LLPS-Nia-2437
SHH2_0
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Protein sawadee homeodomain-like 2 |
| Gene Name: | SHH2_0, A4A49_33156 |
| Ensembl Gene: | A4A49_33156 |
| Ensembl Protein: | OIS99036 |
| Organism: | Nicotiana attenuata |
| Taxa ID: | 49451 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | OIS99036 | OIS99036 |
| UniProt | A0A1J6I1U8, A0A1J6I1U8_NICAT | |
| GeneBank | MJEQ01037190 | OIS99036.1 |
| RefSeq | XM_019396139.1 | XP_019251684.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MGRPPSNGGP TFRFNATEVA EMEAILQAHN ATMPAREVLV ALAEKFSSSA ERSGKIMVQM 60 61 KQVWNWFQNR RYAIRAKTAK VPGKFSTPSV PQSDPAMVRT PAKLSASSPV PQSDPAAVRI 120 121 MPQASLPIPS PQVTVKSMPQ APQPLPAPSV AVQNVGRSAS DNIQMEFEAK SARDGAWYDV 180 181 ASFLSHRSVE TADPEVLVRF AGFGAEEDEW VNVRKHVRQR SLPCESSECV AVLPGDLILC 240 241 FQEGKEQALY FDAHVLDAQR RRHDVRGCRC RFLVRYDHDQ SEEIVPLRKV CRRPETDYRL 300 301 QQLNAESLKQ QKIGNDITRG NTTKVYPPAE TTQKAQTESR IKPAEPTQKQ PAPEDTTKPV 360 361 PNVAPMQLQK SSTDSLTGNT LVETTTQCME EMTEKPVAGT TEVPDEAPEK SPVEAPAETA 420 421 GKSPAETTLE PPAASTSKPD EAPEEPPTET TLKPPAASTT KPDEAPEQPP AEATLKPPAP 480 481 STSNPDEAPE EPPAETTLEP PAETTLEPPA DSTSKPAEES EEPPAETTLK PPVDSTSKPA 540 541 EAPVEQPKEE EHVDAGATAA SMDHDNASV 569 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGGAAGAC CGCCGAGTAA CGGAGGTCCT ACTTTCCGTT TCAACGCCAC TGAGGTCGCT 60 61 GAGATGGAAG CTATATTGCA AGCACATAAT GCTACAATGC CAGCTCGTGA AGTTCTCGTA 120 121 GCTCTTGCTG AGAAGTTTAG TTCTTCAGCG GAGAGATCTG GAAAAATTAT GGTTCAAATG 180 181 AAACAAGTTT GGAACTGGTT CCAGAATAGA CGATATGCTA TTAGAGCAAA AACAGCTAAG 240 241 GTTCCTGGTA AATTTAGTAC CCCGTCAGTG CCTCAAAGTG ATCCAGCTAT GGTAAGAACT 300 301 CCTGCAAAAT TGAGTGCGTC GTCACCTGTG CCTCAGAGTG ATCCAGCTGC AGTAAGGATT 360 361 ATGCCCCAAG CTTCTCTACC CATACCTTCT CCTCAAGTTA CAGTGAAATC AATGCCCCAA 420 421 GCGCCTCAAC CATTACCTGC TCCATCAGTG GCAGTACAAA ATGTGGGCAG GAGTGCTTCA 480 481 GATAACATTC AAATGGAGTT TGAAGCTAAA TCTGCAAGAG ATGGTGCATG GTATGATGTA 540 541 GCAAGCTTCC TATCACATAG ATCTGTGGAG ACTGCTGATC CGGAAGTTCT GGTTCGATTT 600 601 GCGGGGTTTG GAGCAGAGGA GGATGAGTGG GTAAATGTAC GTAAGCACGT AAGACAGCGA 660 661 TCCCTTCCAT GTGAATCGTC AGAATGTGTT GCAGTTCTCC CTGGCGATCT GATTCTTTGC 720 721 TTCCAGGAAG GCAAAGAGCA GGCTCTGTAC TTTGATGCGC ATGTCCTTGA TGCTCAAAGA 780 781 CGCAGACATG ATGTGAGAGG TTGCCGTTGT CGGTTTCTGG TTCGTTATGA TCATGATCAG 840 841 TCTGAGGAGA TTGTTCCTCT GAGAAAGGTT TGTCGTCGGC CTGAAACTGA CTATAGGTTG 900 901 CAGCAACTAA ATGCTGAATC TCTGAAGCAG CAGAAAATAG GTAACGACAT CACAAGGGGC 960 961 AACACTACAA AGGTCTACCC TCCAGCTGAA ACAACACAGA AAGCTCAAAC TGAATCAAGG 1020 1021 ATAAAACCAG CAGAACCAAC ACAAAAACAG CCTGCACCGG AGGACACCAC CAAGCCAGTA 1080 1081 CCCAATGTTG CTCCTATGCA GCTGCAGAAA TCTAGTACTG ATTCTCTAAC AGGAAATACT 1140 1141 TTGGTGGAAA CAACAACCCA GTGTATGGAA GAAATGACAG AGAAGCCTGT AGCTGGAACA 1200 1201 ACTGAGGTGC CAGATGAAGC ACCAGAGAAG TCTCCTGTTG AAGCACCAGC TGAAACAGCA 1260 1261 GGAAAGTCTC CTGCTGAAAC AACTCTTGAG CCTCCGGCTG CTTCAACGTC GAAGCCAGAT 1320 1321 GAAGCACCAG AGGAGCCTCC TACTGAAACA ACTCTTAAGC CTCCGGCTGC TTCAACAACT 