LLPS-Nia-2509
NUP1_1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Nuclear pore complex protein nup1 |
| Gene Name: | NUP1_1, A4A49_12710 |
| Ensembl Gene: | A4A49_12710 |
| Ensembl Protein: | OIT03264 |
| Organism: | Nicotiana attenuata |
| Taxa ID: | 49451 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | OIT03264 | OIT03264 |
| UniProt | A0A1J6IRR1, A0A1J6IRR1_NICAT | |
| GeneBank | MJEQ01037187 | OIT03264.1 |
| RefSeq | XM_019390017.1 | XP_019245562.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAAAGSGGTA TSSAYGGAGG GAGGKFRKRP FLKNQNTPYD RPPTALRNPS WLTKLVVDPA 60 61 TKLITSGAQR FFSSLFRKRL LPPPTPLPLP PPEARQEPED LQQESCPNDH AGAVVVTGHE 120 121 ICNSVCSSEG SAFSELEQLL KQKTFTRAEI DRLTELLHSK TVDTSVGNDK RAESIQYRPL 180 181 ANNSSSLLEK NRDEKVTSDA AVGTPATSSR VPKGDVASPA ELAKVYMDTM PSKMSSSILS 240 241 SQSQVVRVDT PLLKNIAYSQ NLPITSVRTK TAGLVGVRAN GFTTPRSRGR SAIYNMARAP 300 301 YSRIRQTDGQ MASSSTYNAY SRPSLSESVL EHDGYFGSKQ PLKRSSSVLE DDLGSVGPMR 360 361 RTRQKPNLLS NGVSRPSPGA GVASSSVVYQ EVSKVVGDNN VPTRYAHIPS KSSETAAKIL 420 421 DHLEYLTPKE KSSESKQVAG KDKTPKKLTR NMLHGQALKS LESLDSPKLL HSAQDNSHKL 480 481 ENLSKAFPND AHDSSLQKQG KIEQNGQRRS ISESTVLRKN DAKCSLEDAQ HAQLVLENAD 540 541 SLDKTSAAQP QKKQAFRMSA HEDFFELDED INFDESASQV AEGRDKMGTS DAEKKSLSTD 600 601 GALNKPAAFI ETKATLGILN KRNDMEAPDA AVISVNNTSF LPSANSLSPE VVPPSFGSNK 660 661 LKEPSVDKVP AVLFSSSPPL TGLGPESSSS LCNPPFGLAS GPLELFESDN SQKHGKSNGK 720 721 LEALSSGLSP STSFAAPSST SSSSNGQFAP SPAISATSLL ASSNVPKDVQ SGSSREGAPS 780 781 TSISTAVGST AGNSITSGSC LFSSAAASSV STEPPIKFGL SEGPPTVSTL STTSSADNTD 840 841 LKTKATNFGN LSSTSPFVGS SFASTSPGNN ILGFSSPGMS TDNTANIQSQ SSVFSTGGQS 900 901 LVSARTSLAG SDNARVSQTV PSHFLSSTSS PEVRNSGMTS FSSVGSASSN TGIVSAASSD 960 961 GNPAGSSTAA SGKFSIVASS PASSTLGNSV GPSSGTTQLA FTFGASPAVS AAVTTALATS 1020 1021 SNATSGVFMF GVNSSSSSTN AADTSTRSSP GTFNFGGSSS ASLLSNVSTS NGATPGVFSF 1080 1081 GGGSSASSTN TVSTSTGATP GVFSFGGSSS ASSNSVSTST GATPGVFSFG GSSSASSANS 1140 1141 VSTSTGATPG VFSFGGSSSA SSANTVSTST GATPGVFSFG GSSSASSTNA