LLPS-Orc-0032
DDX50
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Uncharacterized protein |
Gene Name: | DDX50 |
Ensembl Gene: | ENSOCUG00000002879.2 |
Ensembl Protein: | ENSOCUP00000018368.1 |
Organism: | Oryctolagus cuniculus |
Taxa ID: | 9986 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nuclear speckle, Nucleolus, P-body, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSOCUT00000029944.1 | ENSOCUP00000018368.1 |
Ensembl | ENSOCUT00000002879.2 | ENSOCUP00000002502.2 |
UniProt | G1TN01, G1TN01_RABIT | |
GeneBank | AAGW02036935 | |
RefSeq | XM_002718449.3 | XP_002718495.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MPGKLLWGDI MELEAPLEEP DSLRKQRRKS DRRKSRHHYD SDEKSETREN GVADDLDTPK 60 61 PKKAKMREKL NGDTEEGFNR LSDEFSKSRK SRRKDLPNGD IKYEKKSKRV SSLDNAHKSS 120 121 DNKLEETLTR EQKEGSFSNF SISEETVKLL KGRGVTYLFP IQVKTFGPIY EGKDLIAQAR 180 181 TGTGKTFSFA IPLIERLQRN QETVKKSRSP KVLVLAPTRE LANQVAKDFK DITRKLSVAC 240 241 FYGGTSYQSQ INHIRNGIDI LVGTPGRIKD HLQSGRLDLS KLRHVVLDEV DQMLDLGFAE 300 301 QVEDIIHESY KTDSEDNPQT LLFSATCPQW VYKVAKKYMK SRYEQVDLVG KMTQKAATTV 360 361 EHLAIQCHWS QRPAVIGDVL QVYSGSEGRA IIFCETKKNV TEMAMNPHIK QNAQCLHGDI 420 421 AQSQREITLK GFREGSFKVL VATNVAARGL DIPEVDLVIQ SSPPQDVESY IHRSGRTGRA 480 481 GRTGICICFY QPRERGQLRY VEQKAGITFK RVGVPSTMDL VKSKSMDAIR SLASVSYAAV 540 541 DFFRPSAQRL IEEKGAVDAL AAALAHISGA SSFEPRSLIT SDKGFVTMTL ESPEEIQDVS 600 601 SAWKELNRKL SSNAVSQVTR MCLLKGNMGV CFDVPTIESE SLQAEWHDSD WILSVPAKLP 660 661 EIEEYYDGNT SSNSRQRSGW SSGRSGRSGG RSGGRSGGRS GRQGRQGSRS GSRQDGRRRG 720 721 GRNRSRSGGH KRNFD 735 |
Nucleotide CDS Sequence (FASTA) |
1 ATGCCTGGGA AACTCCTGTG GGGGGACATT ATGGAGCTGG AAGCACCTTT GGAGGAGCCC 60 61 GACAGCCTGA GGAAGCAGAG GCGAAAGAGT GACAGAAGGA AGTCAAGGCA CCATTATGAC 120 121 TCAGATGAGA AATCAGAAAC AAGGGAAAAT GGTGTTGCAG ATGACTTGGA TACTCCCAAG 180 181 CCCAAAAAAG CTAAAATGAG AGAGAAGCTA AATGGAGACA CTGAAGAAGG ATTTAATAGA 240 241 CTTTCAGATG AATTTTCTAA ATCACGTAAG TCAAGAAGAA AAGATCTGCC AAATGGAGAT 300 301 ATTAAATATG AAAAAAAATC GAAGCGAGTA TCCTCCTTGG ACAATGCTCA TAAATCAAGT 360 361 GATAATAAAC TAGAGGAGAC CCTAACACGT GAACAGAAAG AAGGATCTTT CTCCAATTTC 420 421 TCAATTTCTG AAGAGACTGT AAAGCTTCTG AAAGGTCGAG GGGTAACGTA TCTCTTTCCT 