LLPS-Php-0400
PHYPA_017632
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Predicted protein |
| Gene Name: | PHYPA_017632, PHYPADRAFT_169864 |
| Ensembl Gene: | Pp3c13_20520 |
| Ensembl Protein: | Pp3c13_20520V3.1 |
| Organism: | Physcomitrella patens |
| Taxa ID: | 3218 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Pp3c13_20520V3.1 | Pp3c13_20520V3.1 |
| Ensembl | Pp3c13_20520V3.4 | Pp3c13_20520V3.4 |
| Ensembl | Pp3c13_20520V3.3 | Pp3c13_20520V3.3.CDS.1 |
| Ensembl | Pp3c13_20520V3.2 | Pp3c13_20520V3.2 |
| UniProt | A9TG04, A9TG04_PHYPA | |
| GeneBank | ABEU02000013, DS545112 | EDQ57617.1, PNR42801.1 |
| RefSeq | XM_001777522.1 | XP_001777574.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MVSTIETAHE AMKEQDGEFN VMTAGADTDK QSTDDAVPVF PEDLVSETNV KIDGEAGNSA 60 61 SAPEADNEVP DVKKAEAVGS TDWNNAPVAG WASAEVDAPA VESGVLGSAP VENPPLQVYN 120 121 FYMVRVPRPT DKQGKVEISS AEQQLQDKTD LRNAHNNTVQ AARVRRNEAF EKLKAARQVE 180 181 RDWLTQVRAK QEEMKPLRDS LRKLKEAGRE VREKSRDMPT SEEELDHRIA SLEWRIQHES 240 241 IPLKEEKQLM REIKALQASR ETVRANAPLF AQVHDALGQR DELEAALKPL DAEYKKLDLE 300 301 LNAAKKVREQ AEKEYDQMNS ALSAVQDKLQ SANDKRQEAY VHKKSLKEQE YLRMKDFYDN 360 361 KRDIQEAKML ANKPNNRKEV EEYCNAQLER MLELWNTDEE WRKNYVKDNE WSTVRRFGTF 420 421 DGRGLAPDEA RPILPGNGFV PFAAGPASSQ QNGGRSVGNQ REAVPAKAEE VVAKGGKEKI 480 481 SSDPTIAVEK SVSKQDREAV KEPEASTPVL MEPVKSKEEL EREALELKEQ RRAVEMAKAK 540 541 EAEERKKRLA EKAQAKALAR AQKEAEKKEK EKEKKALKKA AAVTPLESES AAEKAPTAES 600 601 NGNGSSAEVE EQVAKEVKVS SSQRKRGMTN ASKAAAKIAR AKAPMPSVRA KQQKVLGMPV 660 661 QWAVGAAVGA VLLAVLVYFL LSRSSASGSG GFEDGARSNA RPGASSESF 709 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGTAAGGG TCCCTCGACC CACGGACAAG CAAGGGAAGG TGGAGATATC GTCAGCTGAA 60 61 CAGCAGTTAC AGGATAAGAC GGATTTGCGC AACGCCCACA ACAACACCGT GCAGGCTGCC 120 121 AGAGTGAGGC GGAACGAAGC GTTTGAGAAG CTGAAGGCTG CTCGGCAGGT GGAACGGGAC 180 181 TGGCTAACTC AAGTTCGTGC GAAGCAGGAG GAGATGAAGC CGCTGAGGGA CAGCCTTCGT 240 241 AAATTGAAGG AGGCCGGGCG GGAGGTGCGA GAGAAGAGTC GAGACATGCC GACGTCGGAA 300 301 GAGGAGTTGG ACCACCGAAT CGCATCCCTG GAGTGGAGGA TTCAGCACGA GAGCATCCCC 360 361 TTGAAGGAAG AGAAGCAGCT GATGAGGGAA ATCAAGGCGC TGCAGGCTTC GCGCGAGACA 