• Disorder
  • Domain
  • PTM
  • Variation
  • Mutation
  • Interaction
  • Disease
  • Drug
  • Physicochemical
  • Function
  • Proteomics
  • Structure
  • Localization
  • Expression
  • Element
  • Methylation

LLPS-Pot-1456
POPTR_006G267500

Integrated Annotations

▼ OVERVIEW


Status: Unreviewed
Protein Name: Eukaryotic translation initiation factor 3 subunit B
Gene Name: POPTR_006G267500
Ensembl Gene: POPTR_006G267500v3
Ensembl Protein: PNT33963
Organism: Populus trichocarpa
Taxa ID: 3694
LLPS Type: LLPS regulator


▼ PROPERTY



——— Disorder propensity (calculated by IUPred2A)

▼ Classification


Condensates:
CondensateEvidenceOrthologs
P-body, Stress granulePredicted from orthologs(View)

▼ FUNCTION


Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

▼ CROSS REFERENCE


DatabaseNucleotide IDProtein ID
EnsemblPNT33963PNT33963
EnsemblPNT33962PNT33962
EnsemblPNT33964PNT33964
UniProtB9HB90, B9HB90_POPTR
GeneBankCM009295PNT33962.1
RefSeqXM_002308683.2XP_002308719.1

▼ SEQUENCE


Protein Sequence (FASTA)
1     MGEISLTELE  ERAAAAGIDL  SLIDIDSIKL  PPGDDFGVIS  DDEDVYQEEQ  MDFDYGLGNT  60
61    IVVDNLPVVP  KEKFDKLEGV  VNKIYSQIGV  IKEDGLWMPV  DPGTQKTLGY  CFIEYNTPQE  120
121   AELAKEKTNG  YKLDRAHIFA  VNMIEDFNRF  MKVPDEWAPP  EIRPYVPGEN  LQHWLTDEKA  180
181   RDQFVIRTGS  DTEVFWNDAR  HLKPDPVYKR  AYWTESFVQW  SPLGTYLATV  HRQGAAVWGG  240
241   DSTFNRLMRY  AHPQVKFIDF  SPGEKYLVTY  SSHEPSNPRD  ANRVVINIFD  VRTGKVMRDF  300
301   KGSADEFSIG  GAGGVAGVSW  PVFRWGGGKD  DKYFAKIGKN  MISVYETESF  SLVDKKSLKA  360
361   ENVMDFIWSP  TDPIFALFVP  ELGGGNQPAR  VSLIQIPGKE  ELRQKNLFSV  SDCKMYWQSN  420
421   GDYLAVKVDR  YTKTKKSTYT  GFELFRIKER  DIPIEVLELD  NKNDKIIAFA  WEPKGHRFAV  480
481   IHGDSPRPDV  SFYSMRTAHN  TGRVSKLTTL  KGKQANALFW  SPSGRYLILA  GLKGFNGQLE  540
541   FYNVDELETM  ATAEHFMATD  IEWDPTGRYV  ATSVTSVHHD  MENGFNIWSF  NGKLLYRTLK  600
601   DHFFQFLWRP  RPLSLLSPEK  EEEIAKNLKK  YSKKYEAEDQ  DVSLQLSEQD  REKRRMMKDE  660
661   WYKWVNEWKL  LHEEERLQRQ  VLRDGEASDE  EEEYEAKEVE  VEELLDVSEE  ILSFEYGQE  719
Nucleotide CDS Sequence (FASTA)
1     ATGGGAGAAA  TATCATTGAC  TGAACTAGAA  GAGAGAGCCG  CTGCGGCTGG  CATAGATCTC  60
61    TCGCTAATCG  ATATTGATTC  AATTAAACTT  CCTCCTGGAG  ATGATTTTGG  CGTTATTAGT  120
121   GATGATGAGG  ATGTCTATCA  AGAAGAACAG  ATGGATTTTG  ACTATGGGTT  AGGGAACACT  180
181   ATTGTAGTTG  ATAATCTTCC  GGTTGTTCCG  AAAGAAAAGT  TTGATAAGCT  TGAAGGAGTT  240
241   GTCAACAAGA  TTTATAGTCA  GATTGGTGTT  ATTAAGGAGG  ATGGCCTTTG  GATGCCTGTT  300
301   GATCCTGGGA  CTCAGAAAAC  TTTGGGTTAC  TGTTTCATCG  AGTACAATAC  CCCTCAGGAA  360
