACCA TTACATGTCA AGCAGATGAA AAAGCATATC 1620 1621 AGTACACCTG TTCCACATGA TTCTTATTCA GTTCTTTCTG TAAGCAGTTC AGGGAAATAT 1680 1681 CTCGCAATTG TGTGGCCAGA TATTCCTTAC TTCACTATAT ACAAGGTGAG TGACTGGTCC 1740 1741 GTTGTAGATT CAGGCAGTGC AAGGCTTCTG GCTTGGGATA CCTGTCGTGA TAGGTTTGCT 1800 1801 ATATTGGAAT CTGCATTGCC TCCTAGAATG CCAATAATTC CGAAAGGGGG TTCATCAAGA 1860 1861 AAAGCAAAAG AAGCAGCTGC AGCTGCCGCA CAAGCTGCAG CAGTGGCTGC TTCTGCTGCC 1920 1921 TCTGCTGCCT CTGTGCAAGT TCGTATCTTG CTGGATGACG GAACGTCAAA TATATTAATG 1980 1981 AGGTCCATTG ATGGTCGCAG TGAACCGGTT ATTGGTTTGC ATGGAGGGGC ACTTCTAGGT 2040 2041 GTGGCCTATC GAACATCTCG GAGGATTAGC CCTGTTGCAG CTACAGCTAT TTCAACTATT 2100 2101 CAGTCTATGC CCTTGTCAGG ATTTGGAAGC GGTGGCCTTT CTTCTTTTAC TACTCTCGAT 2160 2161 GATGGATTTA ACTCTCACAA ATCTCCTGCT GAGGCAGCCC CACAAAACTT TCAGCTTTAT 2220 2221 AGTTGGGAAA CTTTTCAACC TGTTGGTGGT CTACTTCCTC ATCCAGAATG GACTGCATGG 2280 2281 GACCAAACAG TTGAGTACTG TGCTTTTGCT TATCAGCACT ATATTGTCAT ATCTTCTTTG 2340 2341 CGGCCTCAAT ACAGATACCT TGGAGATGTT GCTATTCCCT ATGCTACTGG AGCTGTTTGG 2400 2401 CATCGGAGAC AGCTTTTTGT GGCCACACCA ACTACCATTG ATACTTTGAA TAATACTATT 2460 2461 CCCATTGAAG TGCTGGATTA TAGTATTACC ATGGATTATC ATCGAGGCTA CTGGAGATGG 2520 2521 CAAAGTGAAC ATCTTAAAGT GATTCCATTC TTGGTTTTGG AAGCCACTGG CTTGGCCCAC 2580 2581 AAACATGAGC AAAAGGCTTG TTCAATTATC ATGGCTCTTT CATGGAGTAC TTATATACTT 2640 2641 TCCCCTTTAG ATGCTGGAGT TGCAGCAATT GATATAGAAA CAAGAAAGAG GAAAGAGGAA 2700 2701 ATGAAAATGA AAGAGGCACA GGCTAGAGCA GTTGCTGAGC ATGGAGATTT AGCCCTAATC 2760 2761 GCAGTAGATG GTCTGCAATC TGCTACCCAA GAACGAATAC CATTAAGGCC CCCAATGCTA 2820 2821 CAGGTAGTCC GGTTAGCTTC TTTTCAGCAT GCTCCTTCGG TGCCACCTTT CTTAACATTG 2880 2881 CCAAAACAGA CTAAAGTTGA TGGAGATGAT TCAGCAATGC CAATAGAAGA GAAAAAAGTT 2940 2941 AATGAGATAG CTGTTGGTGG TGGAGGGGTC TCTGTGGCAG TTACTCGTTT TCCAACAGAG 3000 3001 CAGAAACGAC CAGTAGGACC TCTAGTTGTG GTGGGTGTGA GAGATGGAGT TCTTTGGCTT 3060 3061 ATCGATAGGT ACATGTGTGC ACATGCCTTA TCCCTAAGTC ATCCTGGTAT TCGTTGCCGC 3120 3121 TGTCTTGCTG CTTATGGGGA TGCTGTTAGT GCAGTGAAAT GGGCAAGTAG GCTCGGTAGG 3180 3181 GAACATCATG ATGATTTGGC ACAATTTATG ATGGGGATGG GCTATGCTAC