LLPS-Mum-4183
Atp6v1b2
▼ OVERVIEW
Status: | Reviewed |
Protein Name: | V-type proton ATPase subunit B, brain isoform |
Gene Name: | Atp6v1b2, Atp6b2, Vat2 |
Ensembl Gene: | ENSMUSG00000006273.14 |
Ensembl Protein: | ENSMUSP00000006435.7 |
Organism: | Mus musculus |
Taxa ID: | 10090 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Description | Tissue/Cell | PMIDs |
---|---|---|---|
Postsynaptic density | "...We report the first direct comparison of the proteome of triplicate isolates of mouse and human cortical postsynaptic densities. The mouse postsynaptic density comprised 1556 proteins and the human one 1461." | Mouse cortex | 23071613 |
Stress granule | Predicted from orthologs | N/A | (View) |
▼ FUNCTION
Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSMUST00000006435.7 | ENSMUSP00000006435.7 |
UniProt | P62814, VATB2_MOUSE, O09045, P50517, Q3TG74, Q3TL62, Q3TVK6, Q3TWR0, Q3U791, Q3U7C8, Q3U9Z0, Q3UAW7 | |
GeneBank | AK159153, U13838, BC046302, AK151322, AK151200, AK168852, AK169155, AK146499, BC012497, AK151586, AK160854, AK159986, AK159701, Y12634, AK169270, AK159133, AK152718, BC085300, AK152766, AK159586, AK160080, AK166669 | BAE40674.1, BAE31479.1, BAE41031.1, CAA73182.1, BAE30526.1, AAH85300.1, BAE34860.1, AAH12497.1, AAH46302.1, BAE31441.1, BAE35612.1, AAC52411.1, BAE30303.1, BAE40934.1, BAE38930.1, BAE34845.1, BAE27215.1, BAE35536.1, BAE35300.1, BAE35206.1, BAE30197.1, BAE36047.1 |
RefSeq | NM_007509.3 | NP_031535.2 |
Entrez | 11966 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MALRAMRGIV NGAAPELPVP TGGPMAGARE QALAVSRNYL SQPRLTYKTV SGVNGPLVIL 60 61 DHVKFPRYAE IVHLTLPDGT KRSGQVLEVS GSKAVVQVFE GTSGIDAKKT SCEFTGDILR 120 121 TPVSEDMLGR VFNGSGKPID RGPVVLAEDF LDIMGQPINP QCRIYPEEMI QTGISAIDGM 180 181 NSIARGQKIP IFSAAGLPHN EIAAQICRQA GLVKKSKDVV DYSEENFAIV FAAMGVNMET 240 241 ARFFKSDFEE NGSMDNVCLF LNLANDPTIE RIITPRLALT TAEFLAYQCE KHVLVILTDM 300 301 SSYAEALREV SAAREEVPGR RGFPGYMYTD LATIYERAGR VEGRNGSITQ IPILTMPNDD 360 361 ITHPIPDLTG YITEGQIYVD RQLHNRQIYP PINVLPSLSR LMKSAIGEGM TRKDHADVSN 420 421 QLYACYAIGK DVQAMKAVVG EEALTSDDLL YLEFLQKFEK NFITQGPYEN RTVYETLDIG 480 481 WQLLRIFPKE MLKRIPQSTL SEFYPRDSAK H 511 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCGTTGC GAGCGATGCG GGGAATCGTG AACGGGGCCG CACCCGAACT GCCCGTGCCC 60 61 ACCGGTGGGC CGATGGCCGG AGCTCGGGAG CAGGCGCTGG CGGTGAGCCG GAACTACCTA 120 121 TCCCAGCCTC GTCTCACCTA CAAGACTGTC TCTGGGGTGA