LLPS-Orc-a069
LIMCH1
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | LIM and calponin homology domains 1 |
Gene Name: | LIMCH1 |
Ensembl Gene: | ENSOCUG00000015547.3 |
Ensembl Protein: | ENSOCUP00000013367.3 |
Organism: | Oryctolagus cuniculus |
Taxa ID: | 9986 |
LLPS Type: | Others |
▼ PROPERTY
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Postsynaptic density | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSOCUT00000015554.3 | ENSOCUP00000013367.3 |
UniProt | G1T9Q0, G1T9Q0_RABIT | |
GeneBank | AAGW02010698, AAGW02010699, AAGW02010696, AAGW02010704, AAGW02010703, AAGW02010702, AAGW02010701, AAGW02010697, AAGW02010700 | |
Entrez | 100358586 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MACPALGLEA LQPLQPEPPP EPAFSEAQKW IEQVTGRSFG DKDFRTGLEN GILLCELLNA 60 61 IKPGLVKKIN RLPTPIAGLD NIILFLRGCK ELGLKESQLF DPSDLQDTSN RVTVKSLDYS 120 121 RKLRNVLVTI YWLGKAANSY ASYSGTTLNL KEFEGLWAQM RKETDDIESP KRSIRDSGYI 180 181 DCWDSERSDS LSPPRHGRDD SFDSLDSFGS RSRQTPSPDV VLRGSSDGRG SDSESDLPHR 240 241 KLPDVKKDDM SARRTSHGEP KSAVPFNQYL PNKSNQTAYV PAPLRKKKAE REEYRKSWST 300 301 ATSPLGGERP FSYPETIEEE GSDMGSLGEE DPIGQMDAGG NPSDAGLELP DGSGKGQPPS 360 361 EGTTVTPTAR SEEKDAAEVQ KRRRLEQAGI KVMPAAQRFA SQKQLGEEKD TICDIILRKE 420 421 NPFLTHQHGK DSESEDEVAC RLPDLVKDDF AARRARMNQP KPTVPLNQLL YGPYRKKEAE 480 481 TSDGSKPAKG NSEKKSLEYK RNQGKAEELK SVATCITRAQ ESEPVEEGGK KVPDLYKDDL 540 541 AQRRIQGCLG PHREAPSFII PSKITEADLK TWERLQVSGK TRDGDSQQIC APEPLPEIKA 600 601 ETAIRDDFAS RKARAYKKAS GPRQKFVHFG PVTEIDQQKW KRLSIGKAGP REEVGVAGHS 660 661 SRLPAHPASP ASAAGPGLKE DPVLTRQDDC RIVNSGLDDY CQRDSRLAPV PESQEEWASS 720 721 VGECPGNTEE VTSKPAPQGG KEENEGVAPR ASAMLPEAEC PAESSQPLAC PLASEREPAG 780 781 AEEKAEESAA PAWSASGPKG QGKLSESQKD DTMARTTGES LSHPGSSPNQ CLPVPFAKQQ 840 841 EVEESAEDPP VKDRRYGPRT PVSDDAESTS LFDMRCEEEA AVLPHSRARQ EQLQLINSQL 900 901 REEDDKWQDD LARWKSRRRS ASQDLIKKEE ERKKMEKLLA GEDGTSERRK SIKTYREIVQ 960 961 EKERRERELH EAYKNARSQE EADGILQQYI ERFTISEAVL ERLEMPKILE RSHSTEPNLS 1020 1021 SFLSDPNPMK YLRQQSLPPP KFTATVETTI ARASAPDAST AAGSGSPSKT VTPKAVPMLT 1080 1081 PKPYSQPKNS QEVLKTFKVD GKVSMNGETA HGDEEEKGRE CPTVTPAVSL TTSQMFEGVA 1140 1141 RVHGSPVELK QDNNSVEINI KKPNPVPQEA TATTEETELN SHEDENDGGE PGSENVDLAA 1200 1201 SEPQHFTSTV TRCSPTVALV ELPSSPSPDE RGQKSSENEM SGKVELVLSQ KVVKPKSPEP 1260 1261 EATLTFPFLD KMHETSQLHL