• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Orm-0077

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: Small nuclear ribonucleoprotein Sm D3
Ensembl Gene: OMERI02G09340
Ensembl Protein: OMERI02G09340.1
Organism: Oryza meridionalis
Taxa ID: 40149
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
Nuclear speckle, NucleolusPredicted from orthologs(View)

▼ FUNCTION

Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblOMERI02G09340.1OMERI02G09340.1
UniProtA0A0E0CHP6, A0A0E0CHP6_9ORYZ

▼ SEQUENCE

Protein Sequence (FASTA)
1     MSRSLGIPVK  LLHEAAGHVV  TVELKTGEVY  RGSMVECEDN  WNCQLDNITF  TAKDGKVSQL  60
61    EHVFIRGSRV  RFMIIPDMLK  NAPMFKRLEA  RIRGKGSAIG  VGRGRAVAMR  ARAAAGRGGG  120
121   PVGRGGAPPV  RR  132

▼ KEYWORD

ID
Family
Complete proteome
Cytoplasm
mRNA processing
mRNA splicing
Nucleus
Reference proteome
Ribonucleoprotein

▼ GENE ONTOLOGY

ID
Classification
Description
Cellular Component
Cytosol
Cellular Component
PICln-Sm protein complex
Cellular Component
SMN-Sm protein complex
Cellular Component
Spliceosomal complex
Cellular Component
U1 snRNP
Cellular Component
U4 snRNP
Biological Process
Spliceosomal snRNP assembly