ATGGTCCACT AGTGATCCTA 180 181 GATCATGTGA AGTTTCCCAG ATACGCTGAG ATTGTCCACT TGACATTACC AGATGGCACA 240 241 AAGAGAAGTG GGCAAGTCCT AGAAGTTAGT GGCTCCAAAG CAGTGGTTCA GGTATTTGAA 300 301 GGGACATCTG GTATAGACGC CAAGAAAACA TCCTGTGAGT TTACTGGAGA TATTCTCCGA 360 361 ACACCAGTGT CTGAGGATAT GCTTGGTCGA GTATTCAACG GATCAGGAAA ACCCATTGAC 420 421 CGAGGCCCTG TGGTGCTGGC TGAAGACTTC CTTGACATCA TGGGTCAGCC AATCAACCCT 480 481 CAGTGTCGGA TCTATCCAGA AGAGATGATT CAGACGGGCA TTTCCGCCAT CGATGGCATG 540 541 AACAGTATTG CTAGGGGACA GAAAATCCCC ATCTTTTCTG CTGCTGGATT ACCACACAAC 600 601 GAGATTGCAG CTCAGATCTG TCGCCAGGCT GGTTTGGTAA AGAAATCCAA AGATGTAGTG 660 661 GACTATAGTG AAGAAAATTT TGCCATTGTG TTTGCTGCTA TGGGAGTAAA CATGGAAACA 720 721 GCCCGGTTCT TTAAATCTGA CTTTGAAGAA AATGGCTCAA TGGACAATGT CTGCCTTTTT 780 781 TTGAATCTGG CTAATGACCC AACCATTGAG CGGATCATCA CTCCTCGCCT GGCTCTGACC 840 841 ACGGCCGAGT TTCTGGCATA TCAGTGTGAG AAGCACGTGC TGGTGATCCT GACGGACATG 900 901 AGCTCCTACG CTGAAGCGCT GCGAGAGGTT TCAGCTGCCA GGGAAGAGGT CCCTGGTCGG 960 961 CGAGGCTTCC CAGGCTACAT GTATACCGAC TTAGCCACAA TCTATGAACG TGCCGGTCGA 1020 1021 GTGGAAGGTA GAAACGGCTC TATTACCCAA ATCCCTATTC TCACCATGCC CAATGACGAT 1080 1081 ATCACTCATC CCATCCCTGA CTTGACTGGG TACATTACTG AGGGCCAGAT CTATGTGGAC 1140 1141 AGACAGCTGC ACAACAGACA GATTTACCCT CCTATTAATG TGCTGCCCTC ACTCTCTCGG 1200 1201 TTAATGAAGT CAGCTATCGG AGAAGGAATG ACCAGAAAGG ATCACGCTGA TGTGTCTAAC 1260 1261 CAGTTGTATG CGTGCTATGC CATCGGTAAG GACGTGCAAG CCATGAAAGC CGTGGTGGGA 1320 1321 GAGGAAGCCC TGACCTCAGA TGATCTCCTT TACCTGGAAT TTCTGCAGAA GTTTGAGAAG 1380 1381 AACTTCATTA CTCAGGGTCC CTATGAAAAC CGAACTGTTT ATGAGACTTT GGACATTGGC 1440 1441 TGGCAGTTGC TTCGAATCTT CCCCAAAGAA ATGCTGAAGA GAATCCCTCA GAGCACCCTG 1500 1501 AGCGAATTTT ACCCTCGAGA CTCTGCAAAA CACTAG 1536 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Apical plasma membrane | |
Cellular Component | Cytoplasm | |
Cellular Component | Cytosol | |
Cellular Component | Endomembrane system | |
Cellular Component | Integral component of membrane | |
Cellular Component | Intracellular membrane-bounded organelle | |
Cellular Component | Melanosome | |
Cellular Component | Microvillus | |
Cellular Component | Myelin sheath | |
Cellular Component | Plasma membrane | |
Cellular Component | Proton-transporting V-type ATPase, V1 domain | |
Cellular Component | Ruffle | |
Molecular Function | ATP binding | |
Molecular Function | Hydrolase activity | |