PNLNSQELPG TASVPLRVQN SWRRSQFFSQ SDSPSNEKSP 1320 1321 VTTPFKFWAW DPEEERRRQE KWQQEQERLL QERYQKEQDK LKEEWEKAQK EVEEEERRYY 1380 1381 EEERKIIEDT VVPFTISSSS ADQLSTSSSV TEGSGTVKKM DLENCQEEKE ERRQKEPFQG 1440 1441 DDNDLLHKTR GCDPLEEKGS SLMPEAPAHS ENPTSKGIHQ DHQLGAEAGA LSCGMNPQLS 1500 1501 QDPSQHQQVS NPPTHISEDV KPKSLPLDRN MSHQIESPTE RRKKSPRGSF QAGSFSPCSP 1560 1561 TPPGQSPSRS ISGKKLCSSC GLALGKGAAM IIETLNLYFH IQCFRCGICK GQLGDAMSGT 1620 1621 DVRIRNSLLN CNDCYLRSRS AGQPTTL 1647 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCTTGTC CCGCGCTCGG TCTGGAAGCT CTTCAGCCCC TGCAGCCCGA GCCGCCCCCC 60 61 GAGCCCGCCT TCTCCGAGGC GCAGAAGTGG ATCGAGCAAG TAACTGGCAG AAGTTTTGGT 120 121 GACAAAGATT TTCGGACTGG ATTAGAAAAT GGAATCCTTC TCTGCGAGTT GCTGAATGCT 180 181 ATAAAGCCAG GACTTGTTAA AAAGATCAAT AGATTGCCTA CCCCCATTGC AGGATTGGAC 240 241 AATATTATCT TATTCTTGAG AGGTTGTAAA GAGCTCGGCC TCAAAGAATC TCAACTGTTT 300 301 GACCCGAGTG ACCTCCAGGA TACGTCCAAC AGAGTAACGG TCAAGAGCCT CGATTATAGT 360 361 CGGAAGCTGA GAAATGTACT AGTGACCATT TATTGGCTGG GAAAGGCTGC AAATAGCTAT 420 421 GCATCCTACA GCGGAACGAC TCTGAACCTG AAGGAGTTTG AAGGCTTGTG GGCTCAGATG 480 481 AGAAAGGAGA CTGATGACAT TGAGAGTCCT AAGCGCAGCA TCCGAGACAG TGGTTACATC 540 541 GACTGCTGGG ATTCGGAGCG CAGCGACTCC CTCTCTCCTC CTCGGCACGG TCGCGATGAC 600 601 TCCTTCGACA GCCTCGATTC CTTCGGCTCC CGTTCCAGGC AGACACCTTC GCCAGATGTA 660 661 GTGCTCAGGG GAAGCAGCGA TGGGAGAGGA AGCGACTCTG AGTCCGACTT GCCACATCGG 720 721 AAGCTACCAG ATGTGAAGAA AGATGACATG TCTGCACGAC GGACTTCCCA TGGTGAGCCA 780 781 AAATCAGCAG TGCCTTTTAA CCAGTACCTC CCCAACAAGA GCAATCAGAC GGCCTACGTC 840 841 CCCGCTCCTC TGAGAAAGAA GAAGGCTGAG CGGGAGGAGT ACAGGAAGAG CTGGAGCACT 900 901 GCCACCTCCC CGCTGGGTGG TGAGAGGCCC TTCAGCTATC CTGAAACAAT AGAGGAAGAG 960 961 GGAAGTGACA TGGGGTCTCT GGGTGAAGAG GACCCAATTG GCCAGATGGA CGCAGGTGGA 1020 1021 AATCCTTCTG ATGCCGGGTT AGAATTACCC GACGGCAGTG GTAAGGGGCA GCCTCCTTCA 1080 1081 GAGGGGACTA CGGTGACACC CACGGCCAGG TCAGAAGAAA AAGATGCTGC CGAAGTTCAA 1140 1141 AAGCGCAGAA GGCTAGAGCA AGCAGGAATC AAGGTCATGC CAGCAGCACA GCGCTTTGCC 1200 1201 AGTCAAAAGC AATTGGGAGA AGAGAAGGAC ACCATTTGTG ATATTATCCT TCGCAAAGAG 1260 1261 AACCCTTTCC TGACCCATCA GCATGGCAAA GATTCTGAGT CAGAAGACGA AGTTGCGTGT 1320 1321 CGACTGCCCG ATCTTGTGAA AGATGACTTT GCTGCGAGGA GAGCAAGGAT GAACCAACCC 1380 1381 AAGCCAACGG TGCCACTGAA TCAGCTCCTC TATGGGCCCT ATAGAAAGAA AGAGGCAGAG 