480 481 ATTCAAGTTA AGACCTTTGG CCCCATATAT GAAGGAAAAG ATTTAATTGC TCAAGCACGA 540 541 ACAGGAACAG GGAAGACATT CTCTTTTGCC ATCCCCTTGA TTGAAAGGCT CCAAAGAAAT 600 601 CAAGAAACGG TTAAAAAAAG CCGCTCACCA AAGGTACTTG TTTTGGCTCC AACAAGGGAA 660 661 CTGGCAAACC AAGTAGCCAA AGACTTCAAA GATATAACTA GGAAACTCAG TGTGGCATGT 720 721 TTTTATGGTG GAACATCATA TCAAAGCCAG ATTAATCATA TTCGAAATGG TATTGACATC 780 781 TTGGTTGGGA CACCTGGTCG AATCAAAGAC CATCTGCAGA GCGGCCGGTT GGATCTTTCC 840 841 AAACTACGCC ACGTTGTGCT TGATGAAGTG GATCAAATGT TAGATTTAGG TTTTGCTGAA 900 901 CAAGTTGAAG ATATTATCCA TGAATCCTAC AAAACTGATT CTGAAGACAA TCCTCAGACT 960 961 TTACTTTTTT CTGCAACTTG CCCACAGTGG GTGTACAAAG TTGCAAAAAA ATACATGAAA 1020 1021 TCCAGATATG AGCAGGTTGA CCTTGTTGGA AAAATGACTC AAAAGGCTGC AACTACTGTG 1080 1081 GAACATCTGG CCATCCAGTG CCATTGGTCT CAGAGGCCAG CAGTCATTGG AGATGTCCTT 1140 1141 CAGGTGTACA GTGGGTCTGA AGGGAGAGCT ATTATTTTCT GTGAGACCAA AAAGAATGTA 1200 1201 ACTGAAATGG CCATGAATCC GCACATAAAA CAGAATGCCC AGTGTTTACA TGGGGACATT 1260 1261 GCACAGTCAC AGAGAGAAAT TACTCTGAAA GGCTTCAGAG AAGGTAGTTT TAAAGTTCTG 1320 1321 GTGGCAACCA ATGTGGCTGC CCGTGGTTTG GACATTCCTG AGGTTGACCT CGTGATTCAA 1380 1381 AGTTCTCCTC CACAGGATGT TGAGTCCTAT ATCCATCGCT CTGGACGCAC AGGTAGAGCT 1440 1441 GGCCGGACAG GGATTTGCAT ATGTTTTTAT CAACCAAGAG AAAGAGGTCA ACTAAGATAT 1500 1501 GTGGAACAAA AAGCAGGAAT TACTTTTAAA CGTGTAGGTG TTCCTTCTAC AATGGATTTA 1560 1561 GTTAAATCTA AAAGCATGGA TGCCATCAGG TCTCTGGCTT CTGTCTCTTA TGCTGCTGTG 1620 1621 GATTTTTTCC GACCATCAGC CCAGAGACTG ATAGAAGAGA AAGGGGCAGT GGATGCACTG 1680 1681 GCTGCAGCAT TAGCCCACAT TTCTGGTGCA TCAAGCTTTG AACCACGATC TTTGATCACT 1740 1741 TCTGATAAGG GGTTTGTGAC CATGACTCTG GAAAGCCCTG AAGAAATACA GGATGTCAGC 1800 1801 TCTGCGTGGA AAGAGCTTAA CAGAAAGCTG AGTAGCAATG CTGTGTCCCA AGTTACCAGA 1860 1861 ATGTGCCTCC TGAAAGGAAA TATGGGTGTT TGCTTTGATG TTCCTACAAT CGAGTCAGAA 1920 1921 AGTTTACAGG CAGAGTGGCA TGATTCAGAC TGGATCCTCT CAGTACCAGC CAAATTACCT 1980 1981 GAAATTGAAG AATATTATGA TGGAAACACA TCCTCTAATT CGAGACAGAG GAGTAGACAG 2040 2041 GGTCGACAGG GGAGTCGGTC AGGAAGTCGA CAAGATGGCC GAAGACGAGG TGGGAGAAAT 2100 2101 CGATCAAGAA GTGGGGGCCA CAAACGGAAT TTTGACTGA 2139 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Poa-0986 | Pongo abelii | 97.2 | 0.0 | 1174 |
