LLPS-Pot-2058
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Ensembl Gene: | POPTR_002G083500v3 |
Ensembl Protein: | PNT48528 |
Organism: | Populus trichocarpa |
Taxa ID: | 3694 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAQTMVLMSG VSTRQVVDLK RDPLLQFQVQ RLRPAPFSRL LYNPLPSKAS SSNAFTTLAL 60 61 FKPRTKAVPK KAAPPPKPKV EDGIFGTSGG IGFTKQNELF VGRVAMIGFA ASLLGEAITG 120 121 KGILSQLNLE TGIPIYEAEP LLLFFILFTL LGAIGALGDR GRFVDDPTTG IEGAVIPPGK 180 181 SFRAALGLKE GGSPLFGFTK SNELFVGRLA QLGIAFSLIG EIITGKGALA QLNIETGIPV 240 241 NEIEPLVLFN VLFFFIAALN PGTGKFVTDE DEE 273 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCTCAAA CCATGGTGCT CATGTCTGGT GTCTCTACGA GGCAAGTGGT GGATTTGAAG 60 61 AGAGACCCTT TACTTCAGTT TCAAGTTCAG AGACTAAGGC CTGCACCATT CTCTCGTCTT 120 121 CTCTACAATC CTCTTCCTAG CAAAGCTTCT TCATCCAATG CTTTTACTAC GCTTGCTCTC 180 181 TTCAAACCCA GAACCAAGGC GGTTCCTAAG AAGGCTGCTC CACCACCGAA GCCAAAGGTT 240 241 GAAGATGGCA TTTTTGGTAC CTCTGGTGGC ATCGGTTTCA CTAAGCAGAA TGAGCTCTTC 300 301 GTGGGACGTG TTGCCATGAT TGGATTTGCT GCATCGTTGT TGGGAGAGGC AATAACAGGA 360 361 AAAGGAATTC TATCTCAGTT GAACCTAGAG ACTGGAATTC CCATTTACGA AGCAGAACCA 420 421 CTTCTTCTTT TCTTCATCCT TTTCACCTTG CTTGGAGCCA TTGGAGCTTT GGGTGATCGT 480 481 GGCCGCTTCG TTGATGACCC AACAACCGGC ATTGAAGGAG CTGTGATCCC TCCAGGAAAA 540 541 AGCTTCAGGG CAGCATTGGG TCTCAAGGAG GGAGGTCCTC TATTTGGATT TACAAAATCC 600 601 AACGAGCTTT TCGTGGGGAG ATTGGCTCAG CTGGGCATCG CTTTCTCTTT AATTGGAGAA 660 661 ATCATAACTG GAAAGGGAGC TCTAGCACAG CTCAACATCG AGACAGGGAT TCCAGTCAAT 720 721 GAAATTGAAC CACTTGTGTT GTTCAACGTT CTCTTCTTCT TCATTGCCGC ATTGAATCCT 780 781 GGGACTGGGA AATTCGTGAC CGATGAGGAT GAAGAGTAG 819 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Orbr-2177 | Oryza brachyantha | 88.83 | 7e-87 | 266 |
LLPS-Orp-1229 | Oryza punctata | 88.27 | 1e-85 | 263 |
LLPS-Orgl-1725 | Oryza glumaepatula | 87.67 | 1e-25 | 104 |
LLPS-Coc-2264 | Corchorus capsularis | 81.36 | 3e-121 | 355 |
LLPS-Thc-2385 | Theobroma cacao | 80.87 | 1e-109 | 325 |
LLPS-Gor-2482 | Gossypium raimondii | 80.73 | 1e-112 | 333 |
LLPS-Viv-2138 | Vitis vinifera | 80.36 | 4e-111 | 328 |
LLPS-Prp-1654 | Prunus persica | 78.93 | 1e-109 | 325 |
LLPS-Met-2152 | Medicago truncatula | 78.26 | 2e-115 | 340 |
LLPS-Sem-2443 | Selaginella moellendorffii | 78.21 | 4e-82 | 254 |
LLPS-Lep-0683 | Leersia perrieri | 77.37 | 2e-85 | 263 |
LLPS-Glm-0265 | Glycine max | 77.34 | 3e-101 | 304 |
LLPS-Hea-2096 | Helianthus annuus | 77.01 | 1e-97 | 294 |
LLPS-Cus-2158 | Cucumis sativus | 76.62 | 2e-108 | 322 |
LLPS-Dac-2172 | Daucus carota | 76.36 | 4e-108 | 321 |
LLPS-Amt-1380 | Amborella trichopoda | 75.54 | 3e-104 | 311 |
LLPS-Vir-0960 | Vigna radiata | 74.73 | 1e-94 | 286 |
LLPS-Phv-1980 | Phaseolus vulgaris | 74.73 | 5e-95 | 288 |
LLPS-Mua-1754 | Musa acuminata | 74.37 | 2e-93 | 284 |
LLPS-Via-0211 | Vigna angularis | 74.37 | 2e-95 | 288 |
LLPS-Nia-0243 | Nicotiana attenuata | 73.93 | 8e-99 | 297 |
LLPS-Arl-0393 | Arabidopsis lyrata | 73.63 | 3e-95 | 288 |
LLPS-Sol-2512 | Solanum lycopersicum | 73.24 | 5e-87 | 267 |
LLPS-Art-1568 | Arabidopsis thaliana | 72.89 | 3e-95 | 288 |
LLPS-Bro-1184 | Brassica oleracea | 72.89 | 2e-95 | 289 |
LLPS-Brd-1588 | Brachypodium distachyon | 72.66 | 6e-85 | 262 |
LLPS-Sot-1480 | Solanum tuberosum | 72.54 | 2e-86 | 266 |
LLPS-Brn-1036 | Brassica napus | 72.53 | 3e-94 | 286 |
LLPS-Brr-2064 | Brassica rapa | 72.53 | 3e-94 | 286 |
LLPS-Php-0331 | Physcomitrella patens | 72.32 | 6e-80 | 249 |
LLPS-Hov-1626 | Hordeum vulgare | 72.3 | 1e-94 | 287 |
LLPS-Tra-1304 | Triticum aestivum | 72.18 | 3e-94 | 286 |
LLPS-Tru-0897 | Triticum urartu | 71.99 | 2e-92 | 281 |
LLPS-Orni-0484 | Oryza nivara | 71.74 | 2e-98 | 296 |
LLPS-Ori-0353 | Oryza indica | 71.74 | 2e-98 | 296 |
LLPS-Orb-1747 | Oryza barthii | 71.74 | 6e-99 | 298 |
LLPS-Ors-1722 | Oryza sativa | 71.74 | 2e-98 | 296 |
LLPS-Org-1353 | Oryza glaberrima | 71.74 | 6e-99 | 298 |
LLPS-Orr-1940 | Oryza rufipogon | 71.74 | 2e-98 | 296 |
LLPS-Orm-0618 | Oryza meridionalis | 71.74 | 6e-99 | 298 |
LLPS-Sob-1685 | Sorghum bicolor | 71.53 | 4e-98 | 296 |
LLPS-Zem-1241 | Zea mays | 70.32 | 6e-96 | 290 |
LLPS-Sei-1874 | Setaria italica | 69.82 | 8e-91 | 277 |
LLPS-Chr-0910 | Chlamydomonas reinhardtii | 55.26 | 3e-15 | 76.6 |