1440 1441 ACATCAGATG GCAGCAAACC CGCCAAAGGA AACTCAGAGA AGAAAAGCCT AGAATATAAA 1500 1501 AGAAACCAGG GCAAAGCAGA AGAGCTGAAG TCAGTAGCGA CCTGTATTAC GAGGGCCCAG 1560 1561 GAGAGTGAAC CAGTGGAAGA GGGAGGGAAG AAGGTGCCAG ATCTTTACAA GGACGACCTG 1620 1621 GCCCAGCGGA GAATTCAGGG CTGCCTCGGC CCTCACCGCG AGGCCCCAAG CTTCATCATA 1680 1681 CCCTCCAAGA TAACAGAAGC TGACTTGAAG ACGTGGGAGA GACTGCAAGT GTCAGGAAAG 1740 1741 ACGAGGGACG GAGATTCTCA GCAAATCTGT GCCCCCGAGC CTCTACCAGA AATTAAAGCA 1800 1801 GAAACCGCCA TCCGCGATGA CTTTGCCAGC CGCAAAGCCA GGGCCTATAA GAAAGCTTCC 1860 1861 GGCCCAAGGC AAAAATTTGT GCACTTCGGG CCGGTGACAG AGATAGACCA GCAGAAGTGG 1920 1921 AAGCGGCTCA GCATTGGCAA GGCGGGGCCC CGGGAGGAGG TAGGAGTCGC CGGTCACAGC 1980 1981 AGCAGGCTGC CAGCACACCC TGCATCCCCT GCCTCAGCCG CCGGCCCTGG ACTAAAGGAA 2040 2041 GACCCAGTGC TCACTCGGCA GGATGACTGC AGAATAGTGA ATTCTGGCCT AGATGACTAT 2100 2101 TGCCAAAGGG ACTCGAGGCT GGCTCCTGTG CCGGAGTCTC AGGAAGAGTG GGCCAGCAGT 2160 2161 GTGGGCGAGT GCCCCGGGAA CACGGAGGAA GTTACATCCA AACCGGCGCC ACAGGGTGGC 2220 2221 AAAGAAGAAA ATGAAGGAGT TGCTCCAAGA GCATCTGCGA TGTTGCCCGA GGCAGAATGC 2280 2281 CCGGCGGAGA GCAGCCAGCC CCTTGCCTGT CCTCTGGCCT CTGAGCGGGA GCCGGCAGGG 2340 2341 GCTGAAGAGA AGGCGGAGGA GTCAGCAGCG CCTGCCTGGA GTGCCAGTGG ACCGAAAGGC 2400 2401 CAAGGAAAGC TCTCTGAGTC ACAGAAAGAT GACACAATGG CCAGGACAAC TGGGGAGTCC 2460 2461 CTGAGTCACC CTGGATCCAG CCCAAACCAG TGCCTTCCGG TTCCATTTGC AAAGCAACAG 2520 2521 GAGGTCGAGG AATCCGCTGA GGATCCACCC GTGAAGGATC GGAGATACGG TCCGAGAACT 2580 2581 CCTGTGTCTG ATGACGCAGA GAGCACGAGT TTGTTTGACA TGCGGTGCGA GGAGGAGGCC 2640 2641 GCCGTGCTGC CGCACAGCAG GGCCCGCCAG GAGCAGCTGC AACTGATAAA CAGCCAGCTG 2700 2701 CGGGAAGAGG ACGACAAATG GCAAGACGAC CTGGCTCGTT GGAAGAGTCG TAGGAGAAGT 2760 2761 GCATCACAAG ACTTGATCAA GAAAGAGGAG GAAAGAAAAA AAATGGAGAA GTTACTGGCT 2820 2821 GGAGAGGATG GAACCAGTGA ACGAAGGAAA AGCATCAAGA CCTACAGAGA AATTGTTCAA 2880 2881 GAAAAAGAGC GGAGAGAGAG AGAGCTGCAC GAAGCATATA AGAACGCACG GTCGCAGGAG 2940 2941 GAGGCCGACG GGATCCTGCA GCAGTACATC GAGAGGTTTA CCATCAGCGA GGCTGTTCTT 3000 3001 GAACGCTTGG AGATGCCAAA AATTCTGGAA AGAAGCCATT CAACAGAGCC AAACTTATCC 3060 3061 TCCTTCCTGA GCGACCCCAA CCCCATGAAA TACCTGCGGC AACAGTCACT GCCTCCGCCC 3120 3121 AAGTTCACTG CCACTGTGGA AACCACCATC GCGCGTGCCA GTGCCCCGGA TGCCAGCACG 3180 3181 GCAGCAGGCA GTGGGTCCCC CAGCAAAACT GTGACCCCCA AAGCAGTGCC TATGCTGACA 3240 3241 CCCAAGCCTT