DrLLPS - Data resource of LLPS

LLPS-Pot-1035

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Ensembl Gene:	POPTR_019G050600v3
Ensembl Protein:	PNS90578
Organism:	Populus trichocarpa
Taxa ID:	3694
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nuclear speckle, Stress granule	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Drosophila melanogaster	LLPS-Drm-0222	Q9V3V0	Regulator	Stress granule	50.40	9e-20	89.4
Mus musculus	LLPS-Mum-2170	Q8BL97	Client	Nuclear speckle	47.71	2e-22	96.3

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	PNS90578	PNS90578
Ensembl	PNS90581	PNS90581
Ensembl	PNS90580	PNS90580
Ensembl	PNS90574	PNS90574
Ensembl	PNS90575	PNS90575
Ensembl	PNS90577	PNS90577
Ensembl	PNS90579	PNS90579
Ensembl	PNS90576	PNS90576
Ensembl	PNS90582	PNS90582

▼ SEQUENCE

Protein Sequence (FASTA)
1 MSRVYVGNLD PRVSERDLED EFRMYGVLRS VWVARRPPGY AFVEFDDRRD AIDAIRALDG 60 61 KNGWRVELSH NSKGGGGRSG DGHGRGGGED SKCYECGEPG HFARECRLRI GSRGLGSSRR 120 121 RSPSPRRRGS PSYGYGRRSY SPRERRSPRR RSLSPRRGRS YSRSPPYRHG RRDSPYAIGL 180 181 ICLFLPAATE AGSQTENQQA IEENNLLYFS SNRTI 215
Nucleotide CDS Sequence (FASTA)
1 ATGGATATGC AGCTACTAGT ATTATCAAAA GTTGCCAAGG CACTCTCTTG GGCCCCTAAG 60 61 CTGAGCAAGG GGCTACTTTG GTGCCTGAAA TGCCTGATGG CAAGTGTCTG GGTTGCTCGA 120 121 AGGCCACCAG GATATGCATT TGTTGAGTTT GATGATCGCA GGGATGCTAT AGATGCAATT 180 181 CGCGCATTGG ATGGAAAGAA TGGCTGGCGT GTGGAGCTTT CTCATAATTC TAAGGGTGGT 240 241 GGAGGCCGTA GTGGCGATGG ACATGGACGT GGTGGAGGTG AGGACTCAAA ATGTTATGAG 300 301 TGTGGTGAAC CTGGTCATTT TGCACGAGAG TGTCGCCTGC GCATTGGCTC ACGAGGCTTG 360 361 GGAAGTAGTC GTCGTCGAAG CCCCAGTCCT CGCCGCCGTG GAAGTCCAAG TTATGGGTAT 420 421 GGGCGCAGGA GTTATAGCCC CCGTGAGAGA AGATCTCCAA GACGCCGGAG CCTTTCACCT 480 481 CGCCGAGGTC GCAGCTATAG CAGGTCCCCT CCATATCGTC ATGGCCGCCG TGATTCACCT 540 541 TATGCTATTG GGTATGTTAT GCTTATGCAT ATTTGGGGAA AATAA 585