Biological Process | ATP hydrolysis coupled proton transport | |
Biological Process | ATP metabolic process |
▼ ANNOTATION
Disorder | ||||
IUPred2A |
Mutation | ||||
CGAP |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Function | ||||
CGDB | PIRSF | CellMarker | RaftProt |
Localization | ||||
COMPARTMENTS |
Expression | ||||
ArrayExpress | GXD | TISSUES |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Ran-4262 | Rattus norvegicus | 100.0 | 0.0 | 1057 |
LLPS-Mea-1083 | Mesocricetus auratus | 99.22 | 0.0 | 1049 |
LLPS-Chs-2775 | Chlorocebus sabaeus | 99.02 | 0.0 | 1047 |
LLPS-Maf-1940 | Macaca fascicularis | 99.02 | 0.0 | 1047 |
LLPS-Aon-3580 | Aotus nancymaae | 99.02 | 0.0 | 1046 |
LLPS-Cea-3325 | Cercocebus atys | 99.02 | 0.0 | 1047 |
LLPS-Caj-1794 | Callithrix jacchus | 99.02 | 0.0 | 1046 |
LLPS-Bot-3110 | Bos taurus | 99.02 | 0.0 | 1049 |
LLPS-Paa-4373 | Papio anubis | 99.02 | 0.0 | 1048 |
LLPS-Hos-4297 | Homo sapiens | 99.02 | 0.0 | 1048 |
LLPS-Pap-4453 | Pan paniscus | 99.02 | 0.0 | 1047 |
LLPS-Pat-4295 | Pan troglodytes | 99.02 | 0.0 | 1047 |
LLPS-Man-1807 | Macaca nemestrina | 99.02 | 0.0 | 1047 |
LLPS-Rhb-1157 | Rhinopithecus bieti | 99.02 | 0.0 | 1047 |
LLPS-Orc-3498 | Oryctolagus cuniculus | 99.02 | 0.0 | 1046 |
LLPS-Mam-3269 | Macaca mulatta | 99.02 | 0.0 | 1048 |
LLPS-Nol-1044 | Nomascus leucogenys | 99.02 | 0.0 | 1048 |
LLPS-Mal-2573 | Mandrillus leucophaeus | 99.0 | 0.0 | 1022 |
LLPS-Sus-0738 | Sus scrofa | 98.83 | 0.0 | 1047 |
LLPS-Gog-4614 | Gorilla gorilla | 98.83 | 0.0 | 1045 |
LLPS-Mup-1388 | Mustela putorius furo | 98.83 | 0.0 | 1047 |
LLPS-Urm-0215 | Ursus maritimus | 98.83 | 0.0 | 1047 |
LLPS-Caf-4088 | Canis familiaris | 98.83 | 0.0 | 1048 |
LLPS-Eqc-4140 | Equus caballus | 98.43 | 0.0 | 1043 |
LLPS-Meg-2427 | Meleagris gallopavo | 98.28 | 0.0 | 949 |
LLPS-Anp-1713 | Anas platyrhynchos | 98.28 | 0.0 | 950 |
LLPS-Ova-3949 | Ovis aries | 98.25 | 0.0 | 1044 |
LLPS-Ict-4324 | Ictidomys tridecemlineatus | 98.24 | 0.0 | 1039 |
LLPS-Aim-4233 | Ailuropoda melanoleuca | 98.06 | 0.0 | 1041 |
LLPS-Dio-3734 | Dipodomys ordii | 98.04 | 0.0 | 1043 |
LLPS-Cap-3694 | Cavia porcellus | 98.04 | 0.0 | 1041 |
LLPS-Otg-2753 | Otolemur garnettii | 97.86 | 0.0 | 1037 |
LLPS-Myl-1717 | Myotis lucifugus | 97.65 | 0.0 | 1035 |
LLPS-Fud-2166 | Fukomys damarensis | 97.46 | 0.0 | 1034 |
LLPS-Loa-3019 | Loxodonta africana | 97.06 | 0.0 | 1022 |
LLPS-Ora-2584 | Ornithorhynchus anatinus | 96.63 | 1e-53 | 184 |
