LLPS-Mum-a1062
Trpv2
▼ OVERVIEW
Status: | Reviewed |
Protein Name: | Transient receptor potential cation channel subfamily V member 2 |
Gene Name: | Trpv2, Grc |
Ensembl Gene: | ENSMUSG00000018507.16 |
Ensembl Protein: | ENSMUSP00000018651.7 |
Organism: | Mus musculus |
Taxa ID: | 10090 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Description | Tissue/Cell | PMIDs |
---|---|---|---|
Postsynaptic density | "...We report the first direct comparison of the proteome of triplicate isolates of mouse and human cortical postsynaptic densities. The mouse postsynaptic density comprised 1556 proteins and the human one 1461." | Mouse cortex | 23071613 |
▼ FUNCTION
Calcium-permeable, non-selective cation channel with an outward rectification. Seems to be regulated, at least in part, by IGF-I, PDGF and neuropeptide head activator. May transduce physical stimuli in mast cells. Activated by temperatures higher than 52 degrees Celsius; is not activated by vanilloids and acidic pH. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSMUST00000018651.13 | ENSMUSP00000018651.7 |
Ensembl | ENSMUST00000102643.1 | ENSMUSP00000099703.1 |
UniProt | Q9WTR1, TRPV2_MOUSE, Q99K71 | |
GeneBank | AK089004, AL596181, AB021665, BC005415 | BAC40695.1, BAA78478.1, AAH05415.1 |
RefSeq | NM_011706.2, XM_006533165.2, XM_011248971.1 | NP_035836.2, XP_006533228.1, XP_011247273.1 |
Entrez | 22368 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MTSASNPPAF RLETSDGDEE GSAEVNKGKN EPPPMESPFQ GEDRNFSPQI KVNLNYRKGL 60 61 GPSQQDPNRF DRDRLFSVVS RGVPEELTGL LEYLRRTSKY LTDSAYTEGS TGKTCLMKAV 120 121 LNLQDGVNAC ILPLLQIDRD SGNPQPLVNA QCTDEFYRGH SALHIAIEKR SLWCVKLLVE 180 181 NGANVHIRAC GRFFQKHQGT CFYFGELPLS LAACTKQWDV VTYLLENPHQ PASLEATDSL 240 241 GNTVLHALVM IADNSPENSA LVIHMYDSLL QMGARLCPTV QLEDICNHQG LTPLKLAAKE 300 301 GKIEIFRHIL QREFSGLYQP LSRKFTEWCY GPVRVSLYDL SSVDSWEKNS VLEIIAFHCK 360 361 SPHRHRMVVL EPLNKLLQEK WDRLIPRFFF NFACYLVYMI IFTIVAYHQP SLEQPAIPSS 420 421 KATFGDSMLL LGHILILLGG IYLLLGQLWY FWRRRLFIWI SFMDSYFEIL FLVQALLTVL 480 481 SQVLRFVETE WYLPLLVSSL VLGWLNLLYY TRGFQHTGIY SVMIQKVILR DLLRFLLVYL 540 541 VFLFGFAVAL VSLSREARSP KAPEDSNTTV TEKPTLGQEE EPVPYGGILD ASLELFKFTI 600 601 GMGELAFQEQ LRFRGVVLLL LLAYVLLTYV LLLNMLIALM SETVNSVATD SWSIWKLQKA 660 661 ISVLEMENGY WWCRRKRHRA GRLLKVGTKG DGIPDERWCF RVEEVNWAAW EKTLPTLSED 720 721 PSGAGITGYK KNPTSKPGKN SASEEDHLPL QVLQSH 756 |
Nucleotide CDS Sequence (FASTA) |
