• Disorder
  • Domain
  • PTM
  • Variation
  • Mutation
  • Interaction
  • Disease
  • Drug
  • Physicochemical
  • Function
  • Proteomics
  • Structure
  • Localization
  • Expression
  • Element
  • Methylation

LLPS-Pot-0849
POPTR_016G059900

Integrated Annotations

▼ OVERVIEW


Status: Unreviewed
Protein Name: Gamma-tubulin complex component
Gene Name: POPTR_016G059900
Ensembl Gene: POPTR_016G059900v3
Ensembl Protein: PNS98104
Organism: Populus trichocarpa
Taxa ID: 3694
LLPS Type: Others


▼ PROPERTY



——— Disorder propensity (calculated by IUPred2A)

▼ Classification


Condensates:
CondensateEvidenceOrthologs
Centrosome/Spindle pole bodyPredicted from orthologs(View)

▼ FUNCTION


Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome.

▼ CROSS REFERENCE


DatabaseNucleotide IDProtein ID
EnsemblPNS98104PNS98104
EnsemblPNS98103PNS98103
UniProtA0A2K1XBE9, A0A2K1XBE9_POPTR
GeneBankCM009305PNS98104.1

▼ SEQUENCE


Protein Sequence (FASTA)
1     MEEDQQTILD  LVKELVNRLL  SQNPQNPKPP  ISNTTPNSPD  FQNSLRYAIR  ILSSRLTPSI  60
61    APDAVAISES  IKRGLATQGK  SSQALTFSEL  YNKFASKTGS  GSINNKWAVL  YLLKIISEDK  120
121   KIAQNAPNPS  PFLSNLGLNE  LDLSSESRVS  HNFKRGEKDY  DKGVLFVTKD  PENLREIAFR  180
181   EFVNLIKEEN  EVSEEVLVRD  VLYACQGIDG  KYVKFDANVD  GYVLLDSIKV  PRGTRVMVRK  240
241   LCELGWLFRK  VKGYISESMD  RFPAEDVGTV  GQAFCAALQN  ELLDYYKLLA  VLEAQAMNPI  300
301   PLVSETASSG  NYLSLRRLLV  WFAEPIVKMR  LMAVLVDKCR  VLRGGAMAGA  IHLHAQHGDP  360
361   LVNEFMRSLL  RCVCSPLFEM  VRSWVLEGQL  EDIFAEFFVV  GQPVKAEALW  REGYRLHAGM  420
421   LPSFISQPLA  QRILRTGKSI  NFLRVCCDDR  GWADATTEAA  AAAGTTTRRG  SLGYGETDAL  480
481   ETLVVEAAKR  IDKHLLDVMY  TRYKFKEHCL  AIKRYLLLGQ  GDFVQYLMDI  VGQELSEPAN  540
541   TISSFQLAGL  LESAIRSSNA  QYDDRDILDR  LRVKMMPHGT  GDRGWDVFSL  QYDARVPLDT  600
601   VFTESVMARY  LRIFNFLWKL  RRAEHALIGA  WKTMKPNCIT  SHSFTKLQHA  VKLQLLSTLR  660
661   RCQVLWNQMN  HFVTNLQYYI  MFEVLEVSWS  NFSNEMEVAR  DLDDLLAAHD  KYLHSIVEKS  720
721   LLGERSQSLY  KSLFVLFDLI  LRFRSHADRL  YEGIYELQTR  TRASSLSSQD  KNRSRRQTKD  780
781   KSSEPESWLN  DGRKALEERA  GEFLQNMGQE  LETISKEYTV  LLEGFLSQLP  MQQHVDLKFL  840
841   FFRLDFAEFY  SRLHPGS  857
Nucleotide CDS Sequence (FASTA)
1     ATGGAAGAAG  ACCAGCAGAC  AATCTTAGAT  CTAGTCAAAG  AACTAGTCAA  TCGCTTACTC  60
61    TCTCAAAACC  CACAAAACCC  TAAACCTCCA  ATTTCTAACA  CTACCCCTAA  CTCTCCTGAT  120
121   TTCCAAAATT  CTCTTCGCTA  CGCAATCCGC  ATTCTCTCCA  GCAGGCTAAC  CCCTTCAATT  180
181   GCGCCTGATG  CCGTCGCAAT  CTCTGAATCA  ATCAAGCGTG  GTCTCGCTAC  TCAAGGTAAA  240
241   TCCTCTCAAG  CTCTCACTTT  TTCTGAATTA  TACAACAAAT  TTGCATCCAA  AACGGGGTCG  300
301   GGAAGTATTA  ATAACAAATG  GGCAGTTCTT  TATTTGCTCA  AAATCATTTC  TGAAGATAAA  360
361   AAAATTGCAC  AGAATGCGCC  AAATCCATCG  CCTTTTTTAT  CTAACCTGGG  GTTAAATGAG  420
421   CTTGATTTGA  GTAGTGAATC  ACGGGTTTCG  CATAATTTTA  AGAGAGGGGA  AAAGGATTAT  480