420 421 GTTCGTGCGA ATGCACCGCT ATTCGCTCAA GTGCACGATG CTCTAGGGCA GCGGGACGAG 480 481 CTGGAGGCTG CTCTGAAGCC CTTGGACGCG GAATACAAGA AGCTGGACTT GGAGTTGAAT 540 541 GCAGCTAAGA AGGTGCGGGA GCAGGCGGAA AAGGAGTACG ATCAAATGAA TAGTGCCCTG 600 601 AGCGCTGTGC AGGACAAGCT GCAGTCGGCA AATGACAAGA GGCAGGAAGC TTACGTGCAC 660 661 AAGAAATCTC TCAAGGAGCA GGAGTACCTG CGGATGAAGG ACTTTTATGA CAACAAGAGG 720 721 GACATCCAGG AAGCTAAGAT GCTGGCGAAT AAGCCAAATA ACAGGAAGGA AGTAGAGGAG 780 781 TACTGCAACG CACAGTTGGA GCGGATGCTA GAGTTGTGGA ACACCGACGA GGAGTGGCGG 840 841 AAGAACTACG TGAAGGACAA CGAGTGGAGC ACGGTTCGGC GGTTCGGGAC GTTTGATGGG 900 901 CGGGGTCTGG CGCCAGACGA AGCGCGTCCG ATTTTGCCTG GGAACGGGTT CGTTCCTTTC 960 961 GCTGCGGGGC CTGCCTCATC GCAGCAGAAC GGAGGTCGGA GCGTGGGCAA CCAGCGAGAG 1020 1021 GCAGTGCCGG CGAAAGCGGA AGAGGTGGTA GCAAAAGGTG GCAAGGAGAA GATTTCTAGT 1080 1081 GACCCAACCA TAGCGGTGGA GAAGAGTGTA TCGAAACAAG ATCGGGAGGC GGTGAAGGAG 1140 1141 CCAGAGGCCA GTACACCAGT CTTGATGGAG CCAGTGAAGT CGAAAGAAGA GCTGGAGCGT 1200 1201 GAGGCCCTAG AGCTGAAGGA GCAGAGAAGG GCAGTGGAGA TGGCGAAAGC GAAGGAGGCA 1260 1261 GAGGAACGGA AGAAACGTCT GGCGGAGAAG GCACAGGCTA AGGCTTTGGC CCGGGCACAG 1320 1321 AAGGAGGCAG AGAAGAAGGA AAAAGAGAAG GAGAAGAAAG CGCTTAAGAA GGCTGCAGCA 1380 1381 GTGACTCCTC TAGAGTCCGA GAGCGCGGCA GAAAAAGCAC CTACCGCCGA GAGCAATGGC 1440 1441 AACGGGAGTT CGGCAGAGGT TGAGGAGCAG GTTGCGAAGG AGGTGAAGGT TAGCTCGAGC 1500 1501 CAACGCAAAC GCGGGATGAC GAACGCGAGC AAGGCGGCAG CAAAGATAGC AAGGGCGAAG 1560 1561 GCGCCGATGC CTTCGGTGCG TGCGAAACAA CAGAAGGTTT TGGGGATGCC AGTCCAATGG 1620 1621 GCGGTGGGGG CTGCTGTTGG AGCAGTTTTA CTGGCTGTGT TGGTGTATTT TTTGTTGTCC 1680 1681 AGGAGTAGTG CGTCAGGATC AGGCGGTTTC GAGGATGGAG CAAGGTCCAA CGCGAGGCCA 1740 1741 GGGGCGTCGT CTGAGAGCTT TTAG 1764 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Ori-1349 | Oryza indica | 38.78 | 4e-12 | 73.9 |
| LLPS-Pot-1085 | Populus trichocarpa | 36.08 | 2e-48 | 188 |
| LLPS-Prp-0127 | Prunus persica | 35.25 | 4e-51 | 197 |
| LLPS-Amt-0033 | Amborella trichopoda | 34.92 | 5e-49 | 191 |
| LLPS-Cus-1859 | Cucumis sativus | 34.81 | 8e-41 | 165 |
| LLPS-Nia-0482 | Nicotiana attenuata | 34.69 | 2e-43 | 174 |
| LLPS-Thc-2170 | Theobroma cacao | 33.65 | 3e-43 | 173 |
