LLPS-Mum-3839
Eef1d

▼ OVERVIEW


Status: Reviewed
Protein Name: Elongation factor 1-delta
Gene Name: Eef1d
Ensembl Gene: ENSMUSG00000055762.16
Ensembl Protein: ENSMUSP00000123388.1
Organism: Mus musculus
Taxa ID: 10090
LLPS Type: Others


▼ PROPERTY



——— Disorder propensity (calculated by IUPred2A)

▼ Classification


Condensates:
CondensateDescriptionTissue/CellPMIDs
Postsynaptic density
"...We report the first direct comparison of the proteome of triplicate isolates of mouse and human cortical postsynaptic densities. The mouse postsynaptic density comprised 1556 proteins and the human one 1461."
Mouse cortex23071613
NucleolusPredicted from orthologsN/A(View)

▼ FUNCTION


Isoform 1: EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP, regenerating EF-1-alpha for another round of transfer of aminoacyl-tRNAs to the ribosome.

▼ SEQUENCE


Protein Sequence (FASTA)
1     MRSGKASCAL  ETVWEDRHKY  EGAERRFHEQ  EATQVVAAAA  TAAATASASV  QQLLDEVPAV  60
61    NGPSQEDTED  TEEAEAPNTS  SRSDPGKSHE  CKKPIQKKRK  RSPKSWLGQA  DLALVGLSAD  120
121   HVWLDKPLFD  QAESSYRQRL  ADVAAQAAQP  PALAPRGPCT  HGSHVACHHV  TWGIWVNKSC  180
181   FDQAERAFVE  WSQSLLLAAE  GSHRQGTPDT  GQQAVTPDLA  LACQPCPPAN  GQPPLGSLQA  240
241   LVREVWLEKP  RYDAAERGFY  EALFDGHPPG  KVRLQERASQ  AEGTRRGRRD  HRSCNNVGNK  300
301   RAGSKRANGE  APPAFPYWYF  LHKDAEAPWL  SKPTYDSAEC  RHHAVEALRI  AWRLEAASLA  360
361   HRPTPRSGPS  MSSLRPNRKM  ATNFLAHEKI  WFDKFKYDDA  ERRFYEQMNG  PVTSGSRQEN  420
421   GASVILRDIA  RARENIQKSL  AGSSGPGASS  GPGGDHSELI  VRITSLEVEN  QNLRGVVQDL  480
481   QQAISKLEAR  LSSLEKSSPT  PRATAPQTQH  VSPMRQVEPP  TKKGATPAED  DEDKDIDLFG  540
541   SDEEEEDKEA  ARLREERLRQ  YAEKKAKKPT  LVAKSSILLD  VKPWDDETDM  AQLETCVRSI  600
601   QLDGLVWGAS  KLVPVGYGIR  KLQIQCVVED  DKVGTDLLEE  EITKFEEHVQ  SVDIAAFNKI  660
Nucleotide CDS Sequence (FASTA)
1     ATGGCTACAA  ACTTTCTAGC  GCATGAGAAG  ATCTGGTTTG  ACAAGTTTAA  ATATGATGAT  60
61    GCAGAAAGGA  GATTCTATGA  GCAGATGAAC  GGGCCTGTGA  CCTCCGGCTC  CCGCCAGGAG  120
121   AATGGTGCCA  GCGTGATCCT  CCGAGACATT  GCAAGAGCCA  GAGAGAACAT  CCAGAAATCC  180
181   TTGGCTGGAA  GCTCAGGCCC  TGGAGCCTCC  AGTGGACCTG  GTGGAGACCA  CAGTGAGCTC  240
241   ATTGTGAGGA  TTACCAGTCT  GGAAGTGGAG  AACCAGAACC  TTCGAGGCGT  GGTGCAAGAT  300
301   TTGCAGCAGG  CCATTTCCAA  GTTGGAGGCC  CGGCTGAGCT  CTCTAGAGAA  GAGTTCACCT  360
361   ACTCCCCGAG  CCACGGCCCC  ACAGACCCAA  CATGTCTCTC  CTATGCGTCA  AGTGGAGCCC  420
421   CCAACCAAGA  AAGGAGCCAC  ACCAGCAGAG  GACGATGAGG  ACAAGGACAT  TGACCTGTTC  480
481   GGCAGTGACG  AGGAGGAAGA  AGATAAGGAG  GCTGCCCGAC  TACGGGAGGA  GAGGCTACGC  540
541   CAGTACGCAG  AGAAGAAGGC  CAAGAAGCCC  ACACTGGTGG  CCAAATCCTC  CATCCTTTTG  600
601   GATGTTAAAC  CTTGGGATGA  TGAGACTGAC  ATGGCCCAGC  TAGAGACTTG  TGTGCGTTCC  660
661   ATCCAATTGG  ACGGGCTGGT  TTGGGGGGCC  TCCAAGCTTG  TGCCTGTTGG  CTATGGCATC  720
721   CGGAAGCTGC  AGATC  735