TGAAGCACTG 3240 3241 CATTTACCTG GAATATCTAA GAGGTTGGAG TTTGATCTGG CCATGCAAAG CAATGATTTG 3300 3301 AAAAGAGCTC TTCAGTGCCT TCTTACCATG AGCAACAGCA GGGACATAGG TCAAGATGGT 3360 3361 ATTGGGCTGG ATTTGAATGA CATTCTCAAC ATAACAGCTA AAAAAGAAAA TATTGTTGAA 3420 3421 GCTGTTCAAG GAATAGTGAA ATTCGCAAGG GAATTTTTGG ACCTCATTGA TGCTGCGGAT 3480 3481 GCTACTGCTC AAGTTGATAT TGCTCGTGAA GCTCTCAAGA GGTTAGCCGC TGCAGGTTCT 3540 3541 GTGAAAGGAG CCTTACAGGG CCATGAATTG AGAAGACTTG CTTTATGCCT GGCAAATCAT 3600 3601 GGAGAGTTGA CAAGGCTGAA TGGTCTGGTT AGCAATTTGA TTTCAGCTGG CCTGGGACGG 3660 3661 GAAGCAGCAT TTTCTGCTGC AGTGTTGGGA GACAATGCTC TCATGGAAAA GTCATGGCAG 3720 3721 GATACTGGGA TGCTTGCTGA GGCTGTACTT CATGCCCATG CTCATGGACG ACCAACACTC 3780 3781 AAGAACTTGG TTCAGGCTTG GAACAAAATG CTGCAGAAAG AGGTTGACCA TGCTCCCTCT 3840 3841 CAAAAGATAG ATGCTGCATC TGCCTTTCTG GCTTCACTTG AAGAACCTAA GCTTACCAGT 3900 3901 TTAGCAGAAG CCGGGAAGAA GCCACCAATT GAAATTCTTC CACCGGGAAT GCCATCTCTT 3960 3961 TCTGCTCTAA TTACCACTCA GAAAAAACTA ACTCCTGGTA TACAGAGTTC ACAGCAGAAA 4020 4021 CCGTTACAAT TAGAAGGTCC TCCCACTGCC ACTCCTGAAG CAGTTATTGT ATCTGCTGCA 4080 4081 ACCACAGCAA CTTCAGAAGC TCCAGAAGAT GCATCTGCTG CAACCACAAC TACTTCAGCC 4140 4141 GCTACAGAAA ATGCACCTCC TAGCACTACA CCAGAAGCAG GAAGTTCTCC ACTGCCATCA 4200 4201 GAAGCAAGCA AACCTACTGT TGATGATAAG GCTCCTACTT CATCCCCAGG AAGTAATTCA 4260 4261 GATCAAATTG CTCCAGTGGA AAGTATACCG GAAACAATTG CAAGTGATTT GGCATTGCCA 4320 4321 CCACAAATAC CAGATAACCA GGGAGCAAGT GTTCCAGCTA GTACTACATT GCCAATGAGT 4380 4381 GATGTTCTAG GTTGA 4395 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Dac-0221 | Daucus carota | 93.89 | 4e-71 | 265 |
| LLPS-Thc-2235 | Theobroma cacao | 86.84 | 7e-120 | 414 |
| LLPS-Via-1011 | Vigna angularis | 86.57 | 4e-164 | 546 |
| LLPS-Vir-1576 | Vigna radiata | 86.45 | 4e-131 | 444 |
| LLPS-Met-2409 | Medicago truncatula | 86.19 | 0.0 | 833 |
| LLPS-Hea-2115 | Helianthus annuus | 85.34 | 1e-116 | 405 |
| LLPS-Lep-2340 | Leersia perrieri | 84.71 | 2e-38 | 161 |
| LLPS-Tru-2042 | Triticum urartu | 84.09 | 2e-39 | 164 |
| LLPS-Mua-0873 | Musa acuminata | 83.86 | 0.0 | 788 |
| LLPS-Sot-1846 | Solanum tuberosum | 83.19 | 4e-111 | 390 |