| LLPS-Viv-1476 | Vitis vinifera | 33.64 | 6e-45 | 178 |
| LLPS-Coc-1354 | Corchorus capsularis | 33.55 | 3e-40 | 163 |
| LLPS-Sol-1155 | Solanum lycopersicum | 33.33 | 1e-43 | 174 |
| LLPS-Mae-0985 | Manihot esculenta | 32.91 | 1e-41 | 168 |
| LLPS-Vir-2246 | Vigna radiata | 32.72 | 6e-41 | 166 |
| LLPS-Gor-1567 | Gossypium raimondii | 32.59 | 2e-42 | 170 |
| LLPS-Sob-2207 | Sorghum bicolor | 32.59 | 5e-37 | 153 |
| LLPS-Glm-2514 | Glycine max | 32.42 | 1e-38 | 158 |
| LLPS-Phv-1556 | Phaseolus vulgaris | 32.12 | 1e-33 | 140 |
| LLPS-Sem-2126 | Selaginella moellendorffii | 32.1 | 1e-37 | 152 |
| LLPS-Hea-2478 | Helianthus annuus | 31.7 | 4e-39 | 160 |
| LLPS-Orp-1041 | Oryza punctata | 31.56 | 1e-32 | 140 |
| LLPS-Via-2281 | Vigna angularis | 31.5 | 4e-37 | 151 |
| LLPS-Art-0756 | Arabidopsis thaliana | 31.38 | 7e-40 | 162 |
| LLPS-Orgl-1986 | Oryza glumaepatula | 31.25 | 6e-33 | 140 |
| LLPS-Orm-1601 | Oryza meridionalis | 31.25 | 8e-33 | 140 |
| LLPS-Orbr-1827 | Oryza brachyantha | 31.13 | 3e-32 | 138 |
| LLPS-Orb-1488 | Oryza barthii | 30.94 | 4e-32 | 138 |
| LLPS-Orni-2086 | Oryza nivara | 30.94 | 4e-32 | 138 |
| LLPS-Orr-1582 | Oryza rufipogon | 30.94 | 4e-32 | 138 |
| LLPS-Met-1777 | Medicago truncatula | 30.89 | 2e-35 | 148 |
| LLPS-Tru-1762 | Triticum urartu | 30.77 | 1e-37 | 155 |
| LLPS-Mua-0624 | Musa acuminata | 30.72 | 4e-35 | 147 |
| LLPS-Brn-0563 | Brassica napus | 30.58 | 3e-34 | 142 |
| LLPS-Zem-2166 | Zea mays | 30.58 | 5e-34 | 144 |
| LLPS-Tra-2855 | Triticum aestivum | 30.46 | 3e-36 | 151 |
| LLPS-Arl-1591 | Arabidopsis lyrata | 30.29 | 1e-41 | 167 |
| LLPS-Brd-1256 | Brachypodium distachyon | 30.09 | 1e-30 | 133 |
| LLPS-Bro-0335 | Brassica oleracea | 29.89 | 4e-37 | 153 |
| LLPS-Dac-1228 | Daucus carota | 29.77 | 1e-31 | 135 |
| LLPS-Brr-1850 | Brassica rapa | 29.65 | 2e-38 | 157 |
| LLPS-Sei-2400 | Setaria italica | 29.56 | 1e-35 | 149 |
| LLPS-Lep-1452 | Leersia perrieri | 29.41 | 4e-29 | 129 |
| LLPS-Ors-1750 | Oryza sativa | 26.17 | 5e-22 | 105 |
| LLPS-Org-0155 | Oryza glaberrima | 25.86 | 1e-21 | 103 |
| LLPS-Hov-1845 | Hordeum vulgare | 25.77 | 6e-23 | 105 |