DrLLPS - Data resource of LLPS

LLPS-Ori-1167
OsI_033964

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	Histone H3.2
Gene Name:	OsI_033964
Ensembl Gene:	BGIOSGA017977
Ensembl Protein:	BGIOSGA017977-PA
Organism:	Oryza indica
Taxa ID:	39946
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nucleolus	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Arabidopsis thaliana	LLPS-Art-0058	P59226	Client	Nucleolus	100.00	2e-78	235

▼ FUNCTION

Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	BGIOSGA017977-TA	BGIOSGA017977-PA
UniProt		A2Y533, H32_ORYSI, P05203, P05329, P05330, P08860, P69247, Q53WV5, Q53WY3, Q7F4Z4
GeneBank	CM000130, U25664, U77296, CM000131, CM000136	EAY80005.1, EAY99779.1, EAY99776.1, AAB18816.1, EAY98193.1, AAA74190.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MARTKQTARK STGGKAPRKQ LATKAARKSA PATGGVKKPH RFRPGTVALR EIRKYQKSTE 60 61 LLIRKLPFQR LVREIAQDFK TDLRFQSSAV AALQEAAEAY LVGLFEDTNL CAIHAKRVTI 120 121 MPKDIQLARR IRGERA 136
Nucleotide CDS Sequence (FASTA)
1 ATGGCCCGCA CGAAGCAGAC GGCGAGGAAG TCCACCGGCG GCAAGGCGCC GAGGAAGCAG 60 61 CTGGCGACGA AGGCGGCGCG CAAGTCGGCC CCGGCGACCG GCGGCGTGAA GAAGCCCCAC 120 121 CGCTTCAGGC CGGGAACCGT CGCGCTCCGG GAGATCCGCA AGTACCAGAA GAGCACGGAG 180 181 CTGCTCATCC GCAAGCTGCC GTTCCAGCGG CTGGTGCGGG AGATCGCGCA GGACTTCAAG 240 241 ACCGACCTCC GCTTCCAGAG CTCCGCCGTC GCCGCGCTGC AGGAGGCCGC CGAGGCCTAC 300 301 CTCGTCGGGC TCTTCGAGGA CACCAACCTC TGCGCCATCC ACGCCAAGCG CGTCACCATC 360 361 ATGCCCAAGG ACATCCAGCT CGCCCGCCGC ATCCGTGGCG AGAGGGCGTA G 411

▼ KEYWORD

ID	Family
KW-0007	Acetylation
KW-0158	Chromosome
KW-0181	Complete proteome
KW-0238	DNA-binding
KW-0488	Methylation
KW-0544	Nucleosome core
KW-0539	Nucleus
KW-0597	Phosphoprotein
KW-1185	Reference proteome

▼ GENE ONTOLOGY

ID	Classification	Description
GO:0000786	Cellular Component	Nucleosome
GO:0005634	Cellular Component	Nucleus
GO:0003677	Molecular Function	DNA binding
GO:0046982	Molecular Function	Protein heterodimerization activity