▼ KEYWORD


ID
Family
Acetylation
Alternative splicing
Complete proteome
Direct protein sequencing
DNA-binding
Elongation factor
Nucleus
Phosphoprotein
Protein biosynthesis
Reference proteome
Transcription
Transcription regulation

▼ GENE ONTOLOGY


ID
Classification
Description
Cellular Component
Cytoplasm
Cellular Component
Cytosol
Cellular Component
Eukaryotic translation elongation factor 1 complex
Cellular Component
Fibrillar center
Cellular Component
Glutamatergic synapse
Cellular Component
Nucleus
Cellular Component
Synapse
Molecular Function
Activating transcription factor binding
Molecular Function
DNA binding
Molecular Function
Guanyl-nucleotide exchange factor activity
Molecular Function
Heat shock protein binding
Molecular Function
Translation elongation factor activity
Biological Process
Cellular response to ionizing radiation
Biological Process
MRNA transcription
Biological Process
Regulation of cell death
Biological Process
Translational elongation

▼ KEGG



▼ ORTHOLOGY


DrLLPS IDOrganismIdentityE-valueScore
LLPS-Mal-4400Mandrillus leucophaeus98.79e-41 161
LLPS-Mea-1660Mesocricetus auratus93.22e-105 327
LLPS-Ran-0943Rattus norvegicus92.890.01084
LLPS-Ova-3815Ovis aries89.681e-144 429
LLPS-Fud-2773Fukomys damarensis87.944e-153 451
LLPS-Nol-1291Nomascus leucogenys87.780.0 748
LLPS-Cas-1028Carlito syrichta86.210.0 973
LLPS-Rhb-0522Rhinopithecus bieti85.151e-51 183
LLPS-Otg-1303Otolemur garnettii85.154e-51 182
LLPS-Man-1438Macaca nemestrina85.151e-51 183
LLPS-Poa-3640Pongo abelii85.151e-51 183
LLPS-Cap-2903Cavia porcellus85.157e-51 181
LLPS-Caj-1410Callithrix jacchus85.152e-51 182
LLPS-Cea-1917Cercocebus atys85.151e-51 183
LLPS-Aon-3493Aotus nancymaae85.152e-51 183
LLPS-Maf-1884Macaca fascicularis85.151e-51 183
LLPS-Paa-2650Papio anubis85.151e-51 183
LLPS-Myl-0101Myotis lucifugus85.151e-51 184
LLPS-Aim-2735Ailuropoda melanoleuca84.90.0 848
LLPS-Orn-0581Oreochromis niloticus84.888e-43 159
LLPS-Orl-2833Oryzias latipes84.887e-43 157
LLPS-Lac-1318Latimeria chalumnae84.169e-52 184
LLPS-Eqc-0836Equus caballus83.790.0 947
LLPS-Dio-3500Dipodomys ordii83.790.0 985
LLPS-Mam-2267Macaca mulatta83.360.0 914
LLPS-Hos-1620Homo sapiens83.330.0 923
LLPS-Pap-0687Pan paniscus83.330.0 929
LLPS-Fia-2469Ficedula albicollis83.171e-50 181
LLPS-Meg-0580Meleagris gallopavo83.171e-50 181
LLPS-Tag-2006Taeniopygia guttata83.172e-50 180