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Orb-0455Oryza barthii100.08e-68 207
LLPS-Ori-0113Oryza indica100.08e-68 207
LLPS-Org-1114Oryza glaberrima100.08e-68 207
LLPS-Ors-1083Oryza sativa100.08e-68 207
LLPS-Orbr-0879Oryza brachyantha100.08e-68 207
LLPS-Orgl-1820Oryza glumaepatula98.992e-67 206
LLPS-Orni-1675Oryza nivara98.995e-67 206
LLPS-Orr-0612Oryza rufipogon98.995e-67 206
LLPS-Zem-0969Zea mays98.996e-67 206
LLPS-Orp-1051Oryza punctata98.998e-67 206
LLPS-Sei-1221Setaria italica97.981e-66 204
LLPS-Sob-0053Sorghum bicolor97.981e-66 204
LLPS-Lep-1320Leersia perrieri96.975e-66 203
LLPS-Brd-1457Brachypodium distachyon96.971e-66 204
LLPS-Tra-0761Triticum aestivum96.973e-66 204
LLPS-Tru-0674Triticum urartu96.972e-66 204
LLPS-Hov-0556Hordeum vulgare92.554e-60 187
LLPS-Hea-0129Helianthus annuus91.922e-64 199
LLPS-Mua-0025Musa acuminata90.913e-64 198
LLPS-Dac-0302Daucus carota90.914e-64 198
LLPS-Viv-1427Vitis vinifera89.94e-63 196
LLPS-Sot-0972Solanum tuberosum86.871e-61 192
LLPS-Sol-0214Solanum lycopersicum86.871e-61 192
LLPS-Prp-0098Prunus persica86.875e-62 193
LLPS-Gor-1530Gossypium raimondii86.876e-62 192
LLPS-Amt-0412Amborella trichopoda86.873e-61 191
LLPS-Nia-0465Nicotiana attenuata86.879e-62 192
LLPS-Sem-1167Selaginella moellendorffii86.736e-61 190
LLPS-Cus-0730Cucumis sativus85.862e-61 191
LLPS-Thc-0477Theobroma cacao85.862e-60 189
LLPS-Mae-0988Manihot esculenta85.865e-61 190
LLPS-Via-1289Vigna angularis84.856e-61 190
LLPS-Glm-2012Glycine max84.856e-61 190
LLPS-Coc-0211Corchorus capsularis84.853e-60 188
LLPS-Pot-1469Populus trichocarpa84.851e-60 189
LLPS-Phv-0467Phaseolus vulgaris84.856e-61 190
LLPS-Php-1072Physcomitrella patens84.782e-55 176
LLPS-Met-1154Medicago truncatula83.843e-60 188
LLPS-Arl-0447Arabidopsis lyrata82.832e-59 186
LLPS-Art-1098Arabidopsis thaliana82.837e-59 185
LLPS-Brn-0682Brassica napus81.823e-58 183
LLPS-Brr-0163Brassica rapa81.823e-58 183
LLPS-Bro-0173Brassica oleracea80.817e-58 182
LLPS-Vir-0882Vigna radiata80.773e-58 183
LLPS-Abg-0685Absidia glauca67.861e-39 135
LLPS-Chr-0035Chlamydomonas reinhardtii65.318e-44 146
LLPS-Chc-0653Chondrus crispus65.065e-35 124
LLPS-Xet-1895Xenopus tropicalis64.633e-37 129
LLPS-Yal-0521Yarrowia lipolytica64.29e-33 117
LLPS-Scc-0389Schizosaccharomyces cryophilus63.862e-35 124
LLPS-Asm-1439Astyanax mexicanus63.647e-40 136
LLPS-Dar-1334Danio rerio63.645e-40 136
LLPS-Osl-1124Ostreococcus lucimarinus63.161e-42 142
LLPS-Scf-0922Scleropages formosus62.52e-39 135
LLPS-Icp-0406Ictalurus punctatus62.58e-39 134
LLPS-Drm-1349Drosophila melanogaster61.91e-36 129
LLPS-Scp-0994Schizosaccharomyces pombe61.543e-33 118
LLPS-Tum-1111Tuber melanosporum61.44e-1776.3
LLPS-Pyt-0475Pyrenophora teres61.224e-40 136
LLPS-Crn-1292Cryptococcus neoformans61.229e-38 130
LLPS-Pytr-0944Pyrenophora triticirepentis61.224e-40 136
LLPS-Asg-1239Ashbya gossypii61.116e-35 122
LLPS-Lac-2531Latimeria chalumnae61.052e-41 140
LLPS-Otg-3148Otolemur garnettii60.642e-40 139
LLPS-Phn-0661Phaeosphaeria nodorum60.21e-39 135
LLPS-Xim-1376Xiphophorus maculatus60.03e-41 139
LLPS-Tar-1916Takifugu rubripes60.03e-41 139
LLPS-Tut-0733Tursiops truncatus60.03e-41 139
LLPS-Bot-0764Bos taurus60.04e-38 137
LLPS-Ran-3458Rattus norvegicus60.03e-41 139
LLPS-Ere-0208Erinaceus europaeus60.04e-41 139
LLPS-Mal-3428Mandrillus leucophaeus60.03e-41 139
LLPS-Paa-2039Papio anubis60.03e-41 139
LLPS-Myl-3195Myotis lucifugus60.03e-41 139
LLPS-Ova-2896Ovis aries60.03e-41 139
LLPS-Aim-2131Ailuropoda melanoleuca60.03e-41 139
LLPS-Mup-2756Mustela putorius furo60.03e-41 139
LLPS-Mea-1890Mesocricetus auratus60.03e-41 139
LLPS-Mum-0907Mus musculus60.03e-41 139
LLPS-Maf-2319Macaca fascicularis60.03e-41 139