LLPS-Cea-1223 | Cercocebus atys | 96.7 | 0.0 | 1209 |
LLPS-Gog-0356 | Gorilla gorilla | 95.98 | 0.0 | 1248 |
LLPS-Caj-1455 | Callithrix jacchus | 95.98 | 0.0 | 1248 |
LLPS-Maf-0960 | Macaca fascicularis | 95.98 | 0.0 | 1248 |
LLPS-Chs-2174 | Chlorocebus sabaeus | 95.98 | 0.0 | 1248 |
LLPS-Hos-2605 | Homo sapiens | 95.98 | 0.0 | 1248 |
LLPS-Nol-0260 | Nomascus leucogenys | 95.98 | 0.0 | 1248 |
LLPS-Mam-1398 | Macaca mulatta | 95.98 | 0.0 | 1248 |
LLPS-Fec-2060 | Felis catus | 95.84 | 0.0 | 1234 |
LLPS-Pat-0153 | Pan troglodytes | 95.83 | 0.0 | 1247 |
LLPS-Pap-0877 | Pan paniscus | 95.83 | 0.0 | 1247 |
LLPS-Eqc-1519 | Equus caballus | 95.83 | 0.0 | 1239 |
LLPS-Otg-0893 | Otolemur garnettii | 95.54 | 0.0 | 1235 |
LLPS-Urm-0845 | Ursus maritimus | 95.54 | 0.0 | 1229 |
LLPS-Loa-0569 | Loxodonta africana | 95.54 | 0.0 | 1239 |
LLPS-Cas-1798 | Carlito syrichta | 95.54 | 0.0 | 1236 |
LLPS-Caf-2530 | Canis familiaris | 95.54 | 0.0 | 1232 |
LLPS-Cap-0597 | Cavia porcellus | 95.23 | 0.0 | 1210 |
LLPS-Mup-2292 | Mustela putorius furo | 95.21 | 0.0 | 1159 |
LLPS-Aim-2215 | Ailuropoda melanoleuca | 95.1 | 0.0 | 1222 |
LLPS-Ova-2041 | Ovis aries | 95.09 | 0.0 | 1227 |
LLPS-Bot-0231 | Bos taurus | 95.09 | 0.0 | 1229 |
LLPS-Sus-1570 | Sus scrofa | 94.79 | 0.0 | 1224 |
LLPS-Dio-1592 | Dipodomys ordii | 94.79 | 0.0 | 1236 |
LLPS-Mum-0674 | Mus musculus | 94.49 | 0.0 | 1205 |
LLPS-Mal-3259 | Mandrillus leucophaeus | 94.35 | 0.0 | 1209 |
LLPS-Ran-0445 | Rattus norvegicus | 93.89 | 0.0 | 1199 |
LLPS-Ict-1095 | Ictidomys tridecemlineatus | 93.61 | 0.0 | 1201 |
LLPS-Myl-0466 | Myotis lucifugus | 93.45 | 0.0 | 1204 |
LLPS-Mea-1128 | Mesocricetus auratus | 92.49 | 0.0 | 765 |
LLPS-Rhb-2225 | Rhinopithecus bieti | 89.04 | 0.0 | 996 |
LLPS-Man-0205 | Macaca nemestrina | 88.99 | 0.0 | 1140 |
LLPS-Paa-3670 | Papio anubis | 88.39 | 0.0 | 1106 |
LLPS-Fud-2075 | Fukomys damarensis | 88.24 | 0.0 | 1123 |
LLPS-Sah-0480 | Sarcophilus harrisii | 81.1 | 0.0 | 1003 |
LLPS-Mod-2807 | Monodelphis domestica | 79.79 | 0.0 | 1026 |
LLPS-Aon-2205 | Aotus nancymaae | 76.64 | 0.0 | 942 |
LLPS-Tag-1888 | Taeniopygia guttata | 72.68 | 0.0 | 785 |