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Cus-0770	Cucumis sativus	90.41	1e-31	122
LLPS-Dac-0444	Daucus carota	89.72	7e-44	151
LLPS-Mae-0756	Manihot esculenta	88.79	9e-44	151
LLPS-Gor-2062	Gossypium raimondii	86.79	6e-44	152
LLPS-Thc-0400	Theobroma cacao	86.79	6e-42	146
LLPS-Vir-1052	Vigna radiata	85.0	9e-20	89.4
LLPS-Glm-2178	Glycine max	84.91	3e-44	152
LLPS-Viv-0962	Vitis vinifera	84.55	2e-41	145
LLPS-Coc-0879	Corchorus capsularis	83.96	4e-42	147
LLPS-Amt-0488	Amborella trichopoda	81.82	6e-12	64.7
LLPS-Sol-1330	Solanum lycopersicum	81.31	1e-37	137
LLPS-Brr-2638	Brassica rapa	81.13	5e-40	142
LLPS-Nia-0845	Nicotiana attenuata	81.13	1e-40	143
LLPS-Phv-0643	Phaseolus vulgaris	81.13	2e-38	137
LLPS-Arl-1052	Arabidopsis lyrata	81.13	7e-38	135
LLPS-Brn-2423	Brassica napus	81.13	3e-40	142
LLPS-Mua-0933	Musa acuminata	81.13	3e-38	137
LLPS-Sot-1400	Solanum tuberosum	80.37	2e-38	137
LLPS-Hea-2641	Helianthus annuus	79.46	4e-39	141
LLPS-Bro-0651	Brassica oleracea	78.5	5e-38	135
LLPS-Prp-1690	Prunus persica	76.64	7e-32	120
LLPS-Php-1370	Physcomitrella patens	74.53	5e-35	130
LLPS-Orr-0480	Oryza rufipogon	73.58	9e-35	132
LLPS-Org-2220	Oryza glaberrima	73.58	2e-35	130
LLPS-Ors-1472	Oryza sativa	73.58	1e-35	130
LLPS-Orp-0157	Oryza punctata	73.58	1e-34	130
LLPS-Orb-1672	Oryza barthii	73.58	4e-34	129
LLPS-Orni-1464	Oryza nivara	73.58	4e-34	129
LLPS-Art-1642	Arabidopsis thaliana	72.97	3e-35	129
LLPS-Orbr-2334	Oryza brachyantha	72.64	2e-35	132
LLPS-Sob-0186	Sorghum bicolor	71.7	2e-34	126
LLPS-Sei-2446	Setaria italica	71.7	2e-34	126
LLPS-Orm-1263	Oryza meridionalis	70.75	2e-36	131
LLPS-Orgl-2392	Oryza glumaepatula	70.75	1e-34	130
LLPS-Ori-0417	Oryza indica	70.75	4e-35	130
LLPS-Tru-1137	Triticum urartu	69.81	4e-34	126
LLPS-Zem-2422	Zea mays	69.81	3e-36	132
LLPS-Lep-2252	Leersia perrieri	69.81	3e-34	127
LLPS-Hov-0781	Hordeum vulgare	69.81	2e-32	124
LLPS-Tra-1061	Triticum aestivum	68.87	1e-33	127
LLPS-Brd-0210	Brachypodium distachyon	68.87	5e-34	127
LLPS-Sem-0356	Selaginella moellendorffii	68.18	3e-31	119
LLPS-Drm-0968	Drosophila melanogaster	65.52	1e-10	61.2
LLPS-Chr-0037	Chlamydomonas reinhardtii	64.79	2e-16	79.0
LLPS-Cii-1236	Ciona intestinalis	62.71	3e-10	60.1
LLPS-Ten-1241	Tetraodon nigroviridis	59.72	9e-12	64.7
LLPS-Asm-0431	Astyanax mexicanus	58.67	3e-11	63.5
LLPS-Cis-0031	Ciona savignyi	57.75	6e-10	59.7
LLPS-Cap-0992	Cavia porcellus	57.33	2e-10	61.2
LLPS-Eqc-2700	Equus caballus	57.33	2e-10	61.2
LLPS-Poa-0655	Pongo abelii	57.33	8e-11	61.2
LLPS-Caf-0996	Canis familiaris	57.33	2e-10	61.2
LLPS-Mam-0043	Macaca mulatta	57.33	2e-10	61.2
LLPS-Xet-0782	Xenopus tropicalis	57.33	2e-10	61.2
LLPS-Gaga-2125	Gallus gallus	57.33	2e-10	61.2
LLPS-Cas-0602	Carlito syrichta	57.33	2e-10	61.2
LLPS-Tag-1142	Taeniopygia guttata	57.33	2e-10	61.2