LLPS-Ora-1771Ornithorhynchus anatinus60.03e-41 139
LLPS-Chs-3386Chlorocebus sabaeus60.03e-41 139
LLPS-Orl-1480Oryzias latipes60.03e-41 139
LLPS-Aon-0718Aotus nancymaae60.03e-41 139
LLPS-Cea-2273Cercocebus atys60.03e-41 139
LLPS-Leo-1327Lepisosteus oculatus60.03e-41 139
LLPS-Sus-2992Sus scrofa60.03e-41 139
LLPS-Gog-2860Gorilla gorilla60.03e-41 139
LLPS-Fud-3192Fukomys damarensis60.03e-41 139
LLPS-Caj-0415Callithrix jacchus60.03e-41 139
LLPS-Caf-1526Canis familiaris60.03e-41 139
LLPS-Ten-0409Tetraodon nigroviridis60.03e-41 139
LLPS-Poa-1835Pongo abelii60.03e-41 139
LLPS-Eqc-1235Equus caballus60.03e-41 139
LLPS-Cap-1183Cavia porcellus60.03e-41 139
LLPS-Mam-2263Macaca mulatta60.03e-41 139
LLPS-Cas-2194Carlito syrichta60.03e-41 139
LLPS-Gaga-3559Gallus gallus60.03e-41 139
LLPS-Ict-3322Ictidomys tridecemlineatus60.03e-41 139
LLPS-Nol-3364Nomascus leucogenys60.03e-41 139
LLPS-Tag-3161Taeniopygia guttata60.03e-41 139
LLPS-Pap-2357Pan paniscus60.03e-41 139
LLPS-Urm-0573Ursus maritimus60.02e-39 137
LLPS-Pof-1702Poecilia formosa60.03e-41 139
LLPS-Pat-0837Pan troglodytes60.03e-41 139
LLPS-Hos-1570Homo sapiens60.03e-41 139
LLPS-Fec-2725Felis catus60.03e-41 139
LLPS-Mod-0117Monodelphis domestica60.03e-41 139
LLPS-Scm-1282Scophthalmus maximus60.03e-41 139
LLPS-Man-1557Macaca nemestrina60.03e-41 139
LLPS-Loa-1923Loxodonta africana60.03e-41 139
LLPS-Anp-0685Anas platyrhynchos60.03e-41 139
LLPS-Fia-2266Ficedula albicollis60.03e-41 139
LLPS-Orc-2331Oryctolagus cuniculus60.03e-41 139
LLPS-Rhb-4025Rhinopithecus bieti60.03e-41 139
LLPS-Orn-0981Oreochromis niloticus60.03e-41 139
LLPS-Gas-0130Galdieria sulphuraria59.783e-37 129
LLPS-Gaa-0548Gasterosteus aculeatus59.382e-39 135
LLPS-Aso-1221Aspergillus oryzae59.183e-37 129
LLPS-Nec-0075Neurospora crassa59.187e-39 133
LLPS-Asf-1484Aspergillus flavus59.183e-37 129
LLPS-Asn-0243Aspergillus nidulans59.183e-37 129
LLPS-Ast-0572Aspergillus terreus59.183e-37 129
LLPS-Blg-1135Blumeria graminis58.161e-37 130
LLPS-Gag-0368Gaeumannomyces graminis58.162e-38 132
LLPS-Coo-0367Colletotrichum orbiculare58.163e-38 132
LLPS-Asni-1066Aspergillus niger58.161e-36 127
LLPS-Map-1183Magnaporthe poae58.162e-38 132
LLPS-Usm-0837Ustilago maydis58.169e-35 123
LLPS-Spr-0041Sporisorium reilianum58.168e-35 123
LLPS-Asfu-1374Aspergillus fumigatus58.161e-36 127
LLPS-Cogr-0520Colletotrichum graminicola58.163e-38 132
LLPS-Nef-1077Neosartorya fischeri58.161e-36 127
LLPS-Scj-0198Schizosaccharomyces japonicus57.899e-37 127
LLPS-Pes-0939Pelodiscus sinensis57.893e-40 137
LLPS-Mel-0721Melampsora laricipopulina57.588e-36 126
LLPS-Meg-1528Meleagris gallopavo57.413e-1776.6
LLPS-Fuv-1280Fusarium verticillioides57.141e-37 130
LLPS-Mao-0467Magnaporthe oryzae57.145e-38 131
LLPS-Trv-0471Trichoderma virens57.146e-38 131
LLPS-Fuo-0469Fusarium oxysporum57.141e-37 130
LLPS-Beb-0800Beauveria bassiana57.146e-38 131
LLPS-Trr-0846Trichoderma reesei57.146e-38 131
LLPS-Fus-0078Fusarium solani57.146e-35 129
LLPS-Put-0899Puccinia triticina56.571e-35 125
LLPS-Pug-1191Puccinia graminis56.571e-35 125
LLPS-Miv-0812Microbotryum violaceum56.382e-33 120
LLPS-Sah-2046Sarcophilus harrisii56.365e-1776.3
LLPS-Zyt-1227Zymoseptoria tritici56.126e-36 125
LLPS-Dos-0574Dothistroma septosporum56.124e-36 126
LLPS-Cis-0557Ciona savignyi55.792e-36 127
LLPS-Dio-2426Dipodomys ordii55.02e-28 106
LLPS-Kop-0238Komagataella pastoris54.744e-33 118
LLPS-Cae-1007Caenorhabditis elegans53.152e-35 125
LLPS-Sac-1053Saccharomyces cerevisiae50.546e-30 110
LLPS-Anc-1778Anolis carolinensis49.218e-1878.2
LLPS-Asc-0526Aspergillus clavatus48.311e-31 115
LLPS-Cog-0681Colletotrichum gloeosporioides46.941e-2290.9
LLPS-Cii-1968Ciona intestinalis39.539e-1160.1