LLPS-Orl-1208
HDAC2
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Histone deacetylase |
Gene Name: | HDAC2 |
Ensembl Gene: | ENSORLG00000017990.2 |
Ensembl Protein: | ENSORLP00000022529.2 |
Organism: | Oryzias latipes |
Taxa ID: | 8090 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Chromatin, Nuclear speckle, Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSORLT00000022530.2 | ENSORLP00000022529.2 |
UniProt | H2MUR3, H2MUR3_ORYLA | |
RefSeq | XM_004083916.2 | XP_004083964.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAYTVAGGTK KKVCYYYDGD VGNYYYGQGH PMKPHRIRMT HNLLLNYGLY RKMEIYRPHK 60 61 ATADEMTKYH SDDYIKFLRS IRPDNMSEFS KQMQRFNVGE DCPVFDGLFE FCQLSAGGSA 120 121 AGAVKLNRQQ TDIAVNWAGG LHHAKKSEAS GFCYVNDIVL AILELLKYHQ RVLYIDIDIH 180 181 HGDGVEEAFY TTDRVMTVSF HKYGEYFPGT GDLRDIGAGK GKYYAVNFPL RDGIDDESYE 240 241 QIFKPVMSKV MEMYQPSAVV LQCGSDSLSG DRLGCFNLTI RGHAKCVEYI KSFNLPLLML 300 301 GGGGYTIRNV ARCWTYETAV ALDTEIPDEL PYNDYFEYFG PDFKLHISPS NMTNQNTQEY 360 361 LDKIKQRLFE NLRMLPHAPG VQMQAIPEDA VPDDPLDEDK EDPDKRLSIR ATDKRIVCEE 420 421 EFSDSEDEGE GGRRNVASHK KGGKRPRLEE EKKEGEEKKA DVKEEEKTKD SNSEKTDSKS 480 481 VKTEQSSSA 489 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCGTACA CGGTTGCAGG TGGAACTAAG AAGAAGGTCT GCTACTACTA CGACGGTGAT 60 61 GTTGGAAACT ACTATTATGG ACAAGGACAC CCCATGAAGC CACATCGGAT CCGCATGACT 120 121 CACAACCTCC TCCTGAACTA TGGCCTCTAC AGAAAAATGG AGATCTATAG GCCACACAAA 180 181 GCCACCGCAG ACGAGATGAC CAAATACCAC AGTGACGACT ACATCAAGTT CCTCAGATCC 240 241 ATACGGCCAG ACAACATGTC CGAGTTCAGC AAGCAGATGC AGCGCTTCAA CGTTGGGGAG 300 301 GACTGTCCTG TGTTCGATGG CCTGTTTGAG TTCTGTCAGC TGTCAGCCGG CGGTTCTGCT 360 361 GCTGGGGCTG TGAAGCTGAA CAGGCAGCAG ACGGACATTG CCGTGAACTG GGCGGGGGGA 420 421 CTCCACCACG CCAAGAAGTC TGAGGCTTCG GGCTTCTGCT ACGTGAACGA CATTGTGTTG 480 481 GCCATCCTGG AGCTCCTCAA GTACCACCAG AGGGTGCTTT ACATCGACAT TGACATCCAC 540 541 CATGGAGATG GAGTGGAGGA GGCCTTCTAC ACCACTGACA GGGTCATGAC GGTGTCTTTC 600 601 CATAAATACG GAGAGTACTT CCCTGGAACT GGAGACCTCA GGGATATTGG AGCTGGAAAA 660 661 GGCAAATACT ACGCTGTAAA CTTTCCCCTG CGGGATGGGA TTGATGACGA GTCATACGAG 720 721 CAAATCTTCA AACCCGTGAT GTCAAAGGTG ATGGAGATGT ACCAGCCCAG TGCTGTGGTT 780 781 CTGCAGTGCG GTTCAGACTC CCTGTCAGGA GACCGCCTCG GATGCTTCAA CCTCACCATC 840 841 