LLPS-Pot-1027
POPTR_006G254400
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Gene Name: | POPTR_006G254400 |
| Ensembl Gene: | POPTR_006G254400v3 |
| Ensembl Protein: | PNT33726 |
| Organism: | Populus trichocarpa |
| Taxa ID: | 3694 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | PNT33726 | PNT33726 |
| Ensembl | PNT33728 | PNT33728 |
| Ensembl | PNT33727 | PNT33727 |
| UniProt | A0A2K2A877, A0A2K2A877_POPTR | |
| GeneBank | CM009295 | PNT33727.1, PNT33728.1, PNT33726.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MDSDNHLLPD GGLEAAHQNG GHQQSPAAGE DGVVSNNLNG SVGNTFKLDE GTTDNLSTGE 60 61 VEDELKAYVG SNGLPVFKEG EVKVKDADNS ENAKSQKGPG KRGTAKPSHL KNASATQVKK 120 121 GKDGRDAEVQ LTVSNGSVAV NSQLKQHLKS KSFNERQGQA SKQSGTSDAG PPEGIVEKMK 180 181 LKPLKKGPVD KAEADTDSTS SPTVEDAKPR KVGALPNYGF SFKCDERAEK RKEFYSKLEE 240 241 KIHAKEVEKT TLQAKSKETH EAEIKMLRKS LGFKATPMPS FYQEPAPPKV ELKKIPTTRA 300 301 KSPKLGRRKS SSPADTEGNN SQSYRPGRLS LDEKVSSNIP IKGLSPAHPK KPQRKSLPKL 360 361 PSEKTKLSSD EKTKLPKASN EENPTLSNQS NEGSSPTQEQ EAVSKNESEF LPGKDETAVK 420 421 EEAQATLAKD PVALVV 436 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGATTCTG ATAATCATCT TTTGCCTGAT GGTGGGCTTG AGGCTGCCCA TCAAAATGGT 60 61 GGTCATCAGC AAAGTCCTGC TGCTGGAGAG GATGGTGTTG TTTCAAATAA TTTAAATGGG 120 121 AGTGTGGGGA ACACTTTTAA GCTTGATGAA GGCACTACTG ATAATTTATC TACCGGGGAA 180 181 GTAGAGGATG AATTAAAGGC ATACGTGGGA AGCAATGGAC TGCCTGTTTT TAAGGAAGGA 240 241 GAAGTAAAAG TGAAAGATGC TGATAATTCA GAAAATGCTA AATCTCAGAA AGGTCCGGGA 300 301 AAGAGGGGTA CTGCAAAGCC CTCGCACCTG AAAAATGCCT CAGCCACTCA GGTGAAGAAA 360 361 GGTAAGGATG GAAGAGATGC TGAGGTGCAA CTCACTGTTT CAAATGGTTC TGTTGCTGTA 420 421 AATTCACAAT TAAAACAGCA TTTGAAAAGT AAATCATTCA ACGAGAGGCA GGGTCAGGCA 480 481 TCCAAGCAAT CTGGGACGTC TGATGCAGGA CCACCTGAAG GCATTGTGGA GAAGATGAAA 540 541 CTGAAACCTT TGAAAAAAGG GCCTGTTGAT AAAGCTGAAG CAGATACAGA CTCTACTTCA 600 601 AGTCCCACTG TGGAAGATGC CAAACCTCGC AAGGTGGGTG CACTTCCAAA TTATGGTTTC 660 661 AGCTTTAAGT GTGATGAACG AGCTGAGAAA AGGAAGGAGT TCTATTCAAA GCTCGAGGAA 720 721 AAGATTCATG CTAAGGAAGT GGAAAAGACT ACTCTGCAAG CTAAGTCCAA GGAAACTCAC 780 781 GAAGCTGAGA TTAAGATGCT TAGGAAGAGT TTGGGTTTTA AAGCAACACC TATGCCCAGC 840 841 TTTTATCAGG AGCCTGCACC ACCTAAGGTG GAGCTAAAGA AGATACCCAC AACAAGAGCC 900 901 AAATCTCCCA AGCTAGGTAG AAGGAAGAGC TCATCCCCTG CAGATACTGA AGGAAACAAT 960 961 AGCCAGAGCT ATCGACCAGG TCGGCTAAGT TTGGATGAGA AAGTATCTTC AAACATTCCC 1020 1021 ATCAAAGGAC TTTCCCCCGC CCATCCAAAG AAGCCACAGA GGAAGTCCCT TCCCAAACTG 1080 1081 CCTTCTGAAA AGACCAAGTT ATCCAGTGAC GAAAAAACTA AATTGCCTAA AGCATCAAAT 1140 1141 GAGGAAAATC CCACCTTATC TAATCAATCA AATGAAGGTT CATCTCCCAC CCAAGAGCAG 1200 1201 GAAGCTGTTT CAAAGAATGA GAGTGAATTT CTCCCCGGAA AAGATGAGAC AGCGGTTAAA 1260 1261 GAGGAAGCTC AGGCCACGTT GGCGAAAGAT CCAGTAGCAT TGGTGGTTTG A 1311 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Brn-1382 | Brassica napus | 85.42 | 7e-43 | 161 |
