LLPS-Nia-2609
RPL1_1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | 50s ribosomal protein l1, chloroplastic |
| Gene Name: | RPL1_1, A4A49_34556 |
| Ensembl Gene: | A4A49_34556 |
| Ensembl Protein: | OIS99060 |
| Organism: | Nicotiana attenuata |
| Taxa ID: | 49451 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | OIS99060 | OIS99060 |
| UniProt | A0A1J6I1X2, A0A1J6I1X2_NICAT | |
| GeneBank | MJEQ01037190 | OIS99060.1 |
| RefSeq | XM_019396164.1 | XP_019251709.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAAFELLHQA RRHCSYKTPS HFSPLLRSHF HRFLSSSSSQ SQPESPENPS LVQPVSYKPK 60 61 DPPETPSTET TSQASPQSQT QNGTRPESNT RESVNADGKT WTREDLRYLK DAPKITPVSY 120 121 PTRVAPLPED RVEEEGGVEA KGDEELERER RRIEAQKRAA MRRVLNVEEE MVPFPTLVNV 180 181 KSDDEKKKKK AVYDLKEAIR LVKANAKKKF DETLEAHVVL TSDMRRSDLK LEGTVAVPHG 240 241 FGKVYRIAVF AEGAAADEAR EAGADVVGGL ELIENIKSGN VKIDFDKCFS THAMMPNLRQ 300 301 IAKYLRQLMP DTKKGTVTKD ITKAVKEAKQ GVPFKKDKTA IVHVGIGKVS FQDEALCENV 360 361 GAFVHELLRQ KPAGLKKSSK YAGYVNTVHI CSTMGPSFPV SIQSLSIAAD RHARKYLQL 419 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGGCCT TCGAACTGCT CCATCAAGCT CGCCGCCACT GCTCCTACAA AACTCCATCT 60 61 CACTTTTCTC CTCTTCTTCG CTCTCATTTC CACCGATTTC TCTCCTCTTC ATCATCTCAA 120 121 TCACAACCCG AATCCCCAGA AAACCCGAGT CTAGTCCAAC CCGTTTCTTA CAAACCCAAG 180 181 GATCCTCCGG AAACCCCATC TACAGAAACC ACATCGCAAG CTTCCCCACA ATCACAAACA 240 241 CAAAATGGTA CCCGACCCGA ATCAAATACT CGAGAATCAG TTAATGCGGA TGGTAAAACT 300 301 TGGACACGGG AGGATCTCCG ATACTTAAAG GATGCACCAA AAATAACTCC GGTTTCTTAC 360 361 CCGACCCGAG TAGCTCCGTT ACCTGAGGAT CGGGTTGAAG AGGAGGGGGG AGTGGAAGCT 420 421 AAGGGTGATG AGGAGCTGGA GAGAGAGAGG AGAAGAATTG AGGCGCAAAA AAGGGCGGCA 480 481 ATGAGGAGAG TTTTGAATGT TGAAGAGGAA ATGGTTCCGT TTCCCACATT GGTTAACGTG 540 541 AAGAGTGATG ATGAAAAGAA GAAGAAAAAG GCTGTTTATG ATCTTAAAGA GGCCATTCGC 600 601 CTCGTAAAGG CTAATGCCAA GAAGAAGTTT GATGAAACTT TGGAAGCTCA TGTTGTTTTG 660 661 ACTTCTGATA TGCGCCGAAG TGACCTGAAG CTTGAAGGTA CAGTAGCTGT TCCTCATGGG 720 721 TTTGGCAAGG TATATCGTAT TGCTGTTTTT GCTGAAGGAG CTGCTGCTGA TGAAGCCCGA 780 781 GAAGCAGGAG CTGATGTTGT TGGTGGTTTG GAGCTCATAG AGAATATCAA GAGTGGAAAT 840 841 GTGAAGATTG ATTTTGACAA ATGTTTTTCC ACTCATGCAA TGATGCCGAA CTTGAGACAG 900 901 ATTGCCAAGT ACTTGAGACA ATTGATGCCA GATACTAAAA AAGGTACTGT TACCAAAGAT 960 961 ATCACAAAGG CAGTGAAAGA AGCAAAGCAA GGTGTACCTT TCAAAAAAGA CAAAACTGCA 1020 1021 ATTGTGCATG TAGGAATTGG GAAGGTAAGT TTTCAAGATG AGGCACTGTG TGAAAACGTT 1080 1081 GGTGCATTTG TACACGAACT TTTGCGTCAG AAGCCTGCTG GCTTAAAAAA GAGCTCAAAA 1140 1141 TATGCTGGTT ATGTGAATAC AGTCCATATA TGCAGTACGA TGGGTCCATC TTTCCCTGTG 1200 1201 TCAATACAGT CATTATCGAT TGCAGCAGAC CGCCATGCAA GGAAGTATCT TCAATTATAG 1260 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Coc-0865 | Corchorus capsularis | 60.07 | 3e-87 | 278 |
| LLPS-Vir-1482 | Vigna radiata | 59.73 | 2e-68 | 228 |
