LLPS-Pot-0284
POPTR_001G407100
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Chlorophyll a-b binding protein, chloroplastic |
| Gene Name: | POPTR_001G407100 |
| Ensembl Gene: | POPTR_001G407100v3 |
| Ensembl Protein: | PNT59393 |
| Organism: | Populus trichocarpa |
| Taxa ID: | 3694 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
| The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | PNT59393 | PNT59393 |
| Ensembl | PNT59394 | PNT59394 |
| UniProt | B9N576, B9N576_POPTR | |
| GeneBank | CM009290 | PNT59394.1 |
| RefSeq | XM_006370276.1 | XP_006370338.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MASLASSSTI VRPTPFLGKR GSNANPLRDV VSMGNGKYIM SNELWYGPDR VKYLGPFSAQ 60 61 TPSYLTGEFP GDYGWDTAGL SADPEAFAKN RALEVIHGRW AMLGALGCIT PEVLEKWVKV 120 121 DFKEPVWFKA GAQIFSEGGL DYLGNPNLVH AQSILAVLGF QVVLMGLVEG FRINGLPGVG 180 181 EGNDLYPGGQ YFDPLGLADD PATFAELKVK EIKNGRLAMF SMFGFFVQAI VTGKGPLENL 240 241 LDHLDNPVAN NAWVYATKFV PGS 263 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCTAACCC TCTTAGAGAT GTTGTCTCCA TGGGAAATGG CAAATACATC ATGCAATGAG 60 61 TTGTGGTATG GACCTGACAG GGTGAAGTAC TTGGGACCAT TTTCAGCTCA GACTCCTTCA 120 121 TACCTGACTG GAGAATTCCC AGGTGACTAT GGATGGGACA CTGCTGGTTT ATCAGCTGAT 180 181 CCTGAGGCCT TTGCTAAAAA CAGGGCTCTT GAGGTGATCC ATGGCAGATG GGCTATGCTT 240 241 GGAGCACTAG GCTGCATCAC CCCAGAGGTC CTTGAGAAAT GGGTTAAAGT AGACTTCAAG 300 301 GAACCAGTGT GGTTCAAAGC TGGAGCTCAA ATCTTCTCAG AAGGTGGCTT GGACTACTTG 360 361 GGCAACCCCA ACCTTGTCCA TGCCCAAAGC ATCCTTGCTG TCCTTGGATT CCAAGTTGTC 420 421 CTCATGGGCC TTGTTGAGGG ATTCCGCATC AATGGTCTCC CCGGAGTAGG AGAGGGTAAT 480 481 GACCTTTACC CTGGTGGCCA ATACTTCGAC CCTCTCGGCC TGGCCGATGA TCCAGCTACA 540 541 TTCGCCGAGC TCAAGGTGAA GGAAATCAAG AATGGACGGC TAGCCATGTT CTCCATGTTT 600 601 GGATTCTTTG TTCAGGCTAT TGTTACTGGA AAAGGTCCCC TGGAGAATCT CTTGGACCAC 660 661 CTGGACAACC CTGTTGCTAA CAACGCTTGG GTCTACGCCA CCAAGTTTGT GCCTGGGTCA 720 721 TAA 723 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Chloroplast envelope | |
Cellular Component | Chloroplast thylakoid membrane | |
Cellular Component | Integral component of membrane | |
Cellular Component | Photosystem I | |
Cellular Component | Photosystem II | |
Cellular Component | Plastoglobule | |
Molecular Function | Chlorophyll binding | |
Biological Process | Photosynthesis, light harvesting in photosystem I | |
Biological Process | Protein-chromophore linkage | |
Biological Process | Response to light stimulus |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Mae-2604 | Manihot esculenta | 95.82 | 0.0 | 518 |
| LLPS-Phv-0701 | Phaseolus vulgaris | 93.56 | 0.0 | 507 |
