LLPS-Pot-2306
POPTR_005G236000
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Gene Name: | POPTR_005G236000 |
| Ensembl Gene: | POPTR_005G236000v3 |
| Ensembl Protein: | PNT38375 |
| Organism: | Populus trichocarpa |
| Taxa ID: | 3694 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Chromatin, Nucleolus, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | PNT38375 | PNT38375 |
| Ensembl | PNT38376 | PNT38376 |
| UniProt | B9H4J9, B9H4J9_POPTR | |
| GeneBank | CM009294 | PNT38375.1 |
| RefSeq | XM_002306873.2 | XP_002306909.2 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSAVEAEKKA AEETKVEEKG GELLFCGATC WNVVGRKKGA QEGNLVSPSR LRPLVGVDIR 60 61 VVASGSASCH CVALDVEGRC YTWGRNERGQ LGHGDTIQRD RPTVVSELSK YKLIRAGAGR 120 121 SHSVVVTEDG LSLAFGWNKH GQLGSGSARN EIESSPVRCL VSDVKTTACG ADFTVWLSSV 180 181 EGASILSAGL PQYGQLGHGT DKEYNTKDSS VRLAYEAQPR PRAIASLAGE TIVKVACGTN 240 241 HTVAVDSNGY VYTWGFGGYG RLGHREQKDE WVPRRVDIFT KHNVLPPGAV ISAGSVSSAC 300 301 TAGGGQLYMW GKIKNTGDDW MYPKPLMDLS GWNLRCMDSG NMHHFVGADN SCISWGYALN 360 361 GELGYGPNGQ KSSAVPKKVD ILEGMHVIGV ACGTGHSMVI VDRTNVGDGL DQLDVYDGKA 420 421 SDEGSGEPGS KDHVKQSGKK GAAKATDKSR KRKSKDASES EEENSNDESD ASDDQVNGQT 480 481 EKKSIRGGKV SGTGQSRGGK KSSSAGKSTG RGQDRPPSAN KSTNSSLEKT GKRGRPRKS 539 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTCGGCTG TTGAAGCGGA GAAGAAGGCT GCAGAGGAGA CGAAGGTAGA AGAGAAAGGA 60 61 GGGGAGCTGT TGTTCTGTGG CGCCACCTGT TGGAATGTTG TTGGTCGCAA GAAAGGTGCA 120 121 CAGGAAGGCA ACTTGGTCTC CCCTAGTCGG CTACGTCCTC TTGTTGGTGT CGATATCCGC 180 181 GTCGTTGCCT CAGGTTCCGC GTCGTGTCAC TGTGTGGCAT TGGATGTTGA GGGGCGTTGC 240 241 TACACATGGG GACGCAATGA GAGGGGGCAA CTAGGTCACG GAGACACGAT TCAGCGCGAT 300 301 AGACCAACAG TCGTTTCTGA ACTTTCCAAG TATAAACTTA TTAGAGCTGG AGCTGGTAGG 360 361 AGCCATTCAG TAGTGGTTAC TGAAGATGGT TTATCTCTTG CATTTGGCTG GAATAAACAT 420 421 GGGCAGCTGG GCTCTGGCTC AGCAAGAAAT GAAATTGAGT CATCTCCTGT TCGCTGTCTT 480 481 GTGTCTGATG TCAAAACTAC TGCTTGTGGC GCTGACTTCA CAGTGTGGCT ATCCTCTGTT 540 541 GAAGGAGCTT CTATATTATC TGCAGGCCTT CCACAGTATG GTCAACTTGG ACATGGAACG 600 601 GACAAAGAGT ACAATACAAA AGACAGCTCA GTCAGGCTGG CATATGAAGC CCAACCTCGC 660 661 CCTAGAGCGA TAGCTTCTCT TGCTGGGGAA ACCATTGTGA AAGTTGCATG TGGAACAAAT 720 721 CATACAGTGG CTGTGGATTC AAATGGTTAT GTTTACACGT GGGGCTTCGG AGGTTATGGA 780 781 AGGCTTGGAC ATAGAGAGCA GAAGGATGAG TGGGTCCCTC GGCGCGTGGA CATCTTCACA 840 841 AAGCACAATG TTTTGCCTCC TGGTGCAGTT ATTTCAGCTG GTTCTGTGAG TTCTGCTTGT 900 901 ACTGCAGGAG GTGGACAGTT GTATATGTGG GGCAAAATAA AAAATACTGG TGATGACTGG 960 961 ATGTATCCTA AACCTCTCAT GGATTTAAGT GGTTGGAATT TACGTTGCAT GGATTCAGGA 1020 1021 AACATGCATC ATTTTGTTGG TGCTGATAAC TCCTGCATAA