LLPS-Fia-1054 | Ficedula albicollis | 72.27 | 0.0 | 781 |
LLPS-Anp-0510 | Anas platyrhynchos | 71.03 | 3e-116 | 358 |
LLPS-Anc-0387 | Anolis carolinensis | 70.07 | 0.0 | 771 |
LLPS-Lac-1617 | Latimeria chalumnae | 69.89 | 0.0 | 744 |
LLPS-Ora-0380 | Ornithorhynchus anatinus | 69.54 | 0.0 | 812 |
LLPS-Ten-2908 | Tetraodon nigroviridis | 68.59 | 0.0 | 729 |
LLPS-Asm-2276 | Astyanax mexicanus | 68.58 | 0.0 | 749 |
LLPS-Gaa-3182 | Gasterosteus aculeatus | 68.22 | 0.0 | 723 |
LLPS-Icp-1659 | Ictalurus punctatus | 68.16 | 0.0 | 739 |
LLPS-Orn-2467 | Oreochromis niloticus | 67.41 | 0.0 | 727 |
LLPS-Tar-1408 | Takifugu rubripes | 67.4 | 0.0 | 734 |
LLPS-Meg-0825 | Meleagris gallopavo | 67.22 | 0.0 | 798 |
LLPS-Leo-2143 | Lepisosteus oculatus | 66.85 | 0.0 | 716 |
LLPS-Pof-2237 | Poecilia formosa | 66.73 | 0.0 | 723 |
LLPS-Scm-1240 | Scophthalmus maximus | 66.73 | 0.0 | 721 |
LLPS-Scf-0988 | Scleropages formosus | 66.67 | 0.0 | 719 |
LLPS-Orl-3416 | Oryzias latipes | 66.24 | 0.0 | 714 |
LLPS-Gaga-2765 | Gallus gallus | 66.23 | 0.0 | 753 |
LLPS-Dar-1986 | Danio rerio | 66.02 | 0.0 | 736 |
LLPS-Xim-3195 | Xiphophorus maculatus | 65.2 | 0.0 | 725 |
LLPS-Tut-0073 | Tursiops truncatus | 63.96 | 0.0 | 731 |
LLPS-Cii-1129 | Ciona intestinalis | 51.85 | 7e-170 | 511 |
LLPS-Xet-0550 | Xenopus tropicalis | 51.22 | 2e-178 | 536 |
LLPS-Cis-0658 | Ciona savignyi | 50.55 | 7e-130 | 402 |
LLPS-Sot-1720 | Solanum tuberosum | 45.58 | 7e-88 | 292 |
LLPS-Hov-1831 | Hordeum vulgare | 45.07 | 3e-87 | 294 |
LLPS-Viv-2181 | Vitis vinifera | 44.21 | 2e-105 | 346 |
LLPS-Ori-1249 | Oryza indica | 44.09 | 2e-86 | 291 |
LLPS-Org-1230 | Oryza glaberrima | 44.09 | 2e-86 | 291 |
LLPS-Gor-2081 | Gossypium raimondii | 43.98 | 1e-117 | 376 |
LLPS-Orbr-1325 | Oryza brachyantha | 43.97 | 6e-79 | 268 |
LLPS-Sem-0184 | Selaginella moellendorffii | 43.93 | 3e-121 | 384 |
LLPS-Met-0342 | Medicago truncatula | 43.87 | 2e-122 | 389 |
LLPS-Brd-2241 | Brachypodium distachyon | 43.82 | 4e-87 | 293 |
LLPS-Orp-2037 | Oryza punctata | 43.82 | 4e-85 | 288 |
LLPS-Orm-0486 | Oryza meridionalis | 43.82 | 8e-84 | 288 |
LLPS-Gas-1217 | Galdieria sulphuraria | 43.76 | 1e-90 | 306 |
