DrLLPS - Data resource of LLPS

LLPS-Pot-0118
POPTR_011G077200

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	Uncharacterized protein
Gene Name:	POPTR_011G077200
Ensembl Gene:	POPTR_011G077200v3
Ensembl Protein:	PNT12296
Organism:	Populus trichocarpa
Taxa ID:	3694
LLPS Type:	LLPS regulator

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nuclear speckle, P-body, Stress granule, Others	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Drosophila melanogaster	LLPS-Drm-0088	P48598	Regulator	P-body, Stress granule, Sponge body	40.98	7e-35	130
Caenorhabditis elegans	LLPS-Cae-0285	O45551	Client	P granule	40.26	2e-35	131
Rattus norvegicus	LLPS-Ran-0010	P63074	Client	Neuronal granule, Stress granule	44.39	4e-43	150
Arabidopsis thaliana	LLPS-Art-0101	O23252	Client	Stress granule	78.09	4e-101	300
Mus musculus	LLPS-Mum-1951	P63073	Client	Nuclear speckle, PML nuclear body, Chromatoid body	44.39	4e-43	150

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	PNT12296	PNT12296
Ensembl	PNT12297	PNT12297
UniProt		B9I127, B9I127_POPTR
GeneBank	CM009300	PNT12297.1
RefSeq	XM_002316710.2	XP_002316746.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MDVEDPQKLA TEKTPNPNTE DDLEEGEIVA GGDDDSSLKK SVSLPYQPHP LEHQWTFWFD 60 61 NPSAKSKQAS WGSSLRSIFT FSTIEEFWSV YNNIHHPSKL AVGADFHCFK DKIEPKWEDP 120 121 ICANGGKWSV TLSKGKSDTF WLNTLLALIG EQFDHGDEIC GAVVSVRARQ EKIAIWTKNA 180 181 SNETAQVSIG KQWKEFLDYN ETIGFIFHDD AKKDRNAKNR YSV 223
Nucleotide CDS Sequence (FASTA)
1 ATGGATGTTG AAGACCCACA AAAATTAGCA ACAGAAAAAA CTCCAAACCC TAACACCGAA 60 61 GACGATCTAG AAGAAGGAGA GATCGTTGCA GGAGGAGATG ACGACTCATC GTTAAAGAAA 120 121 TCAGTTTCTT TACCATACCA GCCTCACCCA CTTGAACATC AATGGACTTT CTGGTTCGAT 180 181 AATCCATCTG CCAAATCCAA ACAAGCCAGT TGGGGTAGCA GCCTGCGCTC CATCTTCACT 240 241 TTTTCTACTA TTGAGGAGTT TTGGAGTGTT TACAACAATA TACATCACCC GAGCAAGCTG 300 301 GCTGTTGGAG CAGACTTTCA TTGCTTCAAA GATAAAATTG AGCCAAAATG GGAGGACCCT 360 361 ATTTGTGCTA ATGGAGGGAA GTGGAGTGTA ACTCTTAGTA AAGGAAAATC TGATACTTTT 420 421 TGGTTGAATA CGTTGTTGGC ATTGATTGGA GAGCAGTTTG ATCATGGAGA TGAAATTTGT 480 481 GGAGCAGTGG TCAGTGTGAG GGCTAGGCAG GAAAAGATTG CTATCTGGAC TAAGAATGCT 540 541 TCAAATGAAA CTGCTCAGGT GAGCATTGGA AAACAGTGGA AGGAGTTTCT CGATTACAAT 600 601 GAGACTATTG GGTTCATATT CCATGATGAT GCGAAGAAAG ACAGAAATGC CAAGAATCGC 660 661 TACTCAGTAT GA 672