361   GCTGAGCTAG  CTAAGGAAAA  GACAAATGGG  TACAAGTTGG  ATAGAGCTCA  TATTTTTGCT  420
421   GTCAACATGA  TTGAAGATTT  CAATAGATTT  ATGAAAGTTC  CTGATGAGTG  GGCACCTCCA  480
481   GAGATCAGGC  CATATGTTCC  CGGGGAAAAT  CTTCAACATT  GGCTCACTGA  TGAAAAAGCT  540
541   CGAGATCAGT  TTGTGATTCG  CACTGGCTCA  GACACTGAGG  TTTTCTGGAA  TGATGCAAGA  600
601   CATTTGAAGC  CTGATCCTGT  TTACAAGCGT  GCTTATTGGA  CTGAGAGTTT  TGTGCAGTGG  660
661   TCTCCGCTTG  GGACTTACCT  GGCAACAGTT  CATAGGCAGG  GTGCTGCAGT  TTGGGGTGGC  720
721   GACAGTACCT  TTAATCGGCT  AATGCGTTAT  GCTCATCCTC  AGGTTAAATT  CATTGATTTT  780
781   TCCCCCGGTG  AGAAATATTT  GGTAACCTAC  AGCAGCCATG  AACCAAGTAA  TCCTCGTGAT  840
841   GCTAATAGGG  TTGTGATAAA  TATTTTTGAT  GTGAGAACTG  GTAAAGTAAT  GAGAGACTTT  900
901   AAGGGAAGTG  CTGATGAATT  TTCTATTGGA  GGAGCTGGTG  GTGTTGCAGG  AGTCTCTTGG  960
961   CCTGTTTTCA  GATGGGGTGG  CGGGAAAGAC  GACAAATATT  TTGCCAAAAT  TGGGAAGAAC  1020
1021  ATGATCTCTG  TGTATGAAAC  AGAGTCATTC  AGCCTTGTAG  ACAAAAAGTC  CTTGAAGGCT  1080
1081  GAAAATGTGA  TGGACTTCAT  TTGGTCACCA  ACAGATCCTA  TTTTTGCTCT  CTTTGTTCCT  1140
1141  GAACTTGGTG  GCGGGAATCA  ACCTGCCAGG  GTGAGCCTCA  TTCAAATTCC  CGGTAAAGAG  1200
1201  GAGTTGCGGC  AAAAGAACCT  TTTCAGTGTC  AGTGACTGTA  AGATGTACTG  GCAGAGTAAC  1260
1261  GGTGACTACC  TTGCTGTAAA  GGTTGATAGG  TATACAAAGA  CCAAGAAAAG  CACGTACACA  1320
1321  GGATTTGAGC  TTTTCCGTAT  AAAAGAGCGG  GACATACCAA  TTGAGGTGTT  GGAGCTAGAC  1380
1381  AATAAGAACG  ATAAGATAAT  TGCCTTCGCT  TGGGAGCCTA  AGGGCCATAG  GTTTGCTGTC  1440
1441  ATTCATGGTG  ACAGCCCTAG  GCCAGATGTA  AGCTTTTACT  CAATGAGGAC  TGCTCATAAC  1500
1501  ACTGGCCGGG  TTTCAAAGCT  AACTACTCTT  AAGGGCAAAC  AAGCAAATGC  TCTTTTCTGG  1560
1561  TCCCCATCTG  GTCGTTACCT  AATTCTTGCA  GGACTTAAAG  GTTTCAATGG  TCAGTTGGAA  1620
1621  TTCTACAATG  TTGATGAGCT  TGAGACAATG  GCAACAGCTG  AGCATTTTAT  GGCAACAGAT  1680
1681  ATTGAATGGG  ATCCCACTGG  AAGGTATGTT  GCAACTTCGG  TGACTTCAGT  TCATCATGAT  1740
1741  ATGGAAAATG  GCTTCAACAT  CTGGTCTTTC  AATGGAAAGC  TACTTTATCG  GACACTGAAG  1800
1801  GATCATTTCT  TCCAGTTCTT  GTGGCGCCCA  AGGCCACTAT  CTCTCTTGAG  TCCTGAAAAG  1860
1861  GAGGAAGAGA  TTGCTAAGAA  CTTGAAGAAG  TATAGCAAGA  AGTACGAGGC  AGAGGACCAG  1920
1921  GATGTTTCTT  TACAATTGAG  TGAACAGGAC  CGTGAGAAGA  GGAGGATGAT  GAAGGATGAA  1980
1981  TGGTACAAGT  GGGTCAATGA  GTGGAAGCTG  TTGCATGAAG  AGGAAAGATT  GCAGAGGCAG  2040
2041  GTTCTAAGGG  ATGGAGAAGC  TAGTGATGAA  GAGGAAGAGT  ACGAGGCAAA  AGAAGTTGAA  2100
2101  GTTGAAGAAT  TGCTAGATGT  TTCTGAGGAA  ATTCTTTCTT  TTGAATACGG  ACAGGAGTGA  2160