| LLPS-Hea-2662 | Helianthus annuus | 56.79 | 6e-99 | 308 |
| LLPS-Pot-1281 | Populus trichocarpa | 56.4 | 2e-85 | 273 |
| LLPS-Orp-1132 | Oryza punctata | 55.76 | 6e-82 | 264 |
| LLPS-Gor-2601 | Gossypium raimondii | 55.75 | 7e-96 | 300 |
| LLPS-Brn-3333 | Brassica napus | 55.59 | 1e-81 | 263 |
| LLPS-Bro-0706 | Brassica oleracea | 55.59 | 5e-81 | 261 |
| LLPS-Mua-2266 | Musa acuminata | 55.05 | 2e-86 | 276 |
| LLPS-Sei-0647 | Setaria italica | 54.8 | 8e-82 | 264 |
| LLPS-Thc-1039 | Theobroma cacao | 54.79 | 3e-95 | 299 |
| LLPS-Cus-2397 | Cucumis sativus | 54.46 | 2e-82 | 266 |
| LLPS-Orgl-2034 | Oryza glumaepatula | 54.41 | 7e-82 | 264 |
| LLPS-Orni-0530 | Oryza nivara | 54.41 | 1e-81 | 264 |
| LLPS-Ori-1445 | Oryza indica | 54.41 | 1e-81 | 264 |
| LLPS-Orb-1282 | Oryza barthii | 54.41 | 5e-81 | 264 |
| LLPS-Orm-0402 | Oryza meridionalis | 54.41 | 1e-81 | 264 |
| LLPS-Orr-0838 | Oryza rufipogon | 54.35 | 2e-78 | 252 |
| LLPS-Amt-1685 | Amborella trichopoda | 54.02 | 1e-95 | 302 |
| LLPS-Php-0003 | Physcomitrella patens | 53.85 | 4e-58 | 200 |
| LLPS-Phv-0723 | Phaseolus vulgaris | 53.25 | 7e-85 | 272 |
| LLPS-Sob-2068 | Sorghum bicolor | 53.25 | 9e-81 | 261 |
| LLPS-Glm-2646 | Glycine max | 53.07 | 7e-84 | 269 |
| LLPS-Brd-2390 | Brachypodium distachyon | 52.81 | 2e-76 | 250 |
| LLPS-Lep-2175 | Leersia perrieri | 52.66 | 1e-79 | 258 |
| LLPS-Zem-0757 | Zea mays | 52.58 | 1e-80 | 261 |
| LLPS-Brr-0778 | Brassica rapa | 52.42 | 1e-79 | 258 |
| LLPS-Arl-2264 | Arabidopsis lyrata | 52.11 | 4e-86 | 275 |
| LLPS-Art-0042 | Arabidopsis thaliana | 51.72 | 7e-85 | 272 |
| LLPS-Viv-0082 | Vitis vinifera | 50.23 | 5e-97 | 304 |
| LLPS-Via-2074 | Vigna angularis | 50.0 | 4e-80 | 259 |
| LLPS-Met-2557 | Medicago truncatula | 49.05 | 6e-91 | 287 |
| LLPS-Tra-0451 | Triticum aestivum | 47.35 | 5e-80 | 259 |
| LLPS-Mae-2014 | Manihot esculenta | 46.95 | 3e-87 | 278 |
| LLPS-Prp-2433 | Prunus persica | 45.64 | 1e-86 | 277 |
| LLPS-Sem-1954 | Selaginella moellendorffii | 44.55 | 1e-32 | 131 |
| LLPS-Kop-0499 | Komagataella pastoris | 44.21 | 8e-18 | 87.0 |
| LLPS-Sol-0979 | Solanum lycopersicum | 42.18 | 2e-31 | 127 |
| LLPS-Chr-0979 | Chlamydomonas reinhardtii | 39.02 | 6e-15 | 80.1 |
| LLPS-Abg-1731 | Absidia glauca | 38.16 | 3e-24 | 104 |
| LLPS-Asg-0584 | Ashbya gossypii | 35.0 | 3e-13 | 73.6 |
| LLPS-Chc-0993 | Chondrus crispus | 34.93 | 1e-18 | 90.1 |
| LLPS-Scj-1535 | Schizosaccharomyces japonicus | 34.71 | 4e-06 | 52.0 |
| LLPS-Miv-1106 | Microbotryum violaceum | 32.62 | 6e-11 | 67.0 |
| LLPS-Scp-1357 | Schizosaccharomyces pombe | 31.79 | 4e-09 | 60.8 |
| LLPS-Scs-1101 | Sclerotinia sclerotiorum | 30.43 | 2e-07 | 56.2 |
| LLPS-Asn-1624 | Aspergillus nidulans | 29.63 | 1e-07 | 57.4 |
| LLPS-Yal-1394 | Yarrowia lipolytica | 29.56 | 2e-10 | 65.5 |