LLPS-Nia-1793
THF1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Protein thylakoid formation1, chloroplastic |
| Gene Name: | THF1, A4A49_12616 |
| Ensembl Gene: | A4A49_12616 |
| Ensembl Protein: | OIT00715 |
| Organism: | Nicotiana attenuata |
| Taxa ID: | 49451 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | OIT00715 | OIT00715 |
| UniProt | A0A1J6IPE5, A0A1J6IPE5_NICAT | |
| GeneBank | MJEQ01037189 | OIT00715.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAAVTSVSFS AIAQSAERKS SVSPSRSVDT FRFRSNVSFD CFNVRSSNSS FSSKSSTSRF 60 61 VVHCMSTDLP TVAETKMNFL KAYKRPIPTV YNTVLQELIV QQHLIKYKKS YRYDPVFALG 120 121 FVTVYDQLME GYPSEEDRDA IFKAYIEALN EDPVQYRHV 159 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGGCAG TTACTTCGGT ATCGTTCTCG GCGATTGCTC AATCCGCCGA AAGGAAATCC 60 61 TCCGTTTCTC CGTCTCGTTC TGTTGATACA TTTAGGTTCC GTTCCAACGT TTCCTTTGAT 120 121 TGTTTCAATG TTCGATCTTC AAATTCCAGT TTCAGTTCGA AATCTTCCAC CTCTCGCTTT 180 181 GTCGTCCATT GCATGTCCAC AGATTTGCCA ACTGTGGCCG AGACTAAAAT GAATTTCTTG 240 241 AAGGCTTATA AGCGTCCAAT TCCAACTGTC TACAACACAG TGTTACAAGA GCTAATTGTG 300 301 CAACAACATT TGATAAAGTA CAAGAAATCC TACCGATATG ATCCCGTGTT TGCGCTTGGT 360 361 TTCGTCACTG TATATGATCA ACTTATGGAA GGCTACCCAA GTGAAGAGGA TCGTGATGCT 420 421 ATCTTCAAAG CATATATAGA GGCGCTCAAT GAGGATCCTG TGCAATACAG GCATGTTTAA 480 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Tru-0583 | Triticum urartu | 82.95 | 1e-48 | 166 |
| LLPS-Sot-1825 | Solanum tuberosum | 81.25 | 2e-76 | 236 |
| LLPS-Sob-0472 | Sorghum bicolor | 80.68 | 4e-49 | 166 |
| LLPS-Sol-1556 | Solanum lycopersicum | 79.59 | 2e-64 | 204 |
| LLPS-Orb-2102 | Oryza barthii | 78.43 | 2e-50 | 169 |
| LLPS-Ori-0379 | Oryza indica | 78.43 | 2e-50 | 169 |
| LLPS-Orni-0664 | Oryza nivara | 78.43 | 2e-50 | 169 |
| LLPS-Org-1721 | Oryza glaberrima | 78.43 | 2e-50 | 169 |
| LLPS-Orp-0741 | Oryza punctata | 78.43 | 6e-51 | 171 |
| LLPS-Orr-0597 | Oryza rufipogon | 77.45 | 6e-49 | 165 |
| LLPS-Ors-1916 | Oryza sativa | 77.45 | 6e-49 | 165 |
| LLPS-Orbr-1603 | Oryza brachyantha | 77.45 | 3e-51 | 171 |
| LLPS-Sei-2095 | Setaria italica | 76.47 | 2e-50 | 169 |
| LLPS-Sem-0718 | Selaginella moellendorffii | 71.11 | 3e-43 | 148 |
| LLPS-Php-1036 | Physcomitrella patens | 70.65 | 2e-45 | 157 |
| LLPS-Mae-0992 | Manihot esculenta | 69.51 | 3e-67 | 213 |
| LLPS-Prp-0538 | Prunus persica | 66.46 | 6e-66 | 209 |
| LLPS-Viv-1440 | Vitis vinifera | 66.46 | 2e-62 | 201 |
| LLPS-Coc-1634 | Corchorus capsularis | 65.66 | 1e-61 | 199 |
| LLPS-Vir-1658 | Vigna radiata | 64.63 | 4e-61 | 197 |
| LLPS-Glm-0818 | Glycine max | 64.63 | 3e-63 | 202 |
| LLPS-Thc-0183 | Theobroma cacao | 64.63 | 3e-62 | 200 |
| LLPS-Cus-2321 | Cucumis sativus | 64.42 | 2e-62 | 201 |
| LLPS-Via-1705 | Vigna angularis | 63.41 | 2e-60 | 195 |
| LLPS-Phv-2479 | Phaseolus vulgaris | 63.41 | 1e-59 | 193 |
| LLPS-Gor-1021 | Gossypium raimondii | 62.8 | 7e-60 | 194 |
| LLPS-Arl-2479 | Arabidopsis lyrata | 62.66 | 5e-56 | 184 |
| LLPS-Pot-0380 | Populus trichocarpa | 62.58 | 5e-58 | 189 |
| LLPS-Bro-2960 | Brassica oleracea | 62.5 | 3e-59 | 192 |
| LLPS-Brr-2631 | Brassica rapa | 62.5 | 4e-59 | 192 |
| LLPS-Met-1956 | Medicago truncatula | 62.42 | 4e-59 | 192 |
| LLPS-Brn-3133 | Brassica napus | 61.88 | 2e-59 | 193 |
| LLPS-Hea-0440 | Helianthus annuus | 61.49 | 2e-58 | 190 |
| LLPS-Art-0818 | Arabidopsis thaliana | 60.38 | 1e-56 | 186 |
| LLPS-Dac-2422 | Daucus carota | 59.51 | 6e-53 | 176 |
| LLPS-Lep-2327 | Leersia perrieri | 58.75 | 3e-52 | 174 |
| LLPS-Chr-1372 | Chlamydomonas reinhardtii | 58.43 | 2e-31 | 119 |
| LLPS-Amt-0299 | Amborella trichopoda | 57.58 | 7e-57 | 186 |
| LLPS-Orgl-0036 | Oryza glumaepatula | 57.5 | 1e-50 | 170 |
| LLPS-Zem-1125 | Zea mays | 56.52 | 6e-49 | 165 |
| LLPS-Hov-1723 | Hordeum vulgare | 56.25 | 1e-51 | 172 |
| LLPS-Brd-0679 | Brachypodium distachyon | 56.25 | 1e-50 | 170 |
| LLPS-Tra-1163 | Triticum aestivum | 56.25 | 3e-52 | 174 |
| LLPS-Mua-2376 | Musa acuminata | 54.66 | 3e-49 | 166 |
| LLPS-Osl-1192 | Ostreococcus lucimarinus | 50.57 | 6e-24 | 98.2 |
| LLPS-Gas-1319 | Galdieria sulphuraria | 43.04 | 5e-16 | 77.4 |
| LLPS-Cym-1074 | Cyanidioschyzon merolae | 36.47 | 5e-11 | 63.5 |