VSTSTSATTG 1200 1201 IFGFGGSSSA SLTDVIKASI TASPGVFSFG GSSSVPSTNA VNASSTVSPN PFAFGATSAS 1260 1261 SQTSSSAGIF GSSLQPPKLQ PGFSFSSSTS SGFTFGASSS FNAPSTTAVV FGSAPSTPSA 1320 1321 PAFPFGSTSP TVSSSQPIFG NSTPFTAAPV NNGQMSMEDS MAEDPAQASP PAISFGQPSV 1380 1381 SPSPGGFMFG STPSPFQFGG QQSNAAAQNP SPFAASNSFG AGGSFSLGSS GPDKSGRRIV 1440 1441 KPNRNKNRRK 1450 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGGCGG CTGGCAGCGG CGGAACGGCA ACTTCCTCAG CCTACGGAGG CGCCGGCGGC 60 61 GGAGCAGGAG GAAAGTTCCG GAAACGACCT TTCCTTAAGA ACCAAAATAC TCCGTACGAT 120 121 CGCCCTCCGA CGGCTCTCCG GAACCCTAGT TGGCTCACGA AACTCGTCGT TGATCCCGCC 180 181 ACTAAGCTCA TCACTTCCGG TGCTCAACGG TTCTTTTCGT CGCTCTTTCG GAAACGTCTT 240 241 CTCCCTCCCC CAACGCCGTT ACCACTTCCT CCTCCAGAAG CAAGACAAGA ACCAGAGGAT 300 301 CTGCAGCAGG AGTCTTGTCC TAATGATCAT GCTGGAGCAG TAGTAGTCAC CGGACATGAA 360 361 ATTTGCAACT CTGTGTGCAG CTCTGAGGGC AGTGCATTCT CAGAGCTTGA GCAACTGTTA 420 421 AAACAGAAGA CGTTCACCAG AGCTGAAATT GACCGTTTGA CAGAACTTTT GCATTCCAAA 480 481 ACTGTAGATA CCTCTGTTGG GAATGATAAG AGAGCTGAAT CCATTCAATA TAGGCCTTTA 540 541 GCCAATAATT CTAGCTCTTT ACTTGAAAAA AATAGGGACG AGAAGGTTAC ATCTGATGCA 600 601 GCTGTTGGTA CTCCTGCCAC AAGTTCAAGA GTCCCTAAAG GTGATGTTGC ATCTCCTGCT 660 661 GAACTGGCAA AAGTTTACAT GGATACTATG CCTTCAAAGA TGTCATCATC AATTCTGAGT 720 721 TCGCAAAGTC AAGTTGTGAG AGTAGATACA CCACTGCTAA AGAATATAGC ATATTCCCAA 780 781 AATTTACCTA TTACATCAGT GAGAACAAAG ACTGCTGGTC TTGTTGGGGT TCGAGCAAAT 840 841 GGATTTACCA CTCCAAGATC TCGTGGAAGA TCTGCAATAT ACAACATGGC GCGCGCTCCA 900 901 TACTCCAGAA TTCGTCAAAC TGATGGTCAA ATGGCTAGTA GCTCCACATA CAATGCATAT 960 961 AGCAGGCCTT CTTTATCTGA GTCAGTCTTG GAGCATGATG GATATTTTGG CTCTAAACAG 1020 1021 CCACTCAAAC GGAGTAGTTC TGTTCTAGAA GATGATCTGG GATCTGTTGG CCCCATGCGG 1080 1081 AGGACTCGAC AGAAACCCAA TCTCCTATCA AATGGAGTTT CTCGTCCTAG TCCAGGAGCA 1140 1141 GGGGTTGCTT CTTCTTCTGT CGTTTATCAG GAGGTCTCGA AAGTTGTTGG AGATAACAAT 1200 1201 GTGCCGACAA GGTATGCCCA CATTCCTTCC AAGTCCAGTG AGACAGCTGC GAAGATATTG 1260 1261 GATCATCTTG AATATCTGAC CCCAAAGGAG