| LLPS-Coc-2316 | Corchorus capsularis | 93.56 | 6e-179 | 500 |
| LLPS-Cus-1507 | Cucumis sativus | 93.2 | 3e-169 | 476 |
| LLPS-Hea-0263 | Helianthus annuus | 92.83 | 3e-177 | 496 |
| LLPS-Viv-1249 | Vitis vinifera | 92.8 | 0.0 | 505 |
| LLPS-Met-0869 | Medicago truncatula | 92.52 | 6e-174 | 488 |
| LLPS-Thc-2306 | Theobroma cacao | 92.42 | 3e-179 | 501 |
| LLPS-Prp-0524 | Prunus persica | 92.42 | 9e-178 | 498 |
| LLPS-Nia-2282 | Nicotiana attenuata | 92.4 | 3e-178 | 499 |
| LLPS-Gor-2728 | Gossypium raimondii | 92.4 | 4e-178 | 498 |
| LLPS-Sol-0466 | Solanum lycopersicum | 91.63 | 1e-176 | 494 |
| LLPS-Sot-1530 | Solanum tuberosum | 91.63 | 1e-176 | 494 |
| LLPS-Glm-1916 | Glycine max | 90.53 | 8e-174 | 488 |
| LLPS-Via-0518 | Vigna angularis | 90.19 | 3e-174 | 488 |
| LLPS-Brr-0537 | Brassica rapa | 88.21 | 1e-171 | 482 |
| LLPS-Orni-0175 | Oryza nivara | 88.03 | 6e-165 | 465 |
| LLPS-Ori-0276 | Oryza indica | 88.03 | 6e-165 | 465 |
| LLPS-Orgl-0648 | Oryza glumaepatula | 88.03 | 1e-163 | 466 |
| LLPS-Orp-1072 | Oryza punctata | 88.03 | 3e-166 | 468 |
| LLPS-Sob-1537 | Sorghum bicolor | 87.74 | 2e-168 | 474 |
| LLPS-Orb-1544 | Oryza barthii | 87.69 | 4e-163 | 461 |
| LLPS-Org-0729 | Oryza glaberrima | 87.69 | 4e-163 | 461 |
| LLPS-Ors-2118 | Oryza sativa | 87.64 | 2e-164 | 464 |
| LLPS-Orr-1909 | Oryza rufipogon | 87.64 | 2e-164 | 464 |
| LLPS-Arl-0207 | Arabidopsis lyrata | 87.45 | 2e-170 | 479 |
| LLPS-Amt-1946 | Amborella trichopoda | 87.45 | 2e-170 | 479 |
| LLPS-Art-1494 | Arabidopsis thaliana | 87.45 | 3e-170 | 478 |
| LLPS-Zem-1690 | Zea mays | 87.4 | 2e-166 | 469 |
| LLPS-Orbr-2043 | Oryza brachyantha | 87.31 | 4e-165 | 466 |
| LLPS-Sei-1783 | Setaria italica | 86.57 | 4e-168 | 473 |
| LLPS-Brd-0454 | Brachypodium distachyon | 86.49 | 2e-162 | 459 |
| LLPS-Lep-1787 | Leersia perrieri | 86.49 | 5e-165 | 465 |
| LLPS-Tra-0786 | Triticum aestivum | 85.06 | 3e-163 | 461 |
| LLPS-Tru-0986 | Triticum urartu | 85.06 | 7e-163 | 459 |
| LLPS-Hov-0774 | Hordeum vulgare | 81.92 | 6e-160 | 452 |
| LLPS-Sem-2413 | Selaginella moellendorffii | 81.85 | 1e-145 | 416 |
| LLPS-Mua-2477 | Musa acuminata | 80.0 | 2e-144 | 412 |
| LLPS-Orm-1024 | Oryza meridionalis | 77.09 | 2e-115 | 339 |
| LLPS-Brn-2149 | Brassica napus | 76.05 | 1e-139 | 400 |
| LLPS-Chr-1606 | Chlamydomonas reinhardtii | 76.02 | 5e-113 | 333 |
| LLPS-Php-1898 | Physcomitrella patens | 74.51 | 5e-136 | 393 |
| LLPS-Bro-2050 | Brassica oleracea | 73.36 | 1e-118 | 347 |
| LLPS-Vir-1665 | Vigna radiata | 52.86 | 7e-59 | 195 |
| LLPS-Dac-1825 | Daucus carota | 50.46 | 2e-50 | 177 |
| LLPS-Osl-0975 | Ostreococcus lucimarinus | 40.62 | 2e-30 | 121 |