LLPS-Gaga-1441Gallus gallus83.171e-50 181
LLPS-Ten-1014Tetraodon nigroviridis83.178e-46 169
LLPS-Pat-1600Pan troglodytes83.030.0 925
LLPS-Chs-3781Chlorocebus sabaeus82.580.0 903
LLPS-Pof-3998Poecilia formosa82.561e-41 155
LLPS-Xim-2475Xiphophorus maculatus82.567e-42 156
LLPS-Ict-2359Ictidomys tridecemlineatus82.50.0 966
LLPS-Pes-0522Pelodiscus sinensis82.181e-50 179
LLPS-Scm-0478Scophthalmus maximus82.189e-50 178
LLPS-Sah-2381Sarcophilus harrisii82.183e-50 179
LLPS-Gog-4301Gorilla gorilla82.150.0 900
LLPS-Anc-1702Anolis carolinensis82.118e-51 181
LLPS-Fec-4409Felis catus81.520.0 905
LLPS-Scf-0064Scleropages formosus81.522e-45 166
LLPS-Anp-0417Anas platyrhynchos81.39e-51 180
LLPS-Mod-1107Monodelphis domestica81.35e-50 179
LLPS-Bot-1584Bos taurus81.210.0 913
LLPS-Tar-0115Takifugu rubripes81.193e-50 179
LLPS-Xet-1215Xenopus tropicalis80.498e-51 181
LLPS-Caf-3776Canis familiaris80.450.0 886
LLPS-Gaa-0483Gasterosteus aculeatus80.27e-49 176
LLPS-Loa-3777Loxodonta africana78.920.0 918
LLPS-Mup-1938Mustela putorius furo78.790.0 884
LLPS-Urm-1860Ursus maritimus77.931e-50 181
LLPS-Sus-1373Sus scrofa77.937e-52 184
LLPS-Tut-0749Tursiops truncatus77.937e-52 184
LLPS-Orc-1207Oryctolagus cuniculus77.786e-51 182
LLPS-Cis-0810Ciona savignyi76.671e-40 152
LLPS-Drm-0403Drosophila melanogaster75.566e-40 150
LLPS-Icp-0913Ictalurus punctatus73.64e-48 174
LLPS-Cii-0595Ciona intestinalis69.63e-38 146
LLPS-Mae-1926Manihot esculenta68.132e-30 124
LLPS-Cae-0678Caenorhabditis elegans67.782e-32 130
LLPS-Ved-1335Verticillium dahliae67.653e-35 137
LLPS-Nia-0629Nicotiana attenuata67.034e-29 120
LLPS-Beb-0457Beauveria bassiana66.675e-36 140
LLPS-Zem-1290Zea mays66.672e-29 122
LLPS-Map-0898Magnaporthe poae66.421e-35 139
LLPS-Miv-1561Microbotryum violaceum66.41e-40 153
LLPS-Phv-1691Phaseolus vulgaris65.932e-29 121
LLPS-Orbr-0664Oryza brachyantha65.931e-29 122
LLPS-Viv-1386Vitis vinifera65.936e-29 120
LLPS-Glm-2878Glycine max65.931e-29 122
LLPS-Asm-0297Astyanax mexicanus65.683e-50 179
LLPS-Sob-0009Sorghum bicolor65.562e-29 121
LLPS-Trr-0600Trichoderma reesei65.046e-28 117
LLPS-Brr-2175Brassica rapa64.843e-30 124
LLPS-Gor-0076Gossypium raimondii64.848e-29 121
LLPS-Bro-1794Brassica oleracea64.844e-30 124
LLPS-Brn-2412Brassica napus64.843e-30 124
LLPS-Gag-0577Gaeumannomyces graminis64.848e-37 142
LLPS-Sol-0520Solanum lycopersicum64.844e-30 123