GTTGGGGGTA TGCTCTGAAT 1080 1081 GGAGAACTGG GATATGGCCC TAATGGTCAA AAGTCTTCGG CAGTGCCCAA GAAGGTAGAT 1140 1141 ATTCTGGAGG GCATGCATGT TATTGGTGTT GCATGTGGCA CGGGCCATTC CATGGTCATA 1200 1201 GTTGACAGGA CGAATGTTGG TGATGGACTT GATCAGCTTG ATGTCTATGA TGGCAAAGCT 1260 1261 TCTGATGAAG GTAGTGGGGA GCCTGGGAGT AAAGACCATG TTAAGCAAAG TGGGAAAAAG 1320 1321 GGAGCTGCTA AAGCTACTGA TAAGTCCAGA AAGAGGAAGT CAAAGGATGC ATCAGAATCT 1380 1381 GAAGAAGAGA ATAGCAATGA TGAAAGTGAC GCCAGTGATG ATCAAGTCAA TGGCCAGACA 1440 1441 GAAAAGAAGA GCATACGTGG TGGAAAGGTT TCTGGTACGG GTCAAAGTAG AGGTGGAAAA 1500 1501 AAATCTTCAT CCGCTGGAAA GAGTACTGGA CGCGGGCAGG ACCGCCCTCC ATCGGCAAAT 1560 1561 AAAAGCACAA ATTCTTCTCT AGAAAAAACT GGTAAGAGAG GAAGGCCACG CAAGTCATAA 1620 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Mae-0590 | Manihot esculenta | 87.38 | 0.0 | 753 |
| LLPS-Glm-1330 | Glycine max | 87.34 | 0.0 | 731 |
| LLPS-Via-0568 | Vigna angularis | 86.1 | 0.0 | 726 |
| LLPS-Phv-0032 | Phaseolus vulgaris | 85.61 | 0.0 | 719 |
| LLPS-Gor-1481 | Gossypium raimondii | 85.24 | 0.0 | 732 |
| LLPS-Cus-0015 | Cucumis sativus | 85.04 | 0.0 | 717 |
| LLPS-Coc-0324 | Corchorus capsularis | 84.21 | 0.0 | 718 |
| LLPS-Sol-1562 | Solanum lycopersicum | 80.93 | 0.0 | 690 |
| LLPS-Arl-0387 | Arabidopsis lyrata | 80.0 | 0.0 | 681 |
| LLPS-Art-0314 | Arabidopsis thaliana | 79.75 | 0.0 | 676 |
| LLPS-Brn-2464 | Brassica napus | 78.88 | 0.0 | 670 |
| LLPS-Bro-1148 | Brassica oleracea | 78.64 | 0.0 | 668 |
| LLPS-Orbr-0084 | Oryza brachyantha | 77.86 | 0.0 | 650 |
| LLPS-Hea-1120 | Helianthus annuus | 77.8 | 0.0 | 689 |
| LLPS-Brr-0392 | Brassica rapa | 76.94 | 0.0 | 672 |
| LLPS-Ors-0335 | Oryza sativa | 76.62 | 0.0 | 645 |
| LLPS-Org-0696 | Oryza glaberrima | 76.62 | 0.0 | 645 |
| LLPS-Orr-0063 | Oryza rufipogon | 76.62 | 0.0 | 645 |
| LLPS-Orni-0435 | Oryza nivara | 76.62 | 0.0 | 645 |
| LLPS-Orb-0697 | Oryza barthii | 76.62 | 0.0 | 645 |
| LLPS-Ori-0147 | Oryza indica | 76.62 | 0.0 | 645 |
| LLPS-Orgl-0319 | Oryza glumaepatula | 76.62 | 0.0 | 646 |
| LLPS-Amt-0569 | Amborella trichopoda | 76.5 | 0.0 | 553 |
| LLPS-Thc-0038 | Theobroma cacao | 76.4 | 0.0 | 735 |
| LLPS-Sob-0508 | Sorghum bicolor | 76.37 | 0.0 | 648 |
| LLPS-Orp-0243 | Oryza punctata | 76.37 | 0.0 | 640 |
| LLPS-Prp-0040 | Prunus persica | 76.23 | 0.0 | 745 |
| LLPS-Vir-0685 | Vigna radiata | 76.22 | 0.0 | 641 |
| LLPS-Sei-0237 | Setaria italica | 76.12 | 0.0 | 644 |
| LLPS-Lep-0895 | Leersia perrieri | 75.38 | 0.0 | 621 |
| LLPS-Nia-0641 | Nicotiana attenuata | 75.1 | 0.0 | 728 |
| LLPS-Met-0023 | Medicago truncatula | 74.76 | 0.0 | 719 |
| LLPS-Viv-0912 | Vitis vinifera | 74.71 | 0.0 | 731 |