1 ATGACTTCAG CCTCCAACCC CCCAGCTTTT AGGCTGGAGA CGTCCGATGG AGATGAAGAA 60 61 GGCAGTGCTG AGGTGAACAA AGGAAAGAAT GAGCCACCCC CCATGGAGTC TCCCTTCCAG 120 121 GGAGAGGACC GGAACTTCTC CCCTCAGATT AAAGTGAATC TCAACTACCG AAAGGGACTG 180 181 GGTCCCAGCC AACAGGACCC AAATCGGTTT GACCGTGACC GACTCTTCAG TGTGGTCTCC 240 241 CGGGGTGTCC CCGAGGAGCT GACTGGACTG CTAGAGTACC TGCGCCGGAC CAGCAAGTAC 300 301 CTCACTGACT CGGCATACAC AGAAGGCTCC ACTGGAAAGA CGTGCCTGAT GAAGGCTGTG 360 361 CTGAACCTTC AGGATGGGGT CAATGCCTGT ATCCTGCCGC TGCTGCAGAT TGACAGGGAT 420 421 TCCGGCAATC CTCAGCCCCT TGTCAATGCC CAGTGCACCG ATGAGTTCTA CCGAGGCCAC 480 481 AGTGCGCTGC ACATCGCCAT AGAGAAGAGG AGCCTGTGGT GCGTGAAGCT GCTGGTAGAG 540 541 AATGGAGCGA ATGTTCACAT CCGAGCCTGT GGCCGCTTCT TCCAAAAGCA CCAAGGAACT 600 601 TGTTTCTATT TTGGAGAGCT ACCTCTTTCT CTGGCAGCGT GCACCAAGCA GTGGGATGTG 660 661 GTGACCTACC TCCTGGAGAA CCCACACCAG CCTGCCAGCC TGGAGGCCAC CGACTCCCTG 720 721 GGCAACACAG TCCTGCATGC TCTGGTAATG ATTGCAGACA ACTCACCTGA GAACAGTGCG 780 781 CTGGTGATCC ACATGTATGA CAGCCTTCTC CAAATGGGGG CCCGCCTCTG CCCCACTGTA 840 841 CAGCTTGAGG ATATCTGCAA CCATCAAGGC CTCACACCCC TGAAGTTGGC TGCCAAGGAA 900 901 GGTAAAATTG AGATCTTCAG GCACATCCTG CAGCGGGAGT TCTCAGGGCT GTACCAGCCC 960 961 CTTTCCCGAA AGTTCACCGA GTGGTGCTAC GGTCCTGTCC GAGTGTCACT GTACGACCTG 1020 1021 TCCTCTGTGG ACAGTTGGGA AAAGAACTCG GTCCTGGAAA TCATCGCTTT CCATTGCAAG 1080 1081 AGCCCGCACC GGCACCGCAT GGTGGTTTTA GAGCCACTGA ACAAGCTTCT GCAGGAGAAA 1140 1141 TGGGATCGGC TCATCCCAAG ATTCTTCTTC AACTTCGCCT GTTACTTGGT CTACATGATC 1200 1201 ATCTTCACCA TAGTTGCCTA CCACCAGCCT TCCCTGGAGC AGCCAGCCAT TCCCTCATCA 1260 1261 AAAGCGACTT TTGGGGACTC CATGCTGCTG TTGGGCCACA TTCTGATCCT GCTTGGGGGT 1320 1321 ATTTACCTCT TACTGGGCCA GCTGTGGTAC TTTTGGCGGC GGCGCCTGTT CATCTGGATC 1380 1381 TCGTTCATGG ACAGTTACTT TGAAATCCTC TTCCTTGTCC AGGCGCTGCT CACAGTGCTG 1440 1441 TCCCAGGTGC TGCGCTTCGT GGAGACTGAA TGGTACCTCC CCCTGTTAGT GTCATCCCTA 1500 1501 GTGCTGGGCT GGCTGAACCT GCTTTATTAT ACACGTGGCT TTCAGCACAC AGGCATCTAC 1560 1561 AGTGTCATGA TCCAAAAGGT CATTCTGCGA GACCTGCTCC GCTTCCTGCT GGTCTACCTA 1620 1621 GTCTTCCTTT TCGGCTTTGC TGTAGCCCTA GTAAGCTTGA GCCGGGAGGC CCGAAGTCCC 1680 1681 AAAGCCCCTG AAGATAGCAA CACCACTGTG ACGGAAAAGC CCACGCTGGG TCAGGAGGAG 1740 1741 GAGCCAGTCC CATATGGGGG CATTCTGGAT GCCTCCCTAG AGCTGTTCAA GTTCACCATT 1800 1801 GGTATGGGTG AGCTGGCTTT CCAGGAACAG CTGCGCTTTC GTGGGGTGGT GCTGCTGTTG 1860 1861 CTGTTGGCCT ACGTCCTCCT CACCTACGTC CTACTGCTCA ACATGCTCAT TGCCCTCATG 1920 1921 AGTGAGACTG