LLPS-Anc-2885	Anolis carolinensis	57.33	2e-10	60.8
LLPS-Nol-1363	Nomascus leucogenys	57.33	2e-10	61.2
LLPS-Ict-3112	Ictidomys tridecemlineatus	57.33	2e-10	61.2
LLPS-Mod-1887	Monodelphis domestica	57.33	2e-10	61.2
LLPS-Fec-0053	Felis catus	57.33	2e-10	61.2
LLPS-Scm-2711	Scophthalmus maximus	57.33	4e-11	62.8
LLPS-Lac-1992	Latimeria chalumnae	57.33	1e-10	61.6
LLPS-Hos-1496	Homo sapiens	57.33	2e-10	61.2
LLPS-Meg-1748	Meleagris gallopavo	57.33	2e-10	61.2
LLPS-Dar-2826	Danio rerio	57.33	2e-10	61.2
LLPS-Pof-0872	Poecilia formosa	57.33	6e-11	61.6
LLPS-Pat-0939	Pan troglodytes	57.33	2e-10	61.2
LLPS-Pap-3289	Pan paniscus	57.33	2e-10	61.2
LLPS-Urm-3884	Ursus maritimus	57.33	2e-10	61.2
LLPS-Anp-2016	Anas platyrhynchos	57.33	2e-10	61.2
LLPS-Loa-0282	Loxodonta africana	57.33	2e-10	61.2
LLPS-Man-1417	Macaca nemestrina	57.33	2e-10	61.2
LLPS-Pes-0226	Pelodiscus sinensis	57.33	2e-10	61.2
LLPS-Otg-0530	Otolemur garnettii	57.33	2e-10	61.2
LLPS-Orn-1129	Oreochromis niloticus	57.33	4e-10	61.2
LLPS-Rhb-1117	Rhinopithecus bieti	57.33	2e-10	61.2
LLPS-Orc-2381	Oryctolagus cuniculus	57.33	2e-10	61.2
LLPS-Fia-2917	Ficedula albicollis	57.33	2e-10	61.2
LLPS-Tar-0118	Takifugu rubripes	57.33	3e-10	60.5
LLPS-Tut-1488	Tursiops truncatus	57.33	2e-10	61.2
LLPS-Xim-0310	Xiphophorus maculatus	57.33	2e-10	61.2
LLPS-Scf-2117	Scleropages formosus	57.33	1e-10	61.2
LLPS-Bot-2668	Bos taurus	57.33	2e-10	61.2
LLPS-Dio-1371	Dipodomys ordii	57.33	2e-10	61.2
LLPS-Gaa-0131	Gasterosteus aculeatus	57.33	1e-10	61.2
LLPS-Ran-1681	Rattus norvegicus	57.33	2e-10	61.2
LLPS-Aim-1519	Ailuropoda melanoleuca	57.33	2e-10	60.8
LLPS-Mup-3630	Mustela putorius furo	57.33	2e-10	61.2
LLPS-Ova-3389	Ovis aries	57.33	2e-10	61.2
LLPS-Myl-2591	Myotis lucifugus	57.33	2e-10	61.2
LLPS-Paa-0829	Papio anubis	57.33	2e-10	61.2
LLPS-Mal-3291	Mandrillus leucophaeus	57.33	2e-10	61.2
LLPS-Ora-0520	Ornithorhynchus anatinus	57.33	2e-10	60.8
LLPS-Chs-1814	Chlorocebus sabaeus	57.33	2e-10	60.8
LLPS-Maf-1629	Macaca fascicularis	57.33	2e-10	61.2
LLPS-Mum-0859	Mus musculus	57.33	2e-10	61.2
LLPS-Mea-1489	Mesocricetus auratus	57.33	2e-10	61.2
LLPS-Sus-3978	Sus scrofa	57.33	2e-10	61.2
LLPS-Leo-0138	Lepisosteus oculatus	57.33	2e-10	61.2
LLPS-Aon-0646	Aotus nancymaae	57.33	2e-10	61.2
LLPS-Sah-0667	Sarcophilus harrisii	57.33	2e-10	61.2
LLPS-Cea-0268	Cercocebus atys	57.33	2e-10	61.2
LLPS-Orl-0754	Oryzias latipes	57.33	2e-10	62.0
LLPS-Gog-0771	Gorilla gorilla	57.33	2e-10	61.2
LLPS-Caj-0893	Callithrix jacchus	57.33	2e-10	61.2
LLPS-Icp-0868	Ictalurus punctatus	57.33	2e-10	60.8
LLPS-Fud-1271	Fukomys damarensis	57.33	2e-10	61.2
LLPS-Cae-1020	Caenorhabditis elegans	55.56	1e-08	56.2
LLPS-Gas-0074	Galdieria sulphuraria	41.67	7e-08	55.1

LLPS-Pot-1035

Protein Sequence

Nucleotide Sequence