| LLPS-Brd-0494 | Brachypodium distachyon | 74.44 | 0.0 | 622 |
| LLPS-Tra-2074 | Triticum aestivum | 74.31 | 0.0 | 615 |
| LLPS-Hov-0121 | Hordeum vulgare | 74.25 | 0.0 | 619 |
| LLPS-Mua-0450 | Musa acuminata | 73.57 | 0.0 | 643 |
| LLPS-Sot-0068 | Solanum tuberosum | 71.81 | 0.0 | 702 |
| LLPS-Tru-0403 | Triticum urartu | 70.18 | 0.0 | 528 |
| LLPS-Zem-0979 | Zea mays | 68.92 | 0.0 | 620 |
| LLPS-Orm-0371 | Oryza meridionalis | 68.41 | 0.0 | 550 |
| LLPS-Dac-0134 | Daucus carota | 68.2 | 0.0 | 684 |
| LLPS-Php-0722 | Physcomitrella patens | 62.05 | 0.0 | 528 |
| LLPS-Sem-0731 | Selaginella moellendorffii | 59.44 | 5e-163 | 477 |
| LLPS-Osl-0599 | Ostreococcus lucimarinus | 48.0 | 4e-111 | 343 |
| LLPS-Chr-0158 | Chlamydomonas reinhardtii | 45.84 | 4e-110 | 343 |
| LLPS-Dio-2822 | Dipodomys ordii | 40.98 | 3e-07 | 57.8 |
| LLPS-Cas-4044 | Carlito syrichta | 40.0 | 2e-06 | 55.1 |
| LLPS-Gog-0593 | Gorilla gorilla | 39.2 | 3e-74 | 251 |
| LLPS-Orc-1098 | Oryctolagus cuniculus | 38.86 | 2e-79 | 262 |
| LLPS-Mod-2233 | Monodelphis domestica | 38.86 | 1e-81 | 268 |
| LLPS-Caf-1141 | Canis familiaris | 38.86 | 2e-80 | 264 |
| LLPS-Aim-0079 | Ailuropoda melanoleuca | 38.86 | 2e-80 | 264 |
| LLPS-Mup-0227 | Mustela putorius furo | 38.86 | 2e-80 | 264 |
| LLPS-Ora-0744 | Ornithorhynchus anatinus | 38.84 | 5e-61 | 211 |
| LLPS-Aon-0956 | Aotus nancymaae | 38.77 | 3e-79 | 264 |
| LLPS-Bot-0100 | Bos taurus | 38.77 | 8e-79 | 263 |
| LLPS-Abg-0720 | Absidia glauca | 38.69 | 4e-76 | 256 |
| LLPS-Otg-1955 | Otolemur garnettii | 38.61 | 2e-78 | 262 |
| LLPS-Pap-0582 | Pan paniscus | 38.61 | 1e-79 | 263 |
| LLPS-Ict-2228 | Ictidomys tridecemlineatus | 38.61 | 1e-79 | 262 |
| LLPS-Nol-0252 | Nomascus leucogenys | 38.61 | 1e-79 | 263 |
| LLPS-Eqc-0686 | Equus caballus | 38.61 | 4e-78 | 262 |
| LLPS-Cap-1756 | Cavia porcellus | 38.61 | 2e-79 | 262 |
| LLPS-Cea-0387 | Cercocebus atys | 38.61 | 1e-78 | 263 |
| LLPS-Mal-0044 | Mandrillus leucophaeus | 38.61 | 1e-79 | 263 |
| LLPS-Ova-0359 | Ovis aries | 38.61 | 4e-79 | 263 |
| LLPS-Sah-2152 | Sarcophilus harrisii | 38.57 | 1e-79 | 263 |
| LLPS-Lac-0696 | Latimeria chalumnae | 38.54 | 3e-83 | 274 |
| LLPS-Pat-1005 | Pan troglodytes | 38.52 | 1e-78 | 263 |
| LLPS-Hos-1480 | Homo sapiens | 38.52 | 1e-78 | 263 |
| LLPS-Mam-0485 | Macaca mulatta | 38.52 | 1e-78 | 263 |
| LLPS-Maf-0938 | Macaca fascicularis | 38.52 | 1e-78 | 263 |
| LLPS-Paa-1959 | Papio anubis | 38.52 | 1e-78 | 263 |
| LLPS-Myl-1711 | Myotis lucifugus | 38.37 | 9e-80 | 263 |
| LLPS-Tut-1309 | Tursiops truncatus | 38.37 | 2e-76 | 254 |