481   GATAAGGGGG  TTTTGTTCGT  TACTAAAGAT  CCTGAGAATT  TGCGGGAAAT  CGCTTTTAGA  540
541   GAGTTTGTTA  ATTTGATTAA  AGAGGAAAAC  GAGGTGTCCG  AAGAGGTTTT  AGTGAGAGAT  600
601   GTGTTATATG  CTTGTCAAGG  GATTGATGGG  AAGTATGTGA  AGTTTGATGC  AAATGTTGAT  660
661   GGGTATGTTT  TGTTGGATTC  AATTAAGGTT  CCGAGAGGTA  CGAGGGTTAT  GGTTAGGAAG  720
721   TTGTGTGAGT  TGGGATGGTT  GTTTAGGAAA  GTTAAGGGGT  ATATTTCAGA  AAGTATGGAT  780
781   CGGTTTCCCG  CTGAAGATGT  GGGAACTGTA  GGGCAGGCAT  TTTGTGCTGC  CTTACAGAAT  840
841   GAGCTCTTGG  ATTATTATAA  GTTGTTGGCT  GTGCTTGAAG  CACAGGCGAT  GAATCCAATT  900
901   CCATTGGTTT  CAGAGACAGC  TAGTTCGGGT  AATTATTTGT  CATTGAGGAG  GTTGTTGGTT  960
961   TGGTTTGCTG  AGCCAATTGT  GAAAATGAGG  TTGATGGCTG  TTTTGGTTGA  TAAATGCAGA  1020
1021  GTTTTGAGGG  GTGGGGCGAT  GGCTGGGGCT  ATACATTTGC  ATGCCCAGCA  TGGAGATCCA  1080
1081  TTGGTGAATG  AGTTCATGAG  GAGCTTACTG  CGATGTGTAT  GTTCACCACT  TTTTGAAATG  1140
1141  GTTAGGAGTT  GGGTTTTGGA  AGGGCAGTTG  GAGGATATTT  TTGCTGAGTT  TTTTGTTGTG  1200
1201  GGTCAGCCAG  TGAAAGCTGA  GGCACTCTGG  AGGGAAGGTT  ACAGGCTTCA  TGCGGGGATG  1260
1261  CTTCCTTCAT  TCATTTCACA  ACCCCTTGCT  CAGCGCATTT  TAAGGACTGG  GAAGTCAATA  1320
1321  AATTTTCTTC  GTGTCTGTTG  TGATGATCGT  GGTTGGGCTG  ATGCCACAAC  GGAGGCTGCA  1380
1381  GCTGCTGCTG  GGACCACGAC  TAGAAGAGGG  AGTCTTGGAT  ATGGTGAAAC  TGATGCACTT  1440
1441  GAAACTCTGG  TTGTTGAAGC  AGCAAAGAGA  ATCGATAAGC  ATCTGTTGGA  TGTTATGTAC  1500
1501  ACGAGGTATA  AGTTCAAAGA  ACATTGCCTT  GCAATCAAGC  GCTATTTACT  TCTGGGACAA  1560
1561  GGTGATTTTG  TTCAGTATTT  AATGGATATT  GTTGGGCAGG  AACTTTCTGA  GCCTGCTAAT  1620
1621  ACAATTAGTT  CATTCCAGTT  GGCAGGGTTG  CTGGAAAGTG  CAATTCGTTC  ATCTAATGCT  1680
1681  CAATATGATG  ATCGTGACAT  ATTAGATAGG  TTGAGGGTGA  AGATGATGCC  ACATGGAACT  1740
1741  GGAGATAGGG  GCTGGGATGT  ATTCTCATTG  CAATATGATG  CCAGAGTACC  ATTAGACACA  1800
1801  GTGTTCACAG  AATCTGTTAT  GGCAAGATAT  TTAAGAATTT  TTAATTTCCT  GTGGAAGCTG  1860
1861  AGGCGAGCAG  AGCATGCTCT  TATTGGTGCG  TGGAAGACAA  TGAAACCTAA  TTGTATTACT  1920
1921  TCTCATTCTT  TCACCAAGCT  GCAGCATGCA  GTCAAGTTGC  AGTTACTTTC  AACACTGAGA  1980
1981  CGATGCCAGG  TCCTTTGGAA  TCAGATGAAT  CATTTTGTAA  CAAACTTGCA  ATATTATATC  2040
2041  ATGTTTGAAG  TTCTGGAGGT  TTCATGGTCT  AACTTCTCAA  ATGAGATGGA  AGTAGCGAGG  2100
2101  GATCTTGATG  ATCTACTTGC  AGCACATGAT  AAGTACCTCC  ATTCGATAGT  AGAGAAATCT  2160
2161  CTTCTTGGTG  AACGATCCCA  ATCCCTTTAC  AAGTCACTCT  TTGTCTTGTT  TGACCTTATA  2220
2221  TTACGTTTCA  GAAGTCATGC  TGATCGGTTG  TATGAAGGAA  TTTATGAGTT  ACAAACAAGA  2280
2281  ACTAGGGCAT  CCTCTTTATC  CTCTCAAGAC  AAGAACAGAT  CACGGAGGCA  GACAAAAGAC  2340
2341  AAATCTTCAG  AGCCTGAATC  ATGGCTTAAT  GATGGCAGGA  AAGCTCTAGA  AGAACGTGCT  2400
2401  GGTGAATTTC  TTCAAAATAT  GGGGCAGGAA  CTGGAAACAA  TATCAAAGGA  ATATACTGTG  2460
2461  TTGCTCGAAG  GTTTCTTGTC  TCAGTTGCCT  ATGCAGCAAC  ATGTTGATTT  GAAATTCCTC  2520
2521  TTCTTTCGGC  TTGACTTTGC  AGAATTTTAT  AGTCGGTTGC  ATCCTGGATC  ATAG  2574