1380 1381 AAGCCAGATG AAGCACCAGA GCAGCCTCCT GCTGAAGCAA CTCTTAAGCC TCCGGCTCCT 1440 1441 TCAACATCAA ATCCAGATGA AGCACCAGAA GAGCCTCCTG CTGAAACAAC TCTTGAGCCT 1500 1501 CCCGCTGAAA CAACTCTTGA GCCTCCGGCT GATTCAACGT CGAAGCCAGC TGAAGAATCA 1560 1561 GAGGAGCCTC CTGCTGAAAC TACTCTTAAA CCTCCGGTTG ATTCTACATC AAAGCCAGCC 1620 1621 GAAGCACCAG TGGAGCAGCC TAAGGAAGAG GAACATGTTG ATGCTGGAGC AACTGCAGCT 1680 1681 TCCATGGATC ATGATAATGC ATCTGTATAA 1710 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Org-1961 | Oryza glaberrima | 89.06 | 2e-67 | 224 |
| LLPS-Coc-0698 | Corchorus capsularis | 86.82 | 4e-63 | 213 |
| LLPS-Orgl-1643 | Oryza glumaepatula | 85.29 | 8e-67 | 230 |
| LLPS-Sol-2051 | Solanum lycopersicum | 79.02 | 0.0 | 656 |
| LLPS-Orbr-1847 | Oryza brachyantha | 78.95 | 3e-81 | 263 |
| LLPS-Hea-0455 | Helianthus annuus | 67.44 | 3e-138 | 428 |
| LLPS-Cus-1053 | Cucumis sativus | 67.32 | 2e-126 | 382 |
| LLPS-Prp-1385 | Prunus persica | 66.86 | 1e-140 | 419 |
| LLPS-Thc-0685 | Theobroma cacao | 66.76 | 7e-140 | 418 |
| LLPS-Glm-0816 | Glycine max | 65.53 | 9e-135 | 405 |
| LLPS-Arl-2901 | Arabidopsis lyrata | 65.03 | 2e-122 | 372 |
| LLPS-Art-0812 | Arabidopsis thaliana | 64.71 | 2e-121 | 369 |
| LLPS-Brr-3060 | Brassica rapa | 64.05 | 3e-122 | 371 |
| LLPS-Phv-1557 | Phaseolus vulgaris | 63.79 | 3e-112 | 345 |
| LLPS-Orp-0581 | Oryza punctata | 63.61 | 8e-108 | 335 |
| LLPS-Brn-1251 | Brassica napus | 62.87 | 5e-119 | 363 |
| LLPS-Amt-0910 | Amborella trichopoda | 62.62 | 3e-116 | 357 |
| LLPS-Ors-1652 | Oryza sativa | 62.62 | 4e-108 | 335 |
| LLPS-Mua-1353 | Musa acuminata | 62.62 | 3e-116 | 356 |
| LLPS-Bro-1181 | Brassica oleracea | 62.54 | 5e-119 | 363 |
| LLPS-Tra-2296 | Triticum aestivum | 61.84 | 4e-107 | 333 |
| LLPS-Mae-2069 | Manihot esculenta | 61.71 | 4e-134 | 402 |
| LLPS-Dac-1199 | Daucus carota | 61.51 | 5e-87 | 288 |
| LLPS-Sei-1731 | Setaria italica | 61.31 | 7e-110 | 340 |
| LLPS-Hov-1378 | Hordeum vulgare | 61.2 | 1e-100 | 318 |
| LLPS-Pot-1850 | Populus trichocarpa | 61.14 | 2e-127 | 384 |
| LLPS-Lep-2395 | Leersia perrieri | 61.04 | 2e-110 | 342 |
| LLPS-Gor-1350 | Gossypium raimondii | 61.0 | 3e-129 | 390 |
| LLPS-Zem-2409 | Zea mays | 60.26 | 2e-109 | 340 |
| LLPS-Viv-2061 | Vitis vinifera | 59.6 | 4e-137 | 411 |
| LLPS-Met-1745 | Medicago truncatula | 59.49 | 3e-135 | 405 |
| LLPS-Sob-2462 | Sorghum bicolor | 57.45 | 2e-101 | 319 |
| LLPS-Orm-0947 | Oryza meridionalis | 54.55 | 2e-71 | 239 |
| LLPS-Orni-2198 | Oryza nivara | 54.17 | 3e-76 | 252 |
| LLPS-Php-2253 | Physcomitrella patens | 52.7 | 4e-92 | 299 |
| LLPS-Brd-0675 | Brachypodium distachyon | 51.09 | 2e-102 | 321 |
| LLPS-Orb-2152 | Oryza barthii | 50.0 | 5e-82 | 265 |
| LLPS-Tru-0809 | Triticum urartu | 48.68 | 3e-74 | 246 |
| LLPS-Sem-1104 | Selaginella moellendorffii | 47.7 | 1e-60 | 216 |
| LLPS-Ori-0262 | Oryza indica | 47.66 | 5e-78 | 254 |
| LLPS-Orr-0375 | Oryza rufipogon | 40.2 | 2e-47 | 172 |
| LLPS-Sot-0031 | Solanum tuberosum | 37.59 | 3e-45 | 166 |