TCAACAGCGT TGCCACTGAC AGCTGGAGCA TCTGGAAGTT GCAGAAAGCC 1980 1981 ATCTCTGTCT TGGAGATGGA GAATGGTTAC TGGTGGTGCA GGAGGAAAAG GCATCGCGCA 2040 2041 GGGAGGCTGC TGAAAGTTGG CACCAAAGGG GATGGTATAC CTGATGAGCG CTGGTGCTTC 2100 2101 AGGGTGGAGG AAGTAAACTG GGCTGCATGG GAGAAGACCC TTCCCACCTT ATCTGAGGAT 2160 2161 CCATCAGGGG CAGGCATCAC TGGTTATAAA AAGAACCCAA CCTCTAAACC TGGGAAGAAC 2220 2221 AGTGCCTCAG AGGAAGACCA TCTGCCTCTT CAGGTCCTCC AGTCCCACTG A 2271 |
▼ KEYWORD
ID | Family |
ANK repeat | |
Calcium | |
Calcium channel | |
Calcium transport | |
Cell membrane | |
Complete proteome | |
Cytoplasm | |
Glycoprotein | |
Ion channel | |
Ion transport | |
Membrane | |
Phosphoprotein | |
Reference proteome | |
Repeat | |
Transmembrane | |
Transmembrane helix | |
Transport
|
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Axon | |
Cellular Component | Axonal growth cone | |
Cellular Component | Cell body | |
Cellular Component | Cell surface | |
Cellular Component | Cytoplasm | |
Cellular Component | Endomembrane system | |
Cellular Component | Growth cone membrane | |
Cellular Component | Integral component of plasma membrane | |
Cellular Component | Lamellipodium | |
Cellular Component | Melanosome | |
Cellular Component | Plasma membrane | |
Molecular Function | Calcium channel activity | |
Molecular Function | Cation channel activity | |
Molecular Function | Identical protein binding | |
Molecular Function | Ion channel activity | |
Biological Process | Negative regulation of cell population proliferation | |
Biological Process | Positive regulation of axon extension | |
Biological Process | Positive regulation of calcium ion import | |
Biological Process | Positive regulation of cold-induced thermogenesis | |
Biological Process | Response to heat | |
Biological Process | Response to temperature stimulus |
▼ ANNOTATION
Disorder | ||||
IUPred2A |
Mutation | ||||
CGAP |
Drug | ||||
GRAC |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Function | ||||
PIRSF | CellMarker | RaftProt |
Localization | ||||
COMPARTMENTS |
Expression | ||||
ArrayExpress | GXD | TISSUES |
Element | ||||
miRWalk | RAID | microRNA.org |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Ran-a1053 | Rattus norvegicus | 92.24 | 0.0 | 1339 |
LLPS-Mea-a1006 | Mesocricetus auratus | 91.22 | 0.0 | 1348 |
LLPS-Ict-a1039 | Ictidomys tridecemlineatus | 85.75 | 0.0 | 1230 |
LLPS-Dio-a1015 | Dipodomys ordii | 84.26 | 0.0 | 1249 |