▼ KEYWORD


ID
Family
Coiled coil
Complete proteome
Cytoplasm
Cytoskeleton
Microtubule
Reference proteome

▼ GENE ONTOLOGY


ID
Classification
Description
Cellular Component
Cytoplasm
Cellular Component
Microtubule
Cellular Component
Microtubule organizing center
Cellular Component
Spindle pole
Molecular Function
Gamma-tubulin binding
Biological Process
Microtubule nucleation

▼ ORTHOLOGY


DrLLPS IDOrganismIdentityE-valueScore
LLPS-Mae-0166Manihot esculenta86.10.01449
LLPS-Coc-0172Corchorus capsularis83.510.01429
LLPS-Thc-0192Theobroma cacao82.810.01410
LLPS-Gor-0784Gossypium raimondii82.530.01380
LLPS-Viv-0628Vitis vinifera81.370.01381
LLPS-Prp-0042Prunus persica81.310.01385
LLPS-Brr-0192Brassica rapa79.480.0 974
LLPS-Cus-0371Cucumis sativus78.620.01314
LLPS-Art-0556Arabidopsis thaliana76.080.01301
LLPS-Arl-0165Arabidopsis lyrata75.970.01303
LLPS-Glm-1329Glycine max75.380.01255
LLPS-Phv-1164Phaseolus vulgaris74.560.01280
LLPS-Via-0185Vigna angularis74.360.01280
LLPS-Vir-0133Vigna radiata74.130.01274
LLPS-Mua-0125Musa acuminata73.440.0 781
LLPS-Dac-0243Daucus carota73.360.01263
LLPS-Bro-1520Brassica oleracea72.870.01212
LLPS-Brn-0042Brassica napus72.80.01205
LLPS-Met-0069Medicago truncatula72.370.01241
LLPS-Tru-0468Triticum urartu72.090.0 876
LLPS-Orb-0283Oryza barthii72.00.0 746
LLPS-Nia-0635Nicotiana attenuata71.790.01231
LLPS-Amt-0206Amborella trichopoda70.40.0 668
LLPS-Orm-0642Oryza meridionalis70.350.0 965
LLPS-Hov-0755Hordeum vulgare69.780.0 976
LLPS-Hea-0378Helianthus annuus69.620.01187
LLPS-Orbr-0024Oryza brachyantha69.50.0 973
LLPS-Sot-0544Solanum tuberosum68.990.01240
LLPS-Sol-0835Solanum lycopersicum68.880.01237
LLPS-Orp-0826Oryza punctata68.880.0 947
LLPS-Ori-0476Oryza indica63.660.0 817
LLPS-Sob-0907Sorghum bicolor63.180.01038
LLPS-Sei-0240Setaria italica62.920.01028
LLPS-Lep-1132Leersia perrieri62.920.01016
LLPS-Ors-0029Oryza sativa62.50.01019
LLPS-Zem-0644Zea mays62.50.01022
LLPS-Orr-0049Oryza rufipogon62.460.01019
LLPS-Orni-1319Oryza nivara62.380.01016
LLPS-Brd-0066Brachypodium distachyon62.340.01012
LLPS-Orgl-0886Oryza glumaepatula62.340.01020
LLPS-Tra-1823Triticum aestivum62.180.01018
LLPS-Sem-0421Selaginella moellendorffii58.60.0 981
LLPS-Php-0549Physcomitrella patens56.010.0 959
LLPS-Osl-0166Ostreococcus lucimarinus42.211e-171 522
LLPS-Gog-0216Gorilla gorilla39.774e-0964.3
LLPS-Orc-0271Oryctolagus cuniculus39.152e-114 376
LLPS-Gaa-1705Gasterosteus aculeatus39.042e-131 422
LLPS-Maf-0082Macaca fascicularis38.857e-116 379
LLPS-Rhb-0649Rhinopithecus bieti38.851e-115 377