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Coc-0283	Corchorus capsularis	85.39	4e-113	330
LLPS-Viv-0817	Vitis vinifera	83.8	6e-113	330
LLPS-Gor-1767	Gossypium raimondii	83.71	3e-109	322
LLPS-Nia-1036	Nicotiana attenuata	83.52	9e-110	322
LLPS-Thc-1751	Theobroma cacao	81.56	1e-106	314
LLPS-Vir-1543	Vigna radiata	81.48	3e-77	238
LLPS-Hea-0945	Helianthus annuus	80.68	5e-106	312
LLPS-Cus-0531	Cucumis sativus	79.89	4e-105	310
LLPS-Org-0418	Oryza glaberrima	78.74	2e-101	301
LLPS-Ors-0322	Oryza sativa	78.74	2e-101	301
LLPS-Orni-0718	Oryza nivara	78.74	2e-101	301
LLPS-Orb-1416	Oryza barthii	78.74	2e-101	301
LLPS-Ori-1055	Oryza indica	78.74	2e-101	301
LLPS-Orm-0088	Oryza meridionalis	78.16	3e-101	300
LLPS-Orgl-0501	Oryza glumaepatula	78.16	1e-101	301
LLPS-Art-0101	Arabidopsis thaliana	78.09	9e-101	299
LLPS-Orr-0592	Oryza rufipogon	78.03	1e-98	301
LLPS-Orp-1888	Oryza punctata	77.37	8e-77	239
LLPS-Mua-0850	Musa acuminata	76.84	2e-104	308
LLPS-Hov-1045	Hordeum vulgare	76.7	1e-100	298
LLPS-Sot-1338	Solanum tuberosum	76.7	8e-103	304
LLPS-Brr-0789	Brassica rapa	76.4	3e-97	290
LLPS-Brd-1359	Brachypodium distachyon	75.84	8e-102	301
LLPS-Mae-1110	Manihot esculenta	74.89	2e-122	354
LLPS-Via-1309	Vigna angularis	74.6	5e-101	300
LLPS-Tra-0026	Triticum aestivum	73.86	4e-98	291
LLPS-Sol-0127	Solanum lycopersicum	72.97	1e-114	333
LLPS-Met-1053	Medicago truncatula	72.69	3e-112	328
LLPS-Lep-1059	Leersia perrieri	71.65	1e-100	299
LLPS-Orbr-0260	Oryza brachyantha	71.08	9e-103	304
LLPS-Phv-1590	Phaseolus vulgaris	70.43	4e-107	315
LLPS-Amt-0244	Amborella trichopoda	70.06	3e-79	243
LLPS-Glm-1128	Glycine max	69.2	8e-110	322
LLPS-Sei-0644	Setaria italica	68.78	2e-107	315
LLPS-Zem-0006	Zea mays	68.49	2e-106	313
LLPS-Sob-0488	Sorghum bicolor	66.67	2e-104	308
LLPS-Prp-1372	Prunus persica	66.38	1e-100	299
LLPS-Arl-1493	Arabidopsis lyrata	66.38	7e-102	302
LLPS-Bro-0712	Brassica oleracea	65.11	4e-99	295
LLPS-Dac-0296	Daucus carota	65.09	1e-103	306
LLPS-Brn-0607	Brassica napus	64.68	2e-98	293
LLPS-Php-1044	Physcomitrella patens	61.86	1e-89	270
LLPS-Sem-0001	Selaginella moellendorffii	58.77	7e-86	260
LLPS-Tru-0808	Triticum urartu	55.62	8e-69	217
LLPS-Osl-1436	Ostreococcus lucimarinus	53.49	4e-40	140
LLPS-Chr-0718	Chlamydomonas reinhardtii	50.55	2e-59	192
LLPS-Ora-1479	Ornithorhynchus anatinus	46.67	6e-39	139
LLPS-Dar-0925	Danio rerio	45.99	8e-47	160
LLPS-Scf-2705	Scleropages formosus	45.99	2e-47	162
LLPS-Asm-0537	Astyanax mexicanus	45.99	1e-46	160
LLPS-Ten-0600	Tetraodon nigroviridis	45.74	1e-46	159
LLPS-Tag-1798	Taeniopygia guttata	44.97	3e-44	152
LLPS-Lac-1425	Latimeria chalumnae	44.92	4e-44	153
LLPS-Icp-1148	Ictalurus punctatus	44.92	3e-46	159
LLPS-Orl-1026	Oryzias latipes	44.62	1e-45	157
LLPS-Sah-0210	Sarcophilus harrisii	44.62	7e-43	150
LLPS-Orc-1232	Oryctolagus cuniculus	44.57	5e-42	149
LLPS-Gaga-0511	Gallus gallus	44.51	2e-41	146