LLPS-Fia-3841 | Ficedula albicollis | 95.64 | 0.0 | 949 |
LLPS-Fec-1598 | Felis catus | 95.45 | 0.0 | 1035 |
LLPS-Pes-0937 | Pelodiscus sinensis | 95.25 | 0.0 | 954 |
LLPS-Pof-1148 | Poecilia formosa | 95.04 | 0.0 | 962 |
LLPS-Gaga-3035 | Gallus gallus | 95.02 | 0.0 | 982 |
LLPS-Cas-1293 | Carlito syrichta | 94.92 | 0.0 | 992 |
LLPS-Scm-2989 | Scophthalmus maximus | 94.87 | 0.0 | 965 |
LLPS-Orl-1718 | Oryzias latipes | 94.66 | 0.0 | 962 |
LLPS-Anc-2233 | Anolis carolinensis | 94.52 | 0.0 | 993 |
LLPS-Scf-3511 | Scleropages formosus | 94.3 | 0.0 | 967 |
LLPS-Sah-2859 | Sarcophilus harrisii | 94.19 | 0.0 | 994 |
LLPS-Gaa-2459 | Gasterosteus aculeatus | 94.08 | 0.0 | 959 |
LLPS-Ten-1517 | Tetraodon nigroviridis | 93.7 | 0.0 | 964 |
LLPS-Leo-3571 | Lepisosteus oculatus | 93.51 | 0.0 | 964 |
LLPS-Asm-3140 | Astyanax mexicanus | 93.14 | 0.0 | 984 |
LLPS-Icp-0050 | Ictalurus punctatus | 92.75 | 0.0 | 984 |
LLPS-Xet-0505 | Xenopus tropicalis | 92.59 | 0.0 | 973 |
LLPS-Mod-1379 | Monodelphis domestica | 92.5 | 0.0 | 983 |
LLPS-Dar-2660 | Danio rerio | 92.35 | 0.0 | 981 |
LLPS-Tag-2699 | Taeniopygia guttata | 91.49 | 0.0 | 939 |
LLPS-Drm-1902 | Drosophila melanogaster | 90.85 | 0.0 | 900 |
LLPS-Orn-3098 | Oreochromis niloticus | 90.21 | 0.0 | 972 |
LLPS-Xim-2015 | Xiphophorus maculatus | 89.54 | 0.0 | 974 |
LLPS-Poa-3188 | Pongo abelii | 87.37 | 0.0 | 902 |
LLPS-Cii-1004 | Ciona intestinalis | 86.75 | 0.0 | 877 |
LLPS-Tar-3241 | Takifugu rubripes | 86.42 | 0.0 | 960 |
LLPS-Tut-0145 | Tursiops truncatus | 86.38 | 0.0 | 892 |
LLPS-Lac-4094 | Latimeria chalumnae | 84.8 | 0.0 | 877 |
LLPS-Cae-0867 | Caenorhabditis elegans | 84.63 | 0.0 | 855 |
LLPS-Abg-1815 | Absidia glauca | 81.34 | 0.0 | 818 |
LLPS-Sac-0166 | Saccharomyces cerevisiae | 80.89 | 0.0 | 796 |
LLPS-Kop-0473 | Komagataella pastoris | 80.38 | 0.0 | 793 |
LLPS-Nef-1035 | Neosartorya fischeri | 80.21 | 0.0 | 787 |
LLPS-Tum-1392 | Tuber melanosporum | 80.07 | 6e-165 | 477 |
LLPS-Asc-1278 | Aspergillus clavatus | 80.0 | 0.0 | 785 |
LLPS-Asfu-0198 | Aspergillus fumigatus | 80.0 | 0.0 | 787 |
LLPS-Orb-0418 | Oryza barthii | 79.53 | 0.0 | 776 |
LLPS-Mua-0583 | Musa acuminata | 79.53 | 0.0 | 775 |
LLPS-Orni-0593 | Oryza nivara | 79.53 | 0.0 | 776 |
LLPS-Orgl-1994 | Oryza glumaepatula | 79.53 | 0.0 | 776 |
LLPS-Orp-0982 | Oryza punctata | 79.53 | 0.0 | 779 |
LLPS-Orr-1206 | Oryza rufipogon | 79.53 | 0.0 | 776 |