CGCGGTCATG CCAAATGCGT GGAGTACATC AAGTCCTTCA ACCTCCCGTT GCTCATGCTG 900 901 GGGGGAGGAG GATATACCAT TCGCAATGTG GCGCGCTGCT GGACTTACGA GACTGCTGTG 960 961 GCTCTGGACA CGGAAATCCC AGACGAACTG CCTTACAACG ACTACTTTGA GTACTTTGGA 1020 1021 CCCGACTTCA AGCTGCACAT CAGCCCCTCC AACATGACCA ACCAGAACAC ACAGGAGTAC 1080 1081 CTGGATAAGA TCAAGCAGCG CCTGTTCGAG AACCTGCGGA TGCTTCCTCA CGCTCCAGGA 1140 1141 GTTCAGATGC AGGCCATCCC AGAGGACGCC GTCCCAGACG ATCCGCTGGA CGAGGACAAG 1200 1201 GAGGATCCCG ACAAACGCCT GTCTATTCGG GCCACGGATA AGAGGATAGT CTGCGAGGAG 1260 1261 GAGTTCTCCG ATTCAGAGGA CGAAGGGGAG GGAGGCCGGA GGAACGTGGC CAGCCACAAG 1320 1321 AAGGGAGGCA AGCGGCCCCG CCTGGAGGAG GAAAAGAAGG AGGGAGAGGA GAAGAAAGCT 1380 1381 GATGTAAAGG AAGAGGAGAA GACGAAGGAC AGCAACTCAG AGAAAACGGA TTCCAAAAGT 1440 1441 GTGAAGACGG AGCAGAGCAG CAGCGCCTGA 1470 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Sah-2250 | Sarcophilus harrisii | 95.29 | 0.0 | 606 |
LLPS-Asm-1830 | Astyanax mexicanus | 94.99 | 0.0 | 767 |
LLPS-Ict-3242 | Ictidomys tridecemlineatus | 94.98 | 0.0 | 615 |
LLPS-Orn-1466 | Oreochromis niloticus | 94.49 | 0.0 | 800 |
LLPS-Leo-2907 | Lepisosteus oculatus | 93.85 | 0.0 | 765 |
LLPS-Tar-2918 | Takifugu rubripes | 93.05 | 0.0 | 782 |
LLPS-Sus-0983 | Sus scrofa | 92.94 | 0.0 | 760 |
LLPS-Mum-1267 | Mus musculus | 92.94 | 0.0 | 763 |
LLPS-Ova-1923 | Ovis aries | 92.94 | 0.0 | 762 |
LLPS-Ran-1575 | Rattus norvegicus | 92.94 | 0.0 | 763 |
LLPS-Chs-2253 | Chlorocebus sabaeus | 92.8 | 0.0 | 757 |
LLPS-Bot-2610 | Bos taurus | 92.8 | 0.0 | 754 |
LLPS-Man-0881 | Macaca nemestrina | 92.8 | 0.0 | 756 |
LLPS-Mam-0862 | Macaca mulatta | 92.8 | 0.0 | 754 |
LLPS-Aon-0757 | Aotus nancymaae | 92.7 | 0.0 | 761 |
LLPS-Cea-0582 | Cercocebus atys | 92.7 | 0.0 | 761 |
LLPS-Maf-0754 | Macaca fascicularis | 92.7 | 0.0 | 761 |
LLPS-Caj-2429 | Callithrix jacchus | 92.7 | 0.0 | 761 |
LLPS-Fud-1317 | Fukomys damarensis | 92.7 | 0.0 | 762 |
LLPS-Mal-0408 | Mandrillus leucophaeus | 92.7 | 0.0 | 761 |
LLPS-Pat-1168 | Pan troglodytes | 92.7 | 0.0 | 761 |
LLPS-Pap-0264 | Pan paniscus | 92.7 | 0.0 | 761 |
LLPS-Orc-1184 | Oryctolagus cuniculus | 92.7 | 0.0 | 761 |
LLPS-Otg-1104 | Otolemur garnettii | 92.7 | 0.0 | 761 |
LLPS-Cap-3488 | Cavia porcellus | 92.7 | 0.0 | 762 |