AAGTCATCAG AATCAAAACA AGTTGCAGGG 1320 1321 AAAGATAAAA CACCCAAGAA ATTGACACGG AACATGCTTC ATGGACAAGC TCTTAAAAGC 1380 1381 TTGGAGTCTT TGGATTCGCC AAAGCTGCTT CATAGTGCAC AAGACAACAG CCATAAGCTG 1440 1441 GAAAATTTGT CTAAGGCTTT TCCAAATGAT GCCCATGATT CTAGTTTGCA GAAGCAAGGC 1500 1501 AAAATAGAAC AAAATGGGCA AAGGAGATCT ATTAGCGAGT CCACCGTTTT ACGAAAGAAT 1560 1561 GATGCAAAAT GTTCACTTGA AGATGCTCAA CATGCTCAAC TAGTTTTGGA AAATGCTGAT 1620 1621 TCCCTGGACA AAACTTCTGC AGCTCAGCCT CAAAAAAAGC AAGCTTTTAG GATGAGCGCA 1680 1681 CATGAGGACT TTTTTGAGCT GGATGAGGAC ATAAACTTTG ATGAGTCTGC ATCTCAAGTG 1740 1741 GCTGAAGGGA GAGATAAGAT GGGTACATCT GATGCTGAAA AGAAGTCTCT ATCTACTGAT 1800 1801 GGAGCCCTGA ACAAACCTGC AGCTTTTATT GAAACGAAGG CTACTCTGGG GATTTTGAAC 1860 1861 AAAAGAAATG ATATGGAGGC TCCTGATGCT GCTGTTATCA GCGTCAATAA CACCAGTTTC 1920 1921 CTGCCCAGTG CCAATTCCCT GTCACCCGAG GTTGTCCCGC CATCATTTGG GTCTAACAAA 1980 1981 TTAAAAGAGC CAAGTGTTGA TAAGGTCCCA GCAGTTCTAT TTTCATCATC ACCCCCACTC 2040 2041 ACAGGGTTAG GGCCAGAAAG CTCGAGCAGC TTATGCAACC CTCCTTTTGG CCTGGCTAGT 2100 2101 GGTCCGTTGG AACTCTTTGA GTCAGATAAC TCACAGAAGC ATGGAAAGAG CAATGGAAAG 2160 2161 TTAGAAGCTT TATCATCTGG TCTATCACCT TCAACTTCAT TTGCTGCTCC ATCAAGTACT 2220 2221 TCTAGCTCCA GTAATGGACA GTTTGCACCT AGTCCTGCTA TCTCAGCCAC CTCCCTCTTG 2280 2281 GCATCAAGCA ATGTCCCAAA GGATGTTCAA TCTGGTAGCT CACGCGAGGG TGCCCCTTCC 2340 2341 ACAAGCATTT CAACTGCTGT TGGCAGCACA GCAGGCAACT CCATTACCTC AGGTAGCTGC 2400 2401 CTGTTTAGTT CCGCTGCAGC ATCTTCAGTA TCAACCGAAC CTCCTATCAA ATTTGGGCTG 2460 2461 TCTGAAGGTC CACCAACAGT GTCGACGCTA TCAACAACTT CCAGTGCAGA CAATACAGAT 2520 2521 TTGAAAACCA AAGCAACTAA TTTTGGCAAC TTGAGTAGCA CTTCACCTTT TGTGGGCTCA 2580 2581 TCATTTGCAT CTACTAGTCC TGGAAATAAT ATTTTAGGTT TTAGTTCACC AGGAATGTCA 2640 2641 ACAGATAATA CAGCTAATAT CCAGTCTCAG AGTTCTGTTT TCAGCACTGG AGGTCAGTCG 2700 2701 CTTGTTAGTG CTCGAACTTC TCTAGCTGGA TCAGACAATG CCAGAGTCTC ACAGACTGTT 2760 2761 CCTTCTCATT TTTTATCATC TACTTCATCA CCAGAAGTTA GAAACTCTGG AATGACATCT 2820 2821 TTCTCCTCAG TTGGTTCTGC TTCCAGTAAT ACTGGCATAG