LLPS-Xet-0715	Xenopus tropicalis	44.39	2e-43	151
LLPS-Cas-1957	Carlito syrichta	44.39	5e-43	151
LLPS-Ict-0400	Ictidomys tridecemlineatus	44.39	3e-43	151
LLPS-Caf-1723	Canis familiaris	44.39	1e-42	150
LLPS-Eqc-1248	Equus caballus	44.39	3e-43	151
LLPS-Cap-0089	Cavia porcellus	44.39	7e-43	150
LLPS-Mam-1484	Macaca mulatta	44.39	5e-43	151
LLPS-Rhb-0528	Rhinopithecus bieti	44.39	7e-43	150
LLPS-Pat-0172	Pan troglodytes	44.39	4e-43	152
LLPS-Pap-0037	Pan paniscus	44.39	3e-43	152
LLPS-Urm-0076	Ursus maritimus	44.39	3e-43	151
LLPS-Fec-0456	Felis catus	44.39	6e-43	150
LLPS-Loa-2287	Loxodonta africana	44.39	3e-43	151
LLPS-Ran-0010	Rattus norvegicus	44.39	3e-43	151
LLPS-Paa-1741	Papio anubis	44.39	5e-43	151
LLPS-Aim-0234	Ailuropoda melanoleuca	44.39	3e-43	151
LLPS-Mup-1913	Mustela putorius furo	44.39	2e-43	151
LLPS-Ova-1033	Ovis aries	44.39	4e-43	151
LLPS-Tut-0392	Tursiops truncatus	44.39	3e-43	151
LLPS-Dio-0641	Dipodomys ordii	44.39	3e-43	151
LLPS-Bot-3612	Bos taurus	44.39	3e-43	151
LLPS-Fud-0915	Fukomys damarensis	44.39	8e-43	150
LLPS-Caj-0092	Callithrix jacchus	44.39	4e-43	151
LLPS-Mum-1951	Mus musculus	44.39	4e-43	150
LLPS-Chs-1517	Chlorocebus sabaeus	44.39	3e-43	151
LLPS-Aon-0630	Aotus nancymaae	44.39	3e-43	152
LLPS-Sus-0111	Sus scrofa	44.39	3e-43	151
LLPS-Poa-0026	Pongo abelii	44.38	3e-39	140
LLPS-Otg-1512	Otolemur garnettii	43.85	1e-42	149
LLPS-Meg-1953	Meleagris gallopavo	43.85	9e-43	150
LLPS-Anp-1803	Anas platyrhynchos	43.85	9e-43	150
LLPS-Myl-0579	Myotis lucifugus	43.85	2e-42	149
LLPS-Leo-1562	Lepisosteus oculatus	43.85	8e-46	157
LLPS-Pof-2747	Poecilia formosa	43.78	4e-43	150
LLPS-Xim-0593	Xiphophorus maculatus	43.78	4e-43	150
LLPS-Fia-0455	Ficedula albicollis	43.48	5e-44	153
LLPS-Mod-0473	Monodelphis domestica	43.39	3e-42	149
LLPS-Gaa-0992	Gasterosteus aculeatus	43.32	1e-44	154
LLPS-Orn-2197	Oreochromis niloticus	43.24	3e-42	149
LLPS-Scm-0115	Scophthalmus maximus	43.24	6e-43	150
LLPS-Tar-1267	Takifugu rubripes	43.24	1e-41	147
LLPS-Abg-0277	Absidia glauca	43.2	2e-44	154
LLPS-Gog-0635	Gorilla gorilla	42.7	1e-38	139
LLPS-Cym-0089	Cyanidioschyzon merolae	41.95	4e-42	148
LLPS-Anc-0356	Anolis carolinensis	41.63	2e-44	154
LLPS-Pes-2102	Pelodiscus sinensis	41.18	3e-44	154
LLPS-Tum-0695	Tuber melanosporum	40.25	5e-36	133
LLPS-Nol-3982	Nomascus leucogenys	40.22	3e-39	141
LLPS-Ere-0563	Erinaceus europaeus	40.22	4e-40	142
LLPS-Man-2597	Macaca nemestrina	39.67	4e-39	141
LLPS-Mal-0352	Mandrillus leucophaeus	39.67	4e-39	141
LLPS-Maf-0155	Macaca fascicularis	39.67	4e-39	141
LLPS-Cea-1963	Cercocebus atys	39.67	3e-39	141
LLPS-Drm-0088	Drosophila melanogaster	39.56	5e-42	149
LLPS-Hos-0335	Homo sapiens	39.05	9e-38	137
LLPS-Mea-2838	Mesocricetus auratus	38.92	2e-37	137
LLPS-Gas-0142	Galdieria sulphuraria	38.62	2e-41	146
LLPS-Chc-0106	Chondrus crispus	37.7	3e-39	140

LLPS-Pot-0118POPTR_011G077200

Protein Sequence

Nucleotide Sequence

LLPS-Pot-0118
POPTR_011G077200