LLPS-Nol-0785 | Nomascus leucogenys | 92.7 | 0.0 | 761 |
LLPS-Cas-0322 | Carlito syrichta | 92.7 | 0.0 | 761 |
LLPS-Scf-0724 | Scleropages formosus | 92.64 | 0.0 | 812 |
LLPS-Gog-0520 | Gorilla gorilla | 92.46 | 0.0 | 761 |
LLPS-Fec-0990 | Felis catus | 92.46 | 0.0 | 759 |
LLPS-Hos-0070 | Homo sapiens | 92.46 | 0.0 | 761 |
LLPS-Xim-0038 | Xiphophorus maculatus | 92.45 | 0.0 | 790 |
LLPS-Ora-2502 | Ornithorhynchus anatinus | 92.4 | 0.0 | 732 |
LLPS-Tut-1638 | Tursiops truncatus | 92.27 | 0.0 | 698 |
LLPS-Ten-2051 | Tetraodon nigroviridis | 92.24 | 0.0 | 778 |
LLPS-Icp-0157 | Ictalurus punctatus | 92.23 | 0.0 | 781 |
LLPS-Caf-0836 | Canis familiaris | 92.23 | 0.0 | 754 |
LLPS-Mup-2619 | Mustela putorius furo | 92.21 | 0.0 | 758 |
LLPS-Urm-1664 | Ursus maritimus | 92.21 | 0.0 | 756 |
LLPS-Eqc-0226 | Equus caballus | 92.21 | 0.0 | 758 |
LLPS-Gaga-0417 | Gallus gallus | 92.11 | 0.0 | 763 |
LLPS-Pof-0715 | Poecilia formosa | 92.06 | 0.0 | 783 |
LLPS-Myl-3579 | Myotis lucifugus | 92.01 | 0.0 | 754 |
LLPS-Xet-1787 | Xenopus tropicalis | 91.95 | 0.0 | 745 |
LLPS-Anp-1140 | Anas platyrhynchos | 91.93 | 0.0 | 757 |
LLPS-Meg-3213 | Meleagris gallopavo | 91.93 | 0.0 | 757 |
LLPS-Paa-2987 | Papio anubis | 91.8 | 0.0 | 747 |
LLPS-Tag-0350 | Taeniopygia guttata | 91.65 | 0.0 | 761 |
LLPS-Anc-2277 | Anolis carolinensis | 91.65 | 0.0 | 760 |
LLPS-Scm-1934 | Scophthalmus maximus | 91.55 | 0.0 | 743 |
LLPS-Loa-2283 | Loxodonta africana | 91.48 | 0.0 | 754 |
LLPS-Dar-2530 | Danio rerio | 91.2 | 0.0 | 736 |
LLPS-Fia-2124 | Ficedula albicollis | 91.15 | 0.0 | 751 |
LLPS-Gaa-1684 | Gasterosteus aculeatus | 90.66 | 0.0 | 736 |
LLPS-Aim-3628 | Ailuropoda melanoleuca | 90.55 | 0.0 | 748 |
LLPS-Pes-2499 | Pelodiscus sinensis | 90.02 | 0.0 | 738 |
LLPS-Mod-4318 | Monodelphis domestica | 89.49 | 0.0 | 728 |
LLPS-Ere-0743 | Erinaceus europaeus | 89.32 | 0.0 | 750 |
LLPS-Mea-0720 | Mesocricetus auratus | 88.93 | 0.0 | 761 |
LLPS-Rhb-2008 | Rhinopithecus bieti | 88.93 | 0.0 | 758 |
LLPS-Poa-2413 | Pongo abelii | 88.93 | 0.0 | 754 |
LLPS-Dio-0059 | Dipodomys ordii | 88.73 | 0.0 | 756 |
LLPS-Cii-0886 | Ciona intestinalis | 87.47 | 0.0 | 706 |
LLPS-Drm-2032 | Drosophila melanogaster | 83.62 | 0.0 | 705 |
LLPS-Cis-1284 | Ciona savignyi | 82.39 | 0.0 | 702 |
