LLPS-Nia-1074
CID6
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Polyadenylate-binding protein-interacting protein 6 |
| Gene Name: | CID6, A4A49_17056 |
| Ensembl Gene: | A4A49_17056 |
| Ensembl Protein: | OIT39939 |
| Organism: | Nicotiana attenuata |
| Taxa ID: | 49451 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | OIT39939 | OIT39939 |
| UniProt | A0A314LFY1, A0A314LFY1_NICAT | |
| GeneBank | MJEQ01000067 | OIT39939.1 |
| RefSeq | XM_019403761.1 | XP_019259306.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MKTGTSTLNP YAESYVPISR RGAPDGNKEA RFSPKEFKSG SEAVWLAPGV TAGGSQQQTH 60 61 QTADQYKLKD YSAYGSPSHS PAGAMVKQVL DEESDMDLAY LQMTFPGMSD ESLSEVYLAN 120 121 KCDLDAAVDM LNQLELYSGD FSEKLPDTLD IGDVSDSGFL GDSSSQKLKT VVGETVTVAS 180 181 SSGLSDSAPG S 191 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAAGACAG GAACATCAAC TCTGAATCCT TATGCAGAAT CTTATGTGCC TATTTCGAGA 60 61 AGAGGGGCAC CTGATGGAAA CAAAGAAGCT AGATTTTCTC CAAAAGAGTT CAAGAGTGGA 120 121 AGTGAGGCTG TTTGGTTGGC ACCTGGTGTC ACAGCAGGTG GAAGTCAACA GCAGACTCAC 180 181 CAAACTGCTG ATCAGTACAA ACTGAAAGAC TATTCAGCTT ATGGCTCACC ATCACATAGT 240 241 CCTGCAGGAG CTATGGTTAA ACAAGTTCTG GACGAGGAAT CCGACATGGA TTTGGCTTAT 300 301 CTTCAGATGA CTTTTCCTGG CATGTCGGAT GAATCGCTTT CTGAGGTTTA TTTAGCAAAC 360 361 AAATGTGACC TTGATGCTGC TGTTGACATG CTGAATCAGC TTGAGCTTTA CTCTGGTGAT 420 421 TTTTCTGAAA AGCTTCCAGA CACTCTTGAC ATTGGTGACG TGTCGGACTC TGGGTTCTTG 480 481 GGCGATAGTT CATCTCAGAA ATTGAAGACG GTGGTAGGTG AAACTGTTAC AGTTGCTTCG 540 541 TCATCCGGTT TATCAGACTC AGCTCCAGGC AGTTAA 576 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Sot-2289 | Solanum tuberosum | 85.96 | 2e-103 | 303 |
| LLPS-Sol-2419 | Solanum lycopersicum | 84.27 | 2e-102 | 300 |
| LLPS-Arl-1901 | Arabidopsis lyrata | 59.46 | 2e-06 | 51.2 |
| LLPS-Prp-1162 | Prunus persica | 48.21 | 3e-07 | 53.5 |
| LLPS-Pot-1899 | Populus trichocarpa | 47.92 | 2e-07 | 53.9 |
| LLPS-Met-2648 | Medicago truncatula | 45.83 | 1e-06 | 51.6 |
| LLPS-Mae-1868 | Manihot esculenta | 44.26 | 8e-08 | 55.5 |
| LLPS-Art-1856 | Arabidopsis thaliana | 43.27 | 2e-32 | 120 |
| LLPS-Thc-2083 | Theobroma cacao | 43.1 | 2e-07 | 54.3 |
| LLPS-Via-0681 | Vigna angularis | 42.86 | 4e-07 | 53.1 |
| LLPS-Coc-1358 | Corchorus capsularis | 42.65 | 7e-08 | 55.5 |
| LLPS-Viv-0085 | Vitis vinifera | 41.89 | 2e-09 | 60.1 |
| LLPS-Brn-2991 | Brassica napus | 39.2 | 3e-22 | 94.0 |
| LLPS-Brr-2575 | Brassica rapa | 39.2 | 3e-22 | 94.0 |
| LLPS-Phv-1108 | Phaseolus vulgaris | 39.19 | 2e-06 | 50.8 |
| LLPS-Gor-0305 | Gossypium raimondii | 39.13 | 3e-07 | 53.5 |
| LLPS-Bro-3041 | Brassica oleracea | 38.75 | 5e-20 | 87.4 |