TTTCTGCTGC TTCTTCAGAT 2880 2881 GGCAACCCAG CTGGCTCCAG CACTGCTGCA TCTGGAAAAT TTAGTATTGT GGCAAGTTCT 2940 2941 CCAGCCTCAT CTACATTGGG CAATTCAGTC GGTCCTAGCA GTGGGACCAC TCAGCTGGCA 3000 3001 TTTACTTTTG GTGCTAGTCC TGCAGTTTCT GCAGCAGTAA CCACTGCACT TGCCACTTCC 3060 3061 AGCAATGCTA CTTCTGGTGT ATTTATGTTT GGTGTTAATT CTTCATCTTC CTCGACAAAC 3120 3121 GCCGCCGACA CATCTACTCG TTCTAGTCCT GGCACATTTA ATTTTGGTGG TAGTTCTTCA 3180 3181 GCTTCCTTAT TGAGCAATGT CAGCACGTCT AATGGCGCTA CTCCTGGCGT ATTTAGTTTT 3240 3241 GGTGGTGGTT CTTCAGCTTC CTCAACAAAT ACTGTCAGCA CCTCCACTGG CGCTACTCCT 3300 3301 GGCGTATTTA GTTTTGGTGG TAGTTCTTCA GCTTCCTCAA ATTCTGTCAG CACCTCCACT 3360 3361 GGTGCTACTC CTGGCGTATT TAGTTTTGGT GGTAGTTCTT CAGCTTCCTC AGCAAATTCT 3420 3421 GTCAGCACCT CCACTGGTGC TACTCCTGGC GTATTTAGTT TTGGTGGTAG TTCTTCAGCT 3480 3481 TCCTCAGCAA ATACTGTCAG CACCTCCACT GGTGCTACTC CTGGCGTATT TAGTTTTGGT 3540 3541 GGTAGTTCTT CAGCTTCCTC AACAAATGCT GTCAGCACCT CCACTAGTGC TACCACAGGC 3600 3601 ATATTTGGTT TTGGTGGTAG TTCTTCAGCT TCCTTAACAG ATGTCATCAA GGCCTCCATT 3660 3661 ACTGCTTCTC CTGGCGTATT TAGTTTCGGT GGTAGCTCTT CAGTTCCATC AACAAATGCC 3720 3721 GTCAATGCTA GCAGCACAGT GAGTCCTAAT CCATTTGCTT TTGGAGCCAC TTCCGCCTCT 3780 3781 TCACAAACTT CCAGTAGTGC TGGAATTTTT GGTTCCAGTT TACAGCCCCC AAAGCTTCAA 3840 3841 CCAGGTTTTA GTTTTAGTTC TAGCACCTCT TCTGGGTTTA CATTTGGAGC ATCTTCGTCT 3900 3901 TTTAATGCTC CAAGCACTAC TGCGGTAGTC TTTGGATCGG CACCCAGTAC CCCTAGTGCA 3960 3961 CCAGCCTTTC CATTTGGTTC AACTTCTCCG ACAGTATCAT CTTCGCAGCC CATATTTGGG 4020 4021 AACTCCACTC CTTTTACTGC GGCCCCCGTG AACAATGGAC AGATGAGCAT GGAAGACAGC 4080 4081 ATGGCTGAGG ATCCTGCACA GGCATCTCCC CCTGCAATTT CATTTGGTCA ACCTTCTGTC 4140 4141 TCGCCCTCTC CAGGTGGTTT CATGTTTGGT TCAACGCCTA GTCCTTTCCA GTTTGGTGGT 4200 4201 CAGCAGAGTA ATGCTGCTGC TCAGAATCCA TCTCCATTTG CAGCATCAAA CAGTTTTGGT 4260 4261 GCTGGAGGGA GTTTCTCATT GGGAAGCAGT GGCCCCGACA AATCAGGTCG AAGGATCGTC 4320 4321 AAACCTAATA GAAATAAGAA TAGAAGGAAG TAA 4353 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Sot-1152 | Solanum tuberosum | 71.23 | 6e-31 | 136 |