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Thc-2085	Theobroma cacao	100.0	2e-78	235
LLPS-Orni-1789	Oryza nivara	100.0	2e-78	235
LLPS-Dac-1143	Daucus carota	100.0	2e-78	235
LLPS-Brn-0944	Brassica napus	100.0	2e-78	235
LLPS-Orb-0723	Oryza barthii	100.0	2e-78	235
LLPS-Sol-1065	Solanum lycopersicum	100.0	2e-78	235
LLPS-Arl-2509	Arabidopsis lyrata	100.0	2e-78	235
LLPS-Sei-0329	Setaria italica	100.0	5e-78	236
LLPS-Cus-2260	Cucumis sativus	100.0	1e-78	236
LLPS-Lep-0497	Leersia perrieri	100.0	2e-78	235
LLPS-Sot-0627	Solanum tuberosum	100.0	2e-78	235
LLPS-Orgl-2102	Oryza glumaepatula	100.0	2e-78	235
LLPS-Amt-1774	Amborella trichopoda	100.0	2e-78	235
LLPS-Mae-2662	Manihot esculenta	100.0	2e-78	235
LLPS-Nia-0476	Nicotiana attenuata	100.0	2e-78	235
LLPS-Orbr-1244	Oryza brachyantha	100.0	3e-77	236
LLPS-Sob-1818	Sorghum bicolor	100.0	2e-78	235
LLPS-Orp-1274	Oryza punctata	100.0	2e-78	235
LLPS-Pot-0383	Populus trichocarpa	100.0	6e-77	236
LLPS-Viv-1734	Vitis vinifera	100.0	2e-78	235
LLPS-Art-0058	Arabidopsis thaliana	100.0	2e-78	235
LLPS-Gor-1943	Gossypium raimondii	100.0	2e-78	236
LLPS-Ors-1517	Oryza sativa	100.0	2e-77	237
LLPS-Zem-1640	Zea mays	100.0	2e-78	235
LLPS-Org-2194	Oryza glaberrima	100.0	2e-78	235
LLPS-Bro-1646	Brassica oleracea	100.0	2e-78	235
LLPS-Prp-0774	Prunus persica	100.0	2e-78	235
LLPS-Orr-1770	Oryza rufipogon	100.0	2e-78	235
LLPS-Orm-0070	Oryza meridionalis	100.0	2e-78	235
LLPS-Coc-0989	Corchorus capsularis	100.0	2e-78	235
LLPS-Hea-0310	Helianthus annuus	99.26	3e-77	234
LLPS-Glm-0325	Glycine max	99.26	2e-78	235
LLPS-Hov-1294	Hordeum vulgare	99.26	5e-78	235
LLPS-Met-2119	Medicago truncatula	99.26	2e-78	235
LLPS-Brd-1729	Brachypodium distachyon	99.26	2e-78	235
LLPS-Tra-2403	Triticum aestivum	99.26	2e-78	235
LLPS-Via-0879	Vigna angularis	99.26	2e-78	235
LLPS-Phv-1373	Phaseolus vulgaris	99.26	2e-78	235
LLPS-Sem-1569	Selaginella moellendorffii	98.53	4e-78	234
LLPS-Php-0610	Physcomitrella patens	97.79	4e-78	234
LLPS-Fud-1471	Fukomys damarensis	97.06	3e-77	232
LLPS-Icp-0990	Ictalurus punctatus	97.06	1e-77	233
LLPS-Caj-2784	Callithrix jacchus	97.06	3e-77	232
LLPS-Gog-3492	Gorilla gorilla	97.06	1e-77	233
LLPS-Orl-0115	Oryzias latipes	97.06	1e-77	233
LLPS-Cea-2960	Cercocebus atys	97.06	3e-77	232
LLPS-Cis-1993	Ciona savignyi	97.06	2e-77	233
LLPS-Sah-2481	Sarcophilus harrisii	97.06	2e-77	233
LLPS-Aon-1026	Aotus nancymaae	97.06	1e-77	233
LLPS-Sus-2818	Sus scrofa	97.06	3e-77	232
LLPS-Mea-0428	Mesocricetus auratus	97.06	1e-77	233
LLPS-Mum-2545	Mus musculus	97.06	1e-77	233
LLPS-Maf-1171	Macaca fascicularis	97.06	1e-77	233
LLPS-Chs-0044	Chlorocebus sabaeus	97.06	3e-77	232