LLPS-Anp-0242Anas platyrhynchos38.392e-95 321
LLPS-Pof-0974Poecilia formosa37.898e-133 426
LLPS-Dar-0781Danio rerio37.872e-135 433
LLPS-Scm-0880Scophthalmus maximus37.797e-132 423
LLPS-Orl-0018Oryzias latipes37.761e-130 420
LLPS-Xet-0364Xenopus tropicalis37.722e-133 428
LLPS-Leo-0365Lepisosteus oculatus37.658e-131 421
LLPS-Cis-0272Ciona savignyi37.648e-122 389
LLPS-Orn-0437Oreochromis niloticus37.612e-132 426
LLPS-Asm-1057Astyanax mexicanus37.592e-134 431
LLPS-Pes-0028Pelodiscus sinensis37.489e-131 421
LLPS-Lac-0223Latimeria chalumnae37.442e-130 420
LLPS-Tar-1550Takifugu rubripes37.388e-131 421
LLPS-Anc-0404Anolis carolinensis37.213e-0655.5
LLPS-Caj-0869Callithrix jacchus37.05e-128 413
LLPS-Aon-1031Aotus nancymaae37.02e-128 415
LLPS-Chs-0137Chlorocebus sabaeus37.03e-128 414
LLPS-Paa-0314Papio anubis37.04e-128 414
LLPS-Fia-2116Ficedula albicollis36.892e-132 421
LLPS-Mum-0612Mus musculus36.865e-127 410
LLPS-Pap-0587Pan paniscus36.863e-128 414
LLPS-Pat-0440Pan troglodytes36.863e-128 414
LLPS-Ten-1851Tetraodon nigroviridis36.864e-119 390
LLPS-Fec-0994Felis catus36.764e-128 414
LLPS-Tag-1197Taeniopygia guttata36.767e-131 421
LLPS-Hos-0265Homo sapiens36.711e-127 412
LLPS-Mup-1229Mustela putorius furo36.612e-128 414
LLPS-Ora-0899Ornithorhynchus anatinus36.594e-130 419
LLPS-Ova-2140Ovis aries36.523e-125 405
LLPS-Ran-0252Rattus norvegicus36.512e-127 412
LLPS-Eqc-1492Equus caballus36.479e-128 413
LLPS-Fud-0010Fukomys damarensis36.48e-127 410
LLPS-Urm-0061Ursus maritimus36.42e-122 402
LLPS-Caf-0914Canis familiaris36.362e-128 414
LLPS-Cii-0768Ciona intestinalis36.349e-123 399
LLPS-Cap-0209Cavia porcellus36.312e-126 409
LLPS-Aim-0732Ailuropoda melanoleuca36.31e-128 415
LLPS-Icp-1042Ictalurus punctatus36.271e-121 397
LLPS-Loa-0831Loxodonta africana36.266e-127 410
LLPS-Sus-0126Sus scrofa36.237e-127 410
LLPS-Myl-0511Myotis lucifugus36.182e-127 412
LLPS-Mod-1704Monodelphis domestica36.141e-127 412
LLPS-Bot-0642Bos taurus36.014e-126 408
LLPS-Otg-1163Otolemur garnettii36.012e-125 407
LLPS-Sah-0023Sarcophilus harrisii35.992e-126 409
LLPS-Meg-0663Meleagris gallopavo35.957e-125 405
LLPS-Ict-2234Ictidomys tridecemlineatus35.793e-123 400
LLPS-Dio-1056Dipodomys ordii35.666e-125 405
LLPS-Poa-0527Pongo abelii35.527e-110 357
LLPS-Mea-1413Mesocricetus auratus35.275e-28 125
LLPS-Mam-1057Macaca mulatta35.246e-119 389
LLPS-Man-0393Macaca nemestrina35.11e-106 355
LLPS-Nol-0190Nomascus leucogenys34.936e-117 384
LLPS-Abg-0209Absidia glauca34.794e-133 426