LLPS-Arl-2048Arabidopsis lyrata64.847e-30 123
LLPS-Vir-0859Vigna radiata64.848e-29 119
LLPS-Met-1529Medicago truncatula64.849e-29 120
LLPS-Cus-0290Cucumis sativus64.845e-30 123
LLPS-Amt-1019Amborella trichopoda63.745e-28 118
LLPS-Art-0327Arabidopsis thaliana63.746e-30 123
LLPS-Lep-0333Leersia perrieri63.747e-29 120
LLPS-Sot-0669Solanum tuberosum63.743e-29 121
LLPS-Hea-0453Helianthus annuus63.336e-28 117
LLPS-Brd-1013Brachypodium distachyon63.338e-29 119
LLPS-Ors-2149Oryza sativa62.643e-28 118
LLPS-Tru-0167Triticum urartu62.646e-29 122
LLPS-Tra-0099Triticum aestivum62.642e-28 118
LLPS-Put-1206Puccinia triticina62.63e-38 145
LLPS-Zyt-0924Zymoseptoria tritici62.55e-28 117
LLPS-Mao-0199Magnaporthe oryzae61.944e-32 129
LLPS-Pug-0049Puccinia graminis61.93e-39 149
LLPS-Orp-1525Oryza punctata61.545e-28 117
LLPS-Ori-0228Oryza indica61.544e-28 118
LLPS-Hov-1569Hordeum vulgare60.446e-28 117
LLPS-Dac-0117Daucus carota60.24e-28 117
LLPS-Tum-0840Tuber melanosporum60.162e-32 130
LLPS-Cym-0082Cyanidioschyzon merolae60.03e-31 126
LLPS-Gas-0546Galdieria sulphuraria60.03e-32 130
LLPS-Scp-0230Schizosaccharomyces pombe60.02e-30 124
LLPS-Pyt-0004Pyrenophora teres59.357e-28 117
LLPS-Php-1586Physcomitrella patens59.182e-28 119
LLPS-Asni-0196Aspergillus niger58.465e-32 130
LLPS-Ast-0074Aspergillus terreus58.336e-37 142
LLPS-Usm-0363Ustilago maydis58.255e-28 117
LLPS-Nec-0430Neurospora crassa57.597e-32 128
LLPS-Fus-0937Fusarium solani57.435e-31 126
LLPS-Dar-2673Danio rerio57.142e-79 261
LLPS-Abg-1376Absidia glauca57.142e-35 137
LLPS-Crn-0007Cryptococcus neoformans56.723e-30 124
LLPS-Cogr-0968Colletotrichum graminicola55.884e-38 145
LLPS-Mel-0762Melampsora laricipopulina55.562e-30 124
LLPS-Blg-0035Blumeria graminis55.422e-38 146
LLPS-Lem-0434Leptosphaeria maculans55.327e-30 123
LLPS-Aso-1414Aspergillus oryzae55.176e-30 123
LLPS-Scc-0285Schizosaccharomyces cryophilus55.041e-33 133
LLPS-Coo-0434Colletotrichum orbiculare54.712e-33 132
LLPS-Dos-0138Dothistroma septosporum54.194e-33 132
LLPS-Cog-0746Colletotrichum gloeosporioides53.534e-36 140
LLPS-Trv-0532Trichoderma virens53.373e-30 124
LLPS-Fuo-0661Fusarium oxysporum53.373e-35 137
LLPS-Fuv-1229Fusarium verticillioides53.373e-35 137
LLPS-Asn-1526Aspergillus nidulans51.756e-30 123
LLPS-Prp-1121Prunus persica51.722e-29 122
LLPS-Ora-1914Ornithorhynchus anatinus46.818e-138 424
LLPS-Leo-0112Lepisosteus oculatus44.21e-130 407