▼ KEYWORD


ID
Family
Complete proteome
Cytoplasm
Initiation factor
Protein biosynthesis
Reference proteome
RNA-binding

▼ GENE ONTOLOGY


ID
Classification
Description
Cellular Component
Eukaryotic 43S preinitiation complex
Cellular Component
Eukaryotic 48S preinitiation complex
Cellular Component
Eukaryotic translation initiation factor 3 complex
Molecular Function
Translation initiation factor activity
Molecular Function
Translation initiation factor binding
Biological Process
Formation of cytoplasmic translation initiation complex
Biological Process
Translational initiation

▼ KEGG



▼ ORTHOLOGY


DrLLPS IDOrganismIdentityE-valueScore
LLPS-Mae-0289Manihot esculenta89.920.01235
LLPS-Viv-0006Vitis vinifera87.990.01178
LLPS-Thc-0302Theobroma cacao87.980.01184
LLPS-Nia-0661Nicotiana attenuata87.64e-141 443
LLPS-Prp-0510Prunus persica86.380.01167
LLPS-Gor-0352Gossypium raimondii86.30.01158
LLPS-Via-1151Vigna angularis86.250.01170
LLPS-Glm-0683Glycine max86.250.01173
LLPS-Cus-0657Cucumis sativus86.150.01177
LLPS-Dac-0271Daucus carota86.110.01164
LLPS-Coc-0889Corchorus capsularis86.00.01165
LLPS-Phv-0037Phaseolus vulgaris85.240.01156
LLPS-Met-0208Medicago truncatula84.30.01135
LLPS-Hea-0300Helianthus annuus83.560.01123
LLPS-Sot-0194Solanum tuberosum83.540.01132
LLPS-Sol-0206Solanum lycopersicum83.230.01123
LLPS-Mua-0063Musa acuminata82.220.01066
LLPS-Vir-0744Vigna radiata81.040.01080
LLPS-Arl-0388Arabidopsis lyrata79.910.01087
LLPS-Art-1951Arabidopsis thaliana79.30.01082
LLPS-Amt-0226Amborella trichopoda79.120.01067
LLPS-Brn-0539Brassica napus78.540.01060
LLPS-Brr-0148Brassica rapa78.540.01059
LLPS-Bro-0403Brassica oleracea78.390.01058
LLPS-Lep-0077Leersia perrieri78.080.01022
LLPS-Sob-0609Sorghum bicolor77.780.01059
LLPS-Orgl-0433Oryza glumaepatula77.190.01050
LLPS-Orni-0519Oryza nivara77.190.01051
LLPS-Org-0430Oryza glaberrima77.190.01047
LLPS-Orm-0318Oryza meridionalis77.190.01050
LLPS-Orr-0553Oryza rufipogon77.190.01050
LLPS-Ors-0106Oryza sativa77.190.01047
LLPS-Orb-0098Oryza barthii77.050.01049
LLPS-Sei-1176Setaria italica76.980.01068
LLPS-Orp-0132Oryza punctata76.90.01044
LLPS-Brd-1250Brachypodium distachyon76.360.01056
LLPS-Tra-1846Triticum aestivum76.290.01039
LLPS-Orbr-0304Oryza brachyantha76.170.01026
LLPS-Hov-1623Hordeum vulgare75.580.01046
LLPS-Zem-0305Zea mays75.40.01055
LLPS-Tru-0598Triticum urartu75.290.01041
LLPS-Php-1184Physcomitrella patens73.320.0 974
LLPS-Ori-0584Oryza indica71.326e-47 168
LLPS-Sem-0753Selaginella moellendorffii69.250.0 924
LLPS-Osl-0122Ostreococcus lucimarinus52.540.0 694
LLPS-Chr-0256Chlamydomonas reinhardtii51.560.0 667
LLPS-Scf-0484Scleropages formosus44.315e-174 523
LLPS-Icp-1480Ictalurus punctatus43.411e-167 505