| LLPS-Art-1063 | Arabidopsis thaliana | 82.33 | 4e-114 | 398 |
| LLPS-Arl-1671 | Arabidopsis lyrata | 82.33 | 3e-114 | 398 |
| LLPS-Viv-1425 | Vitis vinifera | 81.81 | 0.0 | 1246 |
| LLPS-Nia-2231 | Nicotiana attenuata | 81.66 | 0.0 | 789 |
| LLPS-Brn-3293 | Brassica napus | 81.03 | 1e-112 | 394 |
| LLPS-Phv-0065 | Phaseolus vulgaris | 80.87 | 0.0 | 679 |
| LLPS-Glm-2479 | Glycine max | 80.67 | 0.0 | 674 |
| LLPS-Bro-2065 | Brassica oleracea | 80.6 | 4e-111 | 393 |
| LLPS-Brd-1033 | Brachypodium distachyon | 79.49 | 0.0 | 762 |
| LLPS-Prp-1624 | Prunus persica | 78.41 | 0.0 | 1207 |
| LLPS-Brr-1930 | Brassica rapa | 77.27 | 0.0 | 661 |
| LLPS-Zem-1412 | Zea mays | 75.38 | 0.0 | 615 |
| LLPS-Sob-2398 | Sorghum bicolor | 75.16 | 0.0 | 613 |
| LLPS-Sei-2316 | Setaria italica | 75.16 | 0.0 | 615 |
| LLPS-Tra-2817 | Triticum aestivum | 74.95 | 0.0 | 619 |
| LLPS-Hov-2155 | Hordeum vulgare | 74.62 | 0.0 | 614 |
| LLPS-Orbr-0847 | Oryza brachyantha | 73.95 | 0.0 | 616 |
| LLPS-Gor-2361 | Gossypium raimondii | 72.31 | 0.0 | 1718 |
| LLPS-Mae-2188 | Manihot esculenta | 72.2 | 0.0 | 1773 |
| LLPS-Cus-1584 | Cucumis sativus | 71.22 | 0.0 | 1672 |
| LLPS-Amt-0939 | Amborella trichopoda | 68.35 | 0.0 | 1635 |
| LLPS-Coc-1559 | Corchorus capsularis | 67.15 | 0.0 | 1654 |
| LLPS-Php-1178 | Physcomitrella patens | 65.25 | 9e-118 | 410 |
| LLPS-Sol-0839 | Solanum lycopersicum | 63.38 | 0.0 | 1306 |
| LLPS-Orp-0206 | Oryza punctata | 63.33 | 0.0 | 1442 |
| LLPS-Ors-1877 | Oryza sativa | 63.03 | 0.0 | 1428 |
| LLPS-Org-0922 | Oryza glaberrima | 63.03 | 0.0 | 1430 |
| LLPS-Ori-0252 | Oryza indica | 63.03 | 0.0 | 1428 |
| LLPS-Orm-1160 | Oryza meridionalis | 60.82 | 0.0 | 1346 |
| LLPS-Orr-0972 | Oryza rufipogon | 60.82 | 0.0 | 1345 |
| LLPS-Orb-2048 | Oryza barthii | 60.82 | 0.0 | 1349 |
| LLPS-Orni-1804 | Oryza nivara | 60.82 | 0.0 | 1349 |
| LLPS-Orgl-1790 | Oryza glumaepatula | 60.82 | 0.0 | 1349 |
| LLPS-Sem-2280 | Selaginella moellendorffii | 60.34 | 1e-138 | 464 |
| LLPS-Chr-1224 | Chlamydomonas reinhardtii | 27.24 | 4e-18 | 95.1 |