ACTCCCAGCC CAAAAACTCT CAAGAGGTTC TCAAGACCTT TAAGGTAGAT 3300 3301 GGGAAAGTCA GCATGAACGG AGAGACAGCC CACGGAGATG AGGAAGAGAA GGGAAGAGAG 3360 3361 TGTCCCACAG TGACACCTGC TGTCTCCTTA ACCACGTCCC AGATGTTTGA AGGTGTGGCC 3420 3421 AGAGTGCACG GGTCACCAGT GGAGCTCAAG CAAGACAACA ACAGCGTTGA GATCAACATA 3480 3481 AAGAAGCCAA ATCCTGTTCC CCAGGAAGCG ACAGCCACCA CGGAGGAAAC AGAACTGAAC 3540 3541 AGCCACGAAG ATGAGAATGA TGGCGGAGAA CCAGGAAGTG AGAATGTAGA CCTTGCCGCA 3600 3601 TCAGAGCCTC AGCACTTTAC ATCCACCGTG ACTCGCTGCA GCCCCACGGT GGCCCTGGTG 3660 3661 GAGCTGCCCT CCAGCCCCTC GCCCGACGAG AGAGGCCAGA AGAGCTCAGA AAATGAAATG 3720 3721 AGCGGGAAGG TGGAGCTGGT GCTGTCTCAG AAGGTGGTAA AGCCAAAGTC CCCAGAACCA 3780 3781 GAAGCTACCC TGACATTTCC ATTTCTGGAC AAAATGCATG AAACCAGCCA ACTACATTTG 3840 3841 CCAAATCTCA ATTCTCAAGA GTTGCCTGGC ACTGCCAGTG TTCCCCTTAG AGTTCAGAAC 3900 3901 TCTTGGCGAC GGTCCCAGTT TTTCTCCCAG TCAGATTCTC CAAGCAATGA AAAGTCACCT 3960 3961 GTAACTACAC CTTTTAAGTT CTGGGCGTGG GACCCCGAAG AGGAGCGCAG ACGACAGGAA 4020 4021 AAATGGCAAC AGGAGCAGGA GCGTTTGCTC CAGGAGAGAT ACCAGAAGGA GCAGGACAAG 4080 4081 CTAAAAGAAG AGTGGGAAAA GGCCCAGAAG GAGGTGGAAG AGGAAGAACG CAGATACTAT 4140 4141 GAGGAGGAGC GTAAGATAAT TGAAGATACT GTGGTCCCGT TTACTATTTC CTCAAGTTCT 4200 4201 GCAGACCAGC TGTCTACATC TTCCTCTGTG ACTGAAGGCA GTGGGACAGT GAAAAAGATG 4260 4261 GACTTGGAAA ACTGTCAAGA AGAAAAAGAA GAGAGAAGAC AGAAGGAACC GTTCCAGGGA 4320 4321 GATGACAATG ACTTATTGCA TAAGACTAGA GGATGTGACC CACTGGAGGA GAAGGGCAGC 4380 4381 AGCCTAATGC CAGAGGCCCC GGCTCATTCT GAGAATCCCA CATCCAAAGG AATCCATCAA 4440 4441 GACCATCAGC TGGGAGCAGA GGCCGGAGCC CTCAGCTGTG GGATGAATCC ACAGCTGTCT 4500 4501 CAGGATCCAT CCCAGCATCA GCAGGTGTCA AACCCACCCA CGCACATTTC AGAAGATGTG 4560 4561 AAGCCAAAAT CCCTGCCACT GGATAGAAAC ATGAGCCATC AGATTGAGTC TCCCACGGAA 4620 4621 AGGCGAAAGA AAAGTCCTCG AGGGAGCTTC CAGGCTGGGT CCTTCTCACC CTGCTCTCCC 4680 4681 ACCCCGCCCG GCCAGTCACC CAGCAGGTCG ATCAGCGGGA AGAAGCTGTG CTCTTCCTGT 4740 4741 GGGCTGGCCC TGGGGAAAGG AGCTGCGATG ATCATCGAGA CCCTGAATCT GTATTTCCAC 4800 4801 ATCCAGTGTT TCAGGTGTGG AATTTGTAAA GGACAGCTTG GAGATGCCAT GAGCGGGACA 4860 4861 GATGTTAGAA TCCGAAATAG TCTTCTAAAC TGTAACGACT GCTACCTGCG ATCCAGAAGT 4920 4921 GCTGGCCAGC CCACAACCTT GTGA 4944 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Hos-a071 | Homo sapiens | 0.0 | 2260 | undefined |
LLPS-Mum-a073 | Mus musculus | 0.0 | 1106 | undefined |