LLPS-Gog-0462Gorilla gorilla43.45e-122 386
LLPS-Xet-0357Xenopus tropicalis43.347e-166 501
LLPS-Ora-1016Ornithorhynchus anatinus43.32e-162 489
LLPS-Dar-0911Danio rerio43.254e-169 509
LLPS-Ten-0219Tetraodon nigroviridis43.128e-166 500
LLPS-Asm-0109Astyanax mexicanus43.13e-167 504
LLPS-Leo-0926Lepisosteus oculatus43.12e-171 515
LLPS-Mup-0350Mustela putorius furo43.065e-174 521
LLPS-Chs-0002Chlorocebus sabaeus43.051e-158 486
LLPS-Gaga-0076Gallus gallus42.944e-172 521
LLPS-Tar-0996Takifugu rubripes42.924e-166 501
LLPS-Poa-1845Pongo abelii42.868e-171 520
LLPS-Orc-0885Oryctolagus cuniculus42.865e-173 519
LLPS-Rhb-0069Rhinopithecus bieti42.863e-173 520
LLPS-Meg-0277Meleagris gallopavo42.869e-174 520
LLPS-Anp-0488Anas platyrhynchos42.869e-174 520
LLPS-Aim-1236Ailuropoda melanoleuca42.87e-60 209
LLPS-Pof-0129Poecilia formosa42.723e-166 501
LLPS-Orn-1702Oreochromis niloticus42.694e-166 501
LLPS-Xim-0308Xiphophorus maculatus42.645e-156 475
LLPS-Fia-1012Ficedula albicollis42.641e-173 522
LLPS-Mod-1083Monodelphis domestica42.641e-171 521
LLPS-Lac-0122Latimeria chalumnae42.641e-166 503
LLPS-Gaa-2101Gasterosteus aculeatus42.581e-163 495
LLPS-Urm-0531Ursus maritimus42.551e-170 518
LLPS-Scm-0933Scophthalmus maximus42.532e-164 497
LLPS-Cas-0304Carlito syrichta42.51e-166 504
LLPS-Paa-0551Papio anubis42.492e-172 521
LLPS-Caj-1050Callithrix jacchus42.494e-172 521
LLPS-Maf-0077Macaca fascicularis42.492e-172 521
LLPS-Aon-0968Aotus nancymaae42.494e-172 521
LLPS-Hos-0700Homo sapiens42.495e-172 521
LLPS-Orl-0631Oryzias latipes42.482e-167 505
LLPS-Tag-0373Taeniopygia guttata42.451e-172 518
LLPS-Ict-0791Ictidomys tridecemlineatus42.341e-173 522
LLPS-Cap-2405Cavia porcellus42.343e-172 521
LLPS-Sah-0367Sarcophilus harrisii42.333e-171 520
LLPS-Myl-2111Myotis lucifugus42.276e-172 516
LLPS-Bot-0610Bos taurus42.192e-171 519
LLPS-Sus-0022Sus scrofa42.194e-172 520
LLPS-Caf-0855Canis familiaris42.198e-172 520
LLPS-Eqc-3239Equus caballus42.197e-172 520
LLPS-Fec-0044Felis catus42.191e-171 520
LLPS-Pes-1309Pelodiscus sinensis42.181e-169 512
LLPS-Mal-0151Mandrillus leucophaeus42.136e-165 498
LLPS-Cea-1878Cercocebus atys42.134e-163 498
LLPS-Pat-0607Pan troglodytes42.134e-164 501
LLPS-Man-1183Macaca nemestrina42.134e-163 498
LLPS-Mam-0014Macaca mulatta42.116e-169 513
LLPS-Ran-0007Rattus norvegicus42.032e-170 516
LLPS-Mum-3824Mus musculus42.032e-170 516
LLPS-Loa-0741Loxodonta africana42.034e-171 518
LLPS-Anc-0024Anolis carolinensis41.934e-167 511
LLPS-Cis-0095Ciona savignyi41.635e-72 241
LLPS-Mea-0920Mesocricetus auratus41.586e-168 510
LLPS-Tum-0329Tuber melanosporum41.153e-153 469
LLPS-Dio-1439Dipodomys ordii40.521e-153 473
LLPS-Gas-0342Galdieria sulphuraria40.56e-154 469