LLPS-Orm-0629 | Oryza meridionalis | 79.53 | 0.0 | 778 |
LLPS-Brr-0883 | Brassica rapa | 79.49 | 0.0 | 775 |
LLPS-Thc-2174 | Theobroma cacao | 79.44 | 0.0 | 778 |
LLPS-Brd-0890 | Brachypodium distachyon | 79.44 | 0.0 | 773 |
LLPS-Gor-0850 | Gossypium raimondii | 79.32 | 0.0 | 774 |
LLPS-Tra-1736 | Triticum aestivum | 79.27 | 0.0 | 770 |
LLPS-Hov-1094 | Hordeum vulgare | 79.27 | 0.0 | 770 |
LLPS-Aso-0044 | Aspergillus oryzae | 79.15 | 0.0 | 782 |
LLPS-Cus-2348 | Cucumis sativus | 79.15 | 0.0 | 770 |
LLPS-Asf-1531 | Aspergillus flavus | 79.15 | 0.0 | 782 |
LLPS-Art-2122 | Arabidopsis thaliana | 79.1 | 0.0 | 776 |
LLPS-Tru-0007 | Triticum urartu | 79.1 | 0.0 | 767 |
LLPS-Orbr-0882 | Oryza brachyantha | 79.06 | 0.0 | 773 |
LLPS-Ors-0418 | Oryza sativa | 79.01 | 0.0 | 771 |
LLPS-Org-1172 | Oryza glaberrima | 79.01 | 0.0 | 771 |
LLPS-Asni-1407 | Aspergillus niger | 78.94 | 0.0 | 781 |
LLPS-Arl-1098 | Arabidopsis lyrata | 78.94 | 0.0 | 775 |
LLPS-Pot-0278 | Populus trichocarpa | 78.94 | 0.0 | 767 |
LLPS-Pyt-1461 | Pyrenophora teres | 78.92 | 0.0 | 767 |
LLPS-Lem-1419 | Leptosphaeria maculans | 78.92 | 0.0 | 767 |
LLPS-Pytr-0094 | Pyrenophora triticirepentis | 78.92 | 0.0 | 767 |
LLPS-Coc-1378 | Corchorus capsularis | 78.89 | 0.0 | 768 |
LLPS-Sol-1172 | Solanum lycopersicum | 78.85 | 0.0 | 769 |
LLPS-Bro-0389 | Brassica oleracea | 78.85 | 0.0 | 773 |
LLPS-Zem-1758 | Zea mays | 78.85 | 0.0 | 771 |
LLPS-Ori-0148 | Oryza indica | 78.8 | 0.0 | 768 |
LLPS-Lep-1142 | Leersia perrieri | 78.8 | 0.0 | 769 |
LLPS-Asg-0497 | Ashbya gossypii | 78.76 | 0.0 | 773 |
LLPS-Php-0498 | Physcomitrella patens | 78.74 | 0.0 | 775 |
LLPS-Glm-2869 | Glycine max | 78.72 | 0.0 | 768 |
LLPS-Mae-0181 | Manihot esculenta | 78.72 | 0.0 | 771 |
LLPS-Scj-0166 | Schizosaccharomyces japonicus | 78.71 | 0.0 | 791 |
LLPS-Brn-1573 | Brassica napus | 78.63 | 0.0 | 772 |
LLPS-Sob-0084 | Sorghum bicolor | 78.63 | 0.0 | 770 |
LLPS-Phv-1359 | Phaseolus vulgaris | 78.56 | 0.0 | 770 |
LLPS-Via-1196 | Vigna angularis | 78.51 | 0.0 | 768 |
LLPS-Sot-1916 | Solanum tuberosum | 78.51 | 0.0 | 769 |
LLPS-Amt-1794 | Amborella trichopoda | 78.51 | 0.0 | 768 |
LLPS-Hea-1899 | Helianthus annuus | 78.46 | 0.0 | 767 |
LLPS-Vir-0629 | Vigna radiata | 78.46 | 0.0 | 764 |
LLPS-Ast-0623 | Aspergillus terreus | 78.44 | 0.0 | 774 |
LLPS-Met-2515 | Medicago truncatula | 78.34 | 0.0 | 767 |