LLPS-Ori-0917 | Oryza indica | 70.86 | 0.0 | 542 |
LLPS-Asf-0447 | Aspergillus flavus | 70.72 | 0.0 | 585 |
LLPS-Asc-1660 | Aspergillus clavatus | 70.44 | 0.0 | 582 |
LLPS-Nef-1460 | Neosartorya fischeri | 70.44 | 0.0 | 582 |
LLPS-Asfu-0978 | Aspergillus fumigatus | 70.17 | 0.0 | 581 |
LLPS-Orb-0749 | Oryza barthii | 70.13 | 0.0 | 553 |
LLPS-Orgl-0527 | Oryza glumaepatula | 70.13 | 0.0 | 552 |
LLPS-Ors-0324 | Oryza sativa | 70.13 | 0.0 | 552 |
LLPS-Orr-0198 | Oryza rufipogon | 70.13 | 0.0 | 552 |
LLPS-Orni-1609 | Oryza nivara | 70.08 | 0.0 | 546 |
LLPS-Glm-0976 | Glycine max | 69.97 | 0.0 | 550 |
LLPS-Via-1426 | Vigna angularis | 69.97 | 0.0 | 549 |
LLPS-Vir-0883 | Vigna radiata | 69.97 | 0.0 | 549 |
LLPS-Orm-0001 | Oryza meridionalis | 69.95 | 0.0 | 547 |
LLPS-Lep-0160 | Leersia perrieri | 69.92 | 0.0 | 543 |
LLPS-Zem-0391 | Zea mays | 69.87 | 0.0 | 540 |
LLPS-Brd-0375 | Brachypodium distachyon | 69.71 | 0.0 | 546 |
LLPS-Phv-0596 | Phaseolus vulgaris | 69.71 | 0.0 | 545 |
LLPS-Cae-1608 | Caenorhabditis elegans | 69.61 | 0.0 | 575 |
LLPS-Asni-1271 | Aspergillus niger | 69.61 | 0.0 | 580 |
LLPS-Osl-1151 | Ostreococcus lucimarinus | 69.61 | 0.0 | 563 |
LLPS-Cog-0886 | Colletotrichum gloeosporioides | 69.55 | 0.0 | 563 |
LLPS-Met-2183 | Medicago truncatula | 69.49 | 0.0 | 552 |
LLPS-Orp-0639 | Oryza punctata | 69.49 | 0.0 | 553 |
LLPS-Gor-1338 | Gossypium raimondii | 69.45 | 0.0 | 543 |
LLPS-Coo-0930 | Colletotrichum orbiculare | 69.27 | 0.0 | 566 |
LLPS-Sem-1857 | Selaginella moellendorffii | 69.25 | 0.0 | 548 |
LLPS-Asn-1288 | Aspergillus nidulans | 69.25 | 0.0 | 583 |
LLPS-Sob-1220 | Sorghum bicolor | 69.25 | 0.0 | 544 |
LLPS-Orbr-0499 | Oryza brachyantha | 69.23 | 0.0 | 553 |
LLPS-Sei-0465 | Setaria italica | 69.19 | 0.0 | 543 |
LLPS-Nia-0020 | Nicotiana attenuata | 69.09 | 0.0 | 543 |
LLPS-Abg-0575 | Absidia glauca | 68.95 | 0.0 | 565 |
LLPS-Mae-1878 | Manihot esculenta | 68.95 | 0.0 | 536 |
LLPS-Cus-1473 | Cucumis sativus | 68.93 | 0.0 | 540 |
LLPS-Sot-1062 | Solanum tuberosum | 68.83 | 0.0 | 542 |
LLPS-Viv-0904 | Vitis vinifera | 68.83 | 0.0 | 537 |
LLPS-Tra-2091 | Triticum aestivum | 68.72 | 0.0 | 571 |
LLPS-Hov-0580 | Hordeum vulgare | 68.72 | 0.0 | 571 |