LLPS-Lep-1058 | Leersia perrieri | 43.7 | 2e-85 | 288 |
LLPS-Sei-1079 | Setaria italica | 43.55 | 3e-84 | 284 |
LLPS-Ors-2375 | Oryza sativa | 43.55 | 3e-86 | 291 |
LLPS-Sob-0163 | Sorghum bicolor | 43.48 | 1e-82 | 281 |
LLPS-Amt-1389 | Amborella trichopoda | 43.47 | 3e-85 | 288 |
LLPS-Coc-1483 | Corchorus capsularis | 43.32 | 1e-114 | 385 |
LLPS-Dac-0247 | Daucus carota | 43.31 | 9e-126 | 397 |
LLPS-Glm-0592 | Glycine max | 43.31 | 1e-122 | 389 |
LLPS-Vir-0393 | Vigna radiata | 43.31 | 9e-115 | 368 |
LLPS-Tru-0326 | Triticum urartu | 43.28 | 4e-84 | 285 |
LLPS-Thc-0859 | Theobroma cacao | 43.23 | 8e-114 | 376 |
LLPS-Art-0737 | Arabidopsis thaliana | 43.2 | 3e-112 | 362 |
LLPS-Mua-0056 | Musa acuminata | 43.12 | 1e-123 | 389 |
LLPS-Mae-1424 | Manihot esculenta | 43.12 | 6e-120 | 382 |
LLPS-Hea-1298 | Helianthus annuus | 43.09 | 2e-87 | 295 |
LLPS-Pot-0638 | Populus trichocarpa | 42.75 | 1e-119 | 381 |
LLPS-Zem-2320 | Zea mays | 42.52 | 4e-84 | 285 |
LLPS-Tra-1381 | Triticum aestivum | 42.47 | 2e-82 | 281 |
LLPS-Orni-0801 | Oryza nivara | 42.31 | 4e-84 | 285 |
LLPS-Orb-0897 | Oryza barthii | 42.31 | 3e-84 | 286 |
LLPS-Orgl-0711 | Oryza glumaepatula | 42.31 | 1e-84 | 286 |
LLPS-Bro-1973 | Brassica oleracea | 42.3 | 1e-111 | 360 |
LLPS-Brn-0945 | Brassica napus | 42.25 | 4e-85 | 286 |
LLPS-Brr-1873 | Brassica rapa | 42.25 | 7e-85 | 287 |
LLPS-Orr-1564 | Oryza rufipogon | 42.24 | 1e-81 | 285 |
LLPS-Phv-0079 | Phaseolus vulgaris | 42.01 | 9e-115 | 369 |
LLPS-Arl-1466 | Arabidopsis lyrata | 41.93 | 3e-116 | 372 |
LLPS-Via-0361 | Vigna angularis | 41.82 | 7e-115 | 370 |
LLPS-Prp-0956 | Prunus persica | 41.82 | 2e-113 | 365 |
LLPS-Sol-2178 | Solanum lycopersicum | 41.71 | 3e-108 | 351 |
LLPS-Nia-1243 | Nicotiana attenuata | 41.53 | 2e-109 | 354 |
LLPS-Cus-0581 | Cucumis sativus | 41.26 | 5e-118 | 377 |
LLPS-Php-0513 | Physcomitrella patens | 41.13 | 3e-129 | 407 |
LLPS-Cym-0956 | Cyanidioschyzon merolae | 41.1 | 7e-100 | 331 |
LLPS-Osl-1031 | Ostreococcus lucimarinus | 41.04 | 2e-112 | 362 |
LLPS-Chc-0671 | Chondrus crispus | 40.07 | 7e-120 | 384 |
LLPS-Chr-0747 | Chlamydomonas reinhardtii | 39.74 | 7e-115 | 370 |
LLPS-Abg-0486 | Absidia glauca | 38.83 | 2e-127 | 400 |