| LLPS-Bro-2296 | Brassica oleracea | 85.42 | 7e-43 | 161 |
| LLPS-Arl-0549 | Arabidopsis lyrata | 84.38 | 7e-42 | 159 |
| LLPS-Art-1251 | Arabidopsis thaliana | 84.38 | 5e-42 | 159 |
| LLPS-Brr-1796 | Brassica rapa | 83.0 | 2e-42 | 160 |
| LLPS-Thc-0094 | Theobroma cacao | 82.11 | 1e-40 | 156 |
| LLPS-Vir-0092 | Vigna radiata | 81.32 | 4e-38 | 147 |
| LLPS-Orbr-2026 | Oryza brachyantha | 81.32 | 2e-40 | 150 |
| LLPS-Gor-1486 | Gossypium raimondii | 80.0 | 1e-38 | 150 |
| LLPS-Coc-1933 | Corchorus capsularis | 75.24 | 9e-40 | 154 |
| LLPS-Orp-1233 | Oryza punctata | 74.52 | 6e-66 | 223 |
| LLPS-Orb-1998 | Oryza barthii | 73.12 | 2e-66 | 224 |
| LLPS-Orgl-2416 | Oryza glumaepatula | 73.12 | 3e-66 | 223 |
| LLPS-Orm-0742 | Oryza meridionalis | 73.12 | 2e-66 | 223 |
| LLPS-Lep-2074 | Leersia perrieri | 73.08 | 4e-64 | 218 |
| LLPS-Org-0060 | Oryza glaberrima | 73.08 | 6e-66 | 223 |
| LLPS-Nia-1418 | Nicotiana attenuata | 72.04 | 5e-34 | 136 |
| LLPS-Orni-1774 | Oryza nivara | 71.78 | 1e-64 | 219 |
| LLPS-Ors-0123 | Oryza sativa | 71.78 | 4e-64 | 218 |
| LLPS-Orr-0399 | Oryza rufipogon | 71.78 | 4e-64 | 218 |
| LLPS-Sol-0932 | Solanum lycopersicum | 71.28 | 2e-34 | 137 |
| LLPS-Ori-1208 | Oryza indica | 70.55 | 1e-63 | 216 |
| LLPS-Sot-0207 | Solanum tuberosum | 70.21 | 2e-33 | 134 |
| LLPS-Sei-0300 | Setaria italica | 69.33 | 6e-65 | 219 |
| LLPS-Dac-1635 | Daucus carota | 68.42 | 9e-39 | 149 |
| LLPS-Sob-2548 | Sorghum bicolor | 68.32 | 1e-61 | 210 |
| LLPS-Brd-0991 | Brachypodium distachyon | 67.48 | 1e-62 | 213 |
| LLPS-Via-2143 | Vigna angularis | 65.22 | 8e-36 | 142 |
| LLPS-Tra-2660 | Triticum aestivum | 62.6 | 2e-36 | 144 |
| LLPS-Tru-2073 | Triticum urartu | 62.28 | 2e-29 | 120 |
| LLPS-Viv-1789 | Vitis vinifera | 60.19 | 2e-29 | 122 |
| LLPS-Zem-0770 | Zea mays | 60.09 | 7e-67 | 225 |
| LLPS-Mae-1902 | Manihot esculenta | 59.59 | 6e-147 | 432 |
| LLPS-Cus-2115 | Cucumis sativus | 58.94 | 2e-37 | 147 |
| LLPS-Glm-2409 | Glycine max | 58.06 | 5e-39 | 151 |
| LLPS-Amt-0893 | Amborella trichopoda | 57.07 | 2e-50 | 184 |
| LLPS-Prp-0829 | Prunus persica | 56.85 | 7e-35 | 139 |
| LLPS-Mua-2544 | Musa acuminata | 54.31 | 2e-44 | 166 |
| LLPS-Hea-0607 | Helianthus annuus | 54.14 | 3e-40 | 153 |
| LLPS-Phv-1321 | Phaseolus vulgaris | 50.55 | 2e-37 | 146 |
| LLPS-Php-2347 | Physcomitrella patens | 48.9 | 9e-31 | 126 |
| LLPS-Met-0363 | Medicago truncatula | 48.29 | 1e-36 | 144 |