LLPS-Cea-1417Cercocebus atys33.933e-100 338
LLPS-Gaga-0526Gallus gallus33.786e-104 348
LLPS-Gag-0462Gaeumannomyces graminis33.452e-82 291
LLPS-Fuo-0169Fusarium oxysporum33.213e-79 273
LLPS-Fuv-0727Fusarium verticillioides33.037e-78 269
LLPS-Mal-0139Mandrillus leucophaeus32.793e-103 344
LLPS-Chr-0503Chlamydomonas reinhardtii32.692e-86 302
LLPS-Gas-0295Galdieria sulphuraria32.417e-112 367
LLPS-Cog-0471Colletotrichum gloeosporioides32.362e-95 326
LLPS-Dos-0519Dothistroma septosporum32.062e-97 331
LLPS-Usm-0595Ustilago maydis32.031e-84 298
LLPS-Spr-0537Sporisorium reilianum31.81e-86 303
LLPS-Scc-0426Schizosaccharomyces cryophilus31.463e-90 310
LLPS-Ved-0618Verticillium dahliae31.392e-92 317
LLPS-Asc-0123Aspergillus clavatus31.36e-88 307
LLPS-Zyt-0065Zymoseptoria tritici31.193e-88 306
LLPS-Pyt-0400Pyrenophora teres31.141e-91 315
LLPS-Asf-0900Aspergillus flavus31.041e-89 312
LLPS-Aso-0066Aspergillus oryzae31.041e-89 312
LLPS-Coo-0099Colletotrichum orbiculare30.664e-98 333
LLPS-Pug-0208Puccinia graminis30.564e-97 330
LLPS-Drm-0018Drosophila melanogaster30.534e-86 300
LLPS-Cogr-0478Colletotrichum graminicola30.481e-100 340
LLPS-Scj-0146Schizosaccharomyces japonicus30.424e-78 275
LLPS-Put-0033Puccinia triticina30.42e-44 176
LLPS-Asni-0469Aspergillus niger30.242e-81 289
LLPS-Mao-0279Magnaporthe oryzae30.164e-93 320
LLPS-Mel-0513Melampsora laricipopulina30.033e-75 263
LLPS-Asfu-0119Aspergillus fumigatus29.938e-93 321
LLPS-Ast-0151Aspergillus terreus29.615e-92 318
LLPS-Trv-0038Trichoderma virens29.495e-93 318
LLPS-Fus-0953Fusarium solani29.461e-100 339
LLPS-Nec-0147Neurospora crassa29.263e-96 329
LLPS-Trr-0381Trichoderma reesei29.268e-93 318
LLPS-Scs-0521Sclerotinia sclerotiorum29.221e-99 338
LLPS-Phn-0006Phaeosphaeria nodorum28.918e-100 338
LLPS-Beb-0323Beauveria bassiana28.94e-94 321
LLPS-Scp-0038Schizosaccharomyces pombe28.789e-90 308
LLPS-Miv-0881Microbotryum violaceum28.763e-81 287
LLPS-Asn-0169Aspergillus nidulans28.72e-84 296
LLPS-Blg-0278Blumeria graminis28.672e-98 334
LLPS-Pytr-0096Pyrenophora triticirepentis28.61e-93 321
LLPS-Nef-0260Neosartorya fischeri28.243e-80 285
LLPS-Tum-0224Tuber melanosporum27.867e-97 330
LLPS-Crn-0034Cryptococcus neoformans27.753e-78 278
LLPS-Yal-0390Yarrowia lipolytica27.34e-63 232
LLPS-Lem-0548Leptosphaeria maculans26.653e-92 317
LLPS-Org-0876Oryza glaberrima26.587e-30 130
LLPS-Scf-1839Scleropages formosus24.311e-27 124
LLPS-Xim-1851Xiphophorus maculatus23.543e-28 126
LLPS-Asg-0466Ashbya gossypii23.221e-32 140
LLPS-Sac-0496Saccharomyces cerevisiae21.388e-32 137