| LLPS-Viv-0739 | Vitis vinifera | 57.14 | 1e-12 | 77.4 |
| LLPS-Sol-0599 | Solanum lycopersicum | 56.02 | 8e-25 | 117 |
| LLPS-Phv-2307 | Phaseolus vulgaris | 54.62 | 5e-12 | 75.5 |
| LLPS-Thc-2510 | Theobroma cacao | 53.49 | 6e-10 | 68.6 |
| LLPS-Glm-0709 | Glycine max | 52.8 | 9e-12 | 74.7 |
| LLPS-Via-0390 | Vigna angularis | 52.42 | 2e-11 | 73.2 |
| LLPS-Vir-1651 | Vigna radiata | 51.49 | 4e-10 | 69.3 |
| LLPS-Met-0789 | Medicago truncatula | 51.16 | 2e-10 | 70.1 |
| LLPS-Mua-1126 | Musa acuminata | 50.38 | 2e-12 | 77.0 |
| LLPS-Gor-0632 | Gossypium raimondii | 46.99 | 2e-07 | 60.1 |
| LLPS-Hea-0140 | Helianthus annuus | 46.46 | 1e-06 | 57.4 |
| LLPS-Pot-1045 | Populus trichocarpa | 46.15 | 1e-06 | 57.8 |
| LLPS-Prp-1825 | Prunus persica | 42.86 | 1e-09 | 67.4 |
| LLPS-Lep-1537 | Leersia perrieri | 41.76 | 8e-11 | 71.2 |
| LLPS-Tra-2427 | Triticum aestivum | 41.38 | 7e-07 | 58.5 |
| LLPS-Coc-0096 | Corchorus capsularis | 41.17 | 4e-95 | 340 |
| LLPS-Mae-2513 | Manihot esculenta | 39.46 | 2e-06 | 57.0 |
| LLPS-Brn-1728 | Brassica napus | 36.42 | 1e-63 | 243 |
| LLPS-Bro-2618 | Brassica oleracea | 36.14 | 5e-63 | 241 |
| LLPS-Art-1180 | Arabidopsis thaliana | 35.02 | 3e-71 | 267 |
| LLPS-Cus-1803 | Cucumis sativus | 32.41 | 2e-12 | 76.6 |
| LLPS-Orbr-1665 | Oryza brachyantha | 32.11 | 1e-16 | 90.5 |
| LLPS-Arl-2954 | Arabidopsis lyrata | 31.68 | 1e-74 | 277 |
| LLPS-Orgl-1571 | Oryza glumaepatula | 31.58 | 2e-26 | 122 |
| LLPS-Ori-1942 | Oryza indica | 31.58 | 5e-25 | 117 |
| LLPS-Tru-1656 | Triticum urartu | 31.54 | 8e-13 | 77.4 |
| LLPS-Ors-0789 | Oryza sativa | 30.9 | 1e-17 | 93.6 |
| LLPS-Orni-0541 | Oryza nivara | 29.48 | 2e-06 | 56.6 |
| LLPS-Sob-0444 | Sorghum bicolor | 28.87 | 6e-30 | 134 |
| LLPS-Sei-2344 | Setaria italica | 28.57 | 3e-14 | 82.4 |
| LLPS-Hov-1404 | Hordeum vulgare | 27.51 | 3e-15 | 85.9 |
| LLPS-Zem-1753 | Zea mays | 27.48 | 4e-33 | 144 |
| LLPS-Brd-0216 | Brachypodium distachyon | 26.85 | 1e-16 | 90.9 |