LLPS-Ora-0435	Ornithorhynchus anatinus	97.06	1e-77	233
LLPS-Mal-0380	Mandrillus leucophaeus	97.06	1e-77	233
LLPS-Paa-3205	Papio anubis	97.06	3e-77	232
LLPS-Ova-0036	Ovis aries	97.06	2e-77	232
LLPS-Myl-0904	Myotis lucifugus	97.06	3e-77	232
LLPS-Aim-0597	Ailuropoda melanoleuca	97.06	3e-77	232
LLPS-Ran-0018	Rattus norvegicus	97.06	3e-77	232
LLPS-Ere-0379	Erinaceus europaeus	97.06	3e-77	232
LLPS-Gaa-3970	Gasterosteus aculeatus	97.06	2e-77	233
LLPS-Dio-3132	Dipodomys ordii	97.06	1e-77	233
LLPS-Bot-1053	Bos taurus	97.06	1e-77	233
LLPS-Drm-0851	Drosophila melanogaster	97.06	1e-77	233
LLPS-Tut-0600	Tursiops truncatus	97.06	1e-77	233
LLPS-Tar-1562	Takifugu rubripes	97.06	8e-78	233
LLPS-Fia-3109	Ficedula albicollis	97.06	1e-77	233
LLPS-Orc-3262	Oryctolagus cuniculus	97.06	3e-77	232
LLPS-Rhb-0859	Rhinopithecus bieti	97.06	3e-77	232
LLPS-Otg-0868	Otolemur garnettii	97.06	3e-77	232
LLPS-Pes-3239	Pelodiscus sinensis	97.06	1e-77	233
LLPS-Man-0003	Macaca nemestrina	97.06	1e-77	233
LLPS-Loa-0098	Loxodonta africana	97.06	1e-77	233
LLPS-Anp-0891	Anas platyrhynchos	97.06	1e-77	233
LLPS-Urm-0460	Ursus maritimus	97.06	3e-77	232
LLPS-Pap-2305	Pan paniscus	97.06	3e-77	232
LLPS-Pat-0990	Pan troglodytes	97.06	1e-77	233
LLPS-Pof-2981	Poecilia formosa	97.06	1e-77	233
LLPS-Dar-3826	Danio rerio	97.06	1e-77	233
LLPS-Meg-0970	Meleagris gallopavo	97.06	1e-77	233
LLPS-Hos-2780	Homo sapiens	97.06	1e-77	233
LLPS-Mod-2272	Monodelphis domestica	97.06	1e-77	233
LLPS-Fec-1371	Felis catus	97.06	1e-77	233
LLPS-Ict-1339	Ictidomys tridecemlineatus	97.06	1e-77	233
LLPS-Nol-2646	Nomascus leucogenys	97.06	1e-77	233
LLPS-Anc-1452	Anolis carolinensis	97.06	1e-77	233
LLPS-Tru-0831	Triticum urartu	97.06	1e-77	233
LLPS-Tag-0780	Taeniopygia guttata	97.06	1e-77	233
LLPS-Cas-0046	Carlito syrichta	97.06	3e-77	232
LLPS-Gaga-3013	Gallus gallus	97.06	1e-77	233
LLPS-Xet-3469	Xenopus tropicalis	97.06	1e-77	233
LLPS-Osl-0706	Ostreococcus lucimarinus	97.06	7e-78	233
LLPS-Mam-2321	Macaca mulatta	97.06	1e-77	233
LLPS-Ten-3696	Tetraodon nigroviridis	97.06	1e-77	233
LLPS-Caf-0616	Canis familiaris	97.06	1e-77	233
LLPS-Poa-0725	Pongo abelii	97.06	3e-77	232
LLPS-Eqc-1180	Equus caballus	97.06	3e-77	232
LLPS-Cap-0656	Cavia porcellus	97.06	1e-77	233
LLPS-Leo-1949	Lepisosteus oculatus	94.85	8e-77	231
LLPS-Cii-2230	Ciona intestinalis	94.85	8e-77	231
LLPS-Mup-0402	Mustela putorius furo	94.85	8e-77	231
LLPS-Scf-0248	Scleropages formosus	94.85	8e-77	231
LLPS-Orn-1719	Oreochromis niloticus	94.85	8e-77	231
LLPS-Lac-2482	Latimeria chalumnae	94.85	8e-77	231
LLPS-Scm-0925	Scophthalmus maximus	94.85	8e-77	231

LLPS-Ori-1167OsI_033964

Protein Sequence

Nucleotide Sequence

LLPS-Ori-1167
OsI_033964