LLPS-Chc-0042Chondrus crispus40.344e-146 451
LLPS-Pytr-0184Pyrenophora triticirepentis40.093e-149 459
LLPS-Pyt-0423Pyrenophora teres39.944e-148 459
LLPS-Lem-0564Leptosphaeria maculans39.833e-149 460
LLPS-Put-0291Puccinia triticina39.342e-144 447
LLPS-Otg-1120Otolemur garnettii39.222e-150 462
LLPS-Cii-0017Ciona intestinalis39.031e-142 441
LLPS-Drm-1053Drosophila melanogaster39.011e-138 431
LLPS-Scj-1012Schizosaccharomyces japonicus38.997e-135 422
LLPS-Spr-0620Sporisorium reilianum38.861e-142 442
LLPS-Usm-0525Ustilago maydis38.817e-142 441
LLPS-Phn-0483Phaeosphaeria nodorum38.691e-52 197
LLPS-Trv-0154Trichoderma virens38.285e-134 421
LLPS-Nol-1397Nomascus leucogenys38.245e-134 421
LLPS-Blg-0085Blumeria graminis38.22e-140 437
LLPS-Fuo-0168Fusarium oxysporum38.085e-93 306
LLPS-Trr-0564Trichoderma reesei38.043e-135 424
LLPS-Fus-0072Fusarium solani37.94e-137 428
LLPS-Asn-0177Aspergillus nidulans37.763e-142 441
LLPS-Scs-0052Sclerotinia sclerotiorum37.745e-139 433
LLPS-Scp-0026Schizosaccharomyces pombe37.728e-133 416
LLPS-Asf-0299Aspergillus flavus37.554e-140 436
LLPS-Aso-0050Aspergillus oryzae37.554e-140 436
LLPS-Asni-0512Aspergillus niger37.481e-141 440
LLPS-Ved-0057Verticillium dahliae37.488e-136 425
LLPS-Mel-0395Melampsora laricipopulina37.466e-134 420
LLPS-Mao-0945Magnaporthe oryzae37.462e-134 421
LLPS-Scc-0357Schizosaccharomyces cryophilus37.422e-132 416
LLPS-Nec-0135Neurospora crassa37.283e-135 424
LLPS-Gag-0385Gaeumannomyces graminis37.289e-135 422
LLPS-Dos-0160Dothistroma septosporum37.241e-133 419
LLPS-Cogr-0005Colletotrichum graminicola37.164e-131 412
LLPS-Beb-0130Beauveria bassiana37.134e-136 426
LLPS-Coo-0493Colletotrichum orbiculare37.111e-132 416
LLPS-Ast-0297Aspergillus terreus37.083e-140 436
LLPS-Asfu-0379Aspergillus fumigatus37.062e-141 439
LLPS-Map-0009Magnaporthe poae37.013e-133 418
LLPS-Fuv-0702Fusarium verticillioides36.974e-135 423
LLPS-Abg-0518Absidia glauca36.951e-148 459
LLPS-Zyt-0321Zymoseptoria tritici36.95e-135 422
LLPS-Yal-0645Yarrowia lipolytica36.882e-128 405
LLPS-Pug-0266Puccinia graminis36.871e-138 432
LLPS-Nef-0159Neosartorya fischeri36.773e-140 436
LLPS-Cog-0254Colletotrichum gloeosporioides36.722e-131 413
LLPS-Miv-0506Microbotryum violaceum36.543e-133 418
LLPS-Asc-1013Aspergillus clavatus36.437e-140 435
LLPS-Crn-0284Cryptococcus neoformans35.193e-114 369
LLPS-Cym-0498Cyanidioschyzon merolae34.762e-124 396
LLPS-Kop-0072Komagataella pastoris33.592e-103 339
LLPS-Asg-0500Ashbya gossypii33.576e-98 325
LLPS-Cae-0060Caenorhabditis elegans31.867e-86 292
LLPS-Sac-0108Saccharomyces cerevisiae30.874e-88 299
LLPS-Ere-0360Erinaceus europaeus22.661e-1997.4
LLPS-Ova-1414Ovis aries22.412e-1997.1
LLPS-Pap-3474Pan paniscus22.133e-1996.3