LLPS-Scs-0289 | Sclerotinia sclerotiorum | 68.6 | 0.0 | 568 |
LLPS-Dos-0537 | Dothistroma septosporum | 68.6 | 0.0 | 566 |
LLPS-Sol-0178 | Solanum lycopersicum | 68.57 | 0.0 | 541 |
LLPS-Thc-1698 | Theobroma cacao | 68.57 | 0.0 | 540 |
LLPS-Tum-0986 | Tuber melanosporum | 68.45 | 0.0 | 561 |
LLPS-Prp-0981 | Prunus persica | 68.41 | 0.0 | 536 |
LLPS-Php-0014 | Physcomitrella patens | 68.33 | 0.0 | 567 |
LLPS-Pyt-0876 | Pyrenophora teres | 68.31 | 0.0 | 539 |
LLPS-Ved-1165 | Verticillium dahliae | 68.16 | 0.0 | 564 |
LLPS-Dac-0743 | Daucus carota | 68.15 | 0.0 | 536 |
LLPS-Phn-0383 | Phaeosphaeria nodorum | 68.12 | 0.0 | 542 |
LLPS-Hea-2429 | Helianthus annuus | 67.97 | 0.0 | 533 |
LLPS-Ast-1131 | Aspergillus terreus | 67.96 | 0.0 | 550 |
LLPS-Zyt-0759 | Zymoseptoria tritici | 67.87 | 0.0 | 552 |
LLPS-Fuv-0361 | Fusarium verticillioides | 67.72 | 0.0 | 555 |
LLPS-Beb-0714 | Beauveria bassiana | 67.72 | 0.0 | 555 |
LLPS-Trr-0531 | Trichoderma reesei | 67.72 | 0.0 | 551 |
LLPS-Trv-1493 | Trichoderma virens | 67.72 | 0.0 | 555 |
LLPS-Pot-1271 | Populus trichocarpa | 67.71 | 0.0 | 535 |
LLPS-Cogr-0489 | Colletotrichum graminicola | 67.7 | 0.0 | 563 |
LLPS-Blg-0870 | Blumeria graminis | 67.68 | 0.0 | 562 |
LLPS-Amt-1986 | Amborella trichopoda | 67.59 | 0.0 | 556 |
LLPS-Map-1331 | Magnaporthe poae | 67.53 | 0.0 | 562 |
LLPS-Yal-1460 | Yarrowia lipolytica | 67.44 | 0.0 | 557 |
LLPS-Gag-1066 | Gaeumannomyces graminis | 67.27 | 0.0 | 561 |
LLPS-Fus-0195 | Fusarium solani | 67.19 | 0.0 | 553 |
LLPS-Brr-0757 | Brassica rapa | 66.94 | 0.0 | 540 |
LLPS-Kop-1448 | Komagataella pastoris | 66.84 | 0.0 | 552 |
LLPS-Chc-1121 | Chondrus crispus | 66.84 | 0.0 | 547 |
LLPS-Mao-0923 | Magnaporthe oryzae | 66.75 | 0.0 | 556 |
LLPS-Bro-1342 | Brassica oleracea | 66.67 | 0.0 | 539 |
LLPS-Asg-0779 | Ashbya gossypii | 66.58 | 0.0 | 554 |
LLPS-Nec-0442 | Neurospora crassa | 66.49 | 0.0 | 551 |
LLPS-Arl-1861 | Arabidopsis lyrata | 66.39 | 0.0 | 535 |
LLPS-Art-3022 | Arabidopsis thaliana | 66.39 | 0.0 | 535 |
LLPS-Sac-0904 | Saccharomyces cerevisiae | 65.63 | 0.0 | 543 |
LLPS-Coc-0535 | Corchorus capsularis | 65.45 | 0.0 | 546 |
LLPS-Lac-0882 | Latimeria chalumnae | 65.11 | 0.0 | 537 |
LLPS-Scp-0043 | Schizosaccharomyces pombe | 64.49 | 0.0 | 531 |