LLPS-Orc-a978 | Oryctolagus cuniculus | 83.22 | 0.0 | 1180 |
LLPS-Eqc-a1058 | Equus caballus | 83.03 | 0.0 | 1211 |
LLPS-Cas-a896 | Carlito syrichta | 82.88 | 0.0 | 1222 |
LLPS-Gog-a1048 | Gorilla gorilla | 82.83 | 0.0 | 873 |
LLPS-Otg-a1039 | Otolemur garnettii | 82.25 | 0.0 | 1160 |
LLPS-Fec-a1055 | Felis catus | 82.22 | 0.0 | 1201 |
LLPS-Caf-a1038 | Canis familiaris | 81.72 | 0.0 | 1191 |
LLPS-Urm-a939 | Ursus maritimus | 81.41 | 0.0 | 1171 |
LLPS-Aim-a1004 | Ailuropoda melanoleuca | 81.37 | 0.0 | 1190 |
LLPS-Pat-a1064 | Pan troglodytes | 80.52 | 0.0 | 1197 |
LLPS-Maf-a1051 | Macaca fascicularis | 80.39 | 0.0 | 1212 |
LLPS-Pap-a1030 | Pan paniscus | 80.39 | 0.0 | 1196 |
LLPS-Aon-a1061 | Aotus nancymaae | 80.37 | 0.0 | 1201 |
LLPS-Hos-a1078 | Homo sapiens | 80.29 | 0.0 | 1193 |
LLPS-Paa-a1058 | Papio anubis | 80.26 | 0.0 | 1210 |
LLPS-Mam-a1041 | Macaca mulatta | 80.26 | 0.0 | 1210 |
LLPS-Poa-a1030 | Pongo abelii | 80.16 | 0.0 | 1191 |
LLPS-Mal-a1036 | Mandrillus leucophaeus | 80.13 | 0.0 | 1210 |
LLPS-Chs-a1048 | Chlorocebus sabaeus | 80.13 | 0.0 | 1208 |
LLPS-Caj-a1048 | Callithrix jacchus | 79.97 | 0.0 | 1211 |
LLPS-Loa-a1025 | Loxodonta africana | 79.95 | 0.0 | 1117 |
LLPS-Mup-a1014 | Mustela putorius furo | 79.92 | 0.0 | 1163 |
LLPS-Fud-a1009 | Fukomys damarensis | 79.84 | 0.0 | 1174 |
LLPS-Nol-a1027 | Nomascus leucogenys | 79.5 | 0.0 | 1193 |
LLPS-Cea-a1056 | Cercocebus atys | 78.17 | 0.0 | 1167 |
LLPS-Ova-a1015 | Ovis aries | 78.11 | 0.0 | 1120 |
LLPS-Cap-a1051 | Cavia porcellus | 77.45 | 0.0 | 1120 |
LLPS-Bot-a1056 | Bos taurus | 77.06 | 0.0 | 1108 |
LLPS-Myl-a978 | Myotis lucifugus | 72.51 | 0.0 | 989 |
LLPS-Man-a1059 | Macaca nemestrina | 69.86 | 0.0 | 1006 |
LLPS-Mod-a1007 | Monodelphis domestica | 67.19 | 0.0 | 1014 |
LLPS-Ora-a868 | Ornithorhynchus anatinus | 63.71 | 0.0 | 922 |
LLPS-Sah-a945 | Sarcophilus harrisii | 61.46 | 0.0 | 870 |
LLPS-Pes-a897 | Pelodiscus sinensis | 58.57 | 0.0 | 790 |
LLPS-Anp-a832 | Anas platyrhynchos | 57.7 | 0.0 | 780 |
LLPS-Meg-a837 | Meleagris gallopavo | 57.52 | 0.0 | 799 |
LLPS-Gaga-a946 | Gallus gallus | 55.7 | 0.0 | 797 |
LLPS-Fia-a925 | Ficedula albicollis | 55.61 | 0.0 | 772 |
LLPS-Anc-a951 | Anolis carolinensis | 51.08 | 7e-135 | 415 |
LLPS-Sus-a1057 | Sus scrofa | 50.99 | 0.0 | 658 |
LLPS-Rhb-a1047 | Rhinopithecus bieti | 50.68 | 0.0 | 659 |
LLPS-Tag-a907 | Taeniopygia guttata | 50.22 | 0.0 | 658 |