LLPS-Nia-2514 | Nicotiana attenuata | 78.3 | 0.0 | 767 |
LLPS-Sei-0162 | Setaria italica | 78.21 | 0.0 | 765 |
LLPS-Cis-0746 | Ciona savignyi | 78.17 | 0.0 | 842 |
LLPS-Yal-0687 | Yarrowia lipolytica | 78.11 | 0.0 | 783 |
LLPS-Viv-0497 | Vitis vinifera | 78.09 | 0.0 | 769 |
LLPS-Chc-1122 | Chondrus crispus | 77.87 | 0.0 | 777 |
LLPS-Prp-1615 | Prunus persica | 77.75 | 0.0 | 768 |
LLPS-Fus-1503 | Fusarium solani | 77.73 | 0.0 | 768 |
LLPS-Nec-0531 | Neurospora crassa | 77.66 | 0.0 | 768 |
LLPS-Mel-0739 | Melampsora laricipopulina | 77.64 | 0.0 | 786 |
LLPS-Coo-1305 | Colletotrichum orbiculare | 77.56 | 0.0 | 756 |
LLPS-Cogr-0861 | Colletotrichum graminicola | 77.56 | 0.0 | 755 |
LLPS-Scp-0304 | Schizosaccharomyces pombe | 77.5 | 0.0 | 786 |
LLPS-Cog-0603 | Colletotrichum gloeosporioides | 77.35 | 0.0 | 756 |
LLPS-Sem-1346 | Selaginella moellendorffii | 77.31 | 0.0 | 766 |
LLPS-Put-0254 | Puccinia triticina | 77.25 | 0.0 | 785 |
LLPS-Asn-1519 | Aspergillus nidulans | 77.23 | 0.0 | 762 |
LLPS-Crn-1192 | Cryptococcus neoformans | 77.18 | 0.0 | 773 |
LLPS-Mao-0634 | Magnaporthe oryzae | 77.14 | 0.0 | 772 |
LLPS-Trr-0639 | Trichoderma reesei | 77.05 | 0.0 | 754 |
LLPS-Trv-1395 | Trichoderma virens | 77.05 | 0.0 | 755 |
LLPS-Phn-1016 | Phaeosphaeria nodorum | 77.02 | 0.0 | 760 |
LLPS-Fuv-0875 | Fusarium verticillioides | 76.95 | 0.0 | 771 |
LLPS-Fuo-0249 | Fusarium oxysporum | 76.95 | 0.0 | 771 |
LLPS-Pug-0785 | Puccinia graminis | 76.84 | 0.0 | 783 |
LLPS-Zyt-1452 | Zymoseptoria tritici | 76.71 | 0.0 | 759 |
LLPS-Ved-0674 | Verticillium dahliae | 76.42 | 0.0 | 755 |
LLPS-Scc-1218 | Schizosaccharomyces cryophilus | 76.3 | 0.0 | 775 |
LLPS-Beb-0185 | Beauveria bassiana | 76.21 | 0.0 | 756 |
LLPS-Chr-0732 | Chlamydomonas reinhardtii | 76.19 | 0.0 | 766 |
LLPS-Osl-1355 | Ostreococcus lucimarinus | 76.16 | 0.0 | 750 |
LLPS-Usm-0240 | Ustilago maydis | 75.83 | 0.0 | 770 |
LLPS-Dos-0823 | Dothistroma septosporum | 75.79 | 0.0 | 751 |
LLPS-Gag-1410 | Gaeumannomyces graminis | 75.71 | 0.0 | 766 |
LLPS-Blg-0239 | Blumeria graminis | 75.62 | 0.0 | 751 |
LLPS-Spr-1069 | Sporisorium reilianum | 75.62 | 0.0 | 770 |
LLPS-Map-0324 | Magnaporthe poae | 75.51 | 0.0 | 764 |
LLPS-Dac-0781 | Daucus carota | 74.89 | 0.0 | 724 |
LLPS-Gas-0047 | Galdieria sulphuraria | 74.85 | 1e-168 | 488 |
LLPS-Miv-1122 | Microbotryum violaceum | 73.57 | 0.0 | 767 |
LLPS-Cym-1146 | Cyanidioschyzon merolae | 70.24 | 0.0 | 690 |