| LLPS-Caj-0429 | Callithrix jacchus | 38.3 | 3e-74 | 251 |
| LLPS-Loa-0160 | Loxodonta africana | 38.27 | 9e-77 | 258 |
| LLPS-Fec-0967 | Felis catus | 38.27 | 2e-78 | 262 |
| LLPS-Orl-2562 | Oryzias latipes | 38.24 | 1e-05 | 53.1 |
| LLPS-Asm-0500 | Astyanax mexicanus | 38.15 | 1e-75 | 254 |
| LLPS-Ran-0918 | Rattus norvegicus | 38.12 | 3e-79 | 261 |
| LLPS-Mum-0883 | Mus musculus | 38.02 | 2e-78 | 262 |
| LLPS-Orn-1116 | Oreochromis niloticus | 37.9 | 2e-10 | 68.2 |
| LLPS-Chs-3092 | Chlorocebus sabaeus | 37.88 | 5e-67 | 233 |
| LLPS-Gaga-0533 | Gallus gallus | 37.78 | 1e-77 | 260 |
| LLPS-Meg-0457 | Meleagris gallopavo | 37.62 | 7e-79 | 261 |
| LLPS-Rhb-0794 | Rhinopithecus bieti | 37.59 | 6e-79 | 263 |
| LLPS-Cis-0140 | Ciona savignyi | 37.41 | 2e-70 | 238 |
| LLPS-Gaa-0306 | Gasterosteus aculeatus | 37.41 | 3e-76 | 256 |
| LLPS-Chc-0160 | Chondrus crispus | 37.39 | 2e-67 | 234 |
| LLPS-Icp-1465 | Ictalurus punctatus | 37.38 | 1e-73 | 249 |
| LLPS-Leo-1688 | Lepisosteus oculatus | 37.19 | 5e-76 | 255 |
| LLPS-Pes-0217 | Pelodiscus sinensis | 37.12 | 4e-79 | 261 |
| LLPS-Xet-0215 | Xenopus tropicalis | 37.05 | 4e-67 | 230 |
| LLPS-Scm-0230 | Scophthalmus maximus | 36.9 | 1e-77 | 260 |
| LLPS-Xim-0639 | Xiphophorus maculatus | 36.9 | 9e-78 | 259 |
| LLPS-Urm-0479 | Ursus maritimus | 36.72 | 1e-70 | 241 |
| LLPS-Fud-0835 | Fukomys damarensis | 36.72 | 2e-68 | 234 |
| LLPS-Scf-1574 | Scleropages formosus | 36.7 | 3e-73 | 252 |
| LLPS-Pof-0445 | Poecilia formosa | 36.67 | 2e-77 | 259 |
| LLPS-Man-0404 | Macaca nemestrina | 36.57 | 2e-69 | 238 |
| LLPS-Dar-1290 | Danio rerio | 36.43 | 2e-73 | 249 |
| LLPS-Mea-1441 | Mesocricetus auratus | 36.39 | 6e-70 | 236 |
| LLPS-Fia-1753 | Ficedula albicollis | 36.26 | 2e-63 | 218 |
| LLPS-Tar-1084 | Takifugu rubripes | 36.17 | 7e-73 | 245 |
| LLPS-Drm-0162 | Drosophila melanogaster | 36.0 | 6e-68 | 233 |
| LLPS-Cii-1067 | Ciona intestinalis | 35.71 | 4e-71 | 241 |
| LLPS-Ten-0170 | Tetraodon nigroviridis | 35.61 | 1e-70 | 241 |
| LLPS-Sus-0614 | Sus scrofa | 34.29 | 6e-63 | 221 |
| LLPS-Tag-3324 | Taeniopygia guttata | 33.18 | 2e-19 | 96.3 |
| LLPS-Anc-2849 | Anolis carolinensis | 33.09 | 2e-26 | 119 |
| LLPS-Anp-1044 | Anas platyrhynchos | 33.08 | 8e-27 | 120 |
| LLPS-Gas-1265 | Galdieria sulphuraria | 31.74 | 1e-09 | 64.7 |
| LLPS-Usm-0530 | Ustilago maydis | 30.99 | 2e-39 | 155 |
| LLPS-Spr-0431 | Sporisorium reilianum | 30.47 | 1e-41 | 162 |
| LLPS-Cym-0088 | Cyanidioschyzon merolae | 29.45 | 2e-38 | 152 |
| LLPS-Crn-0849 | Cryptococcus neoformans | 28.67 | 2e-37 | 149 |
| LLPS-Miv-0721 | Microbotryum violaceum | 26.39 | 5e-39 | 154 |