LLPS-Mum-3839
Eef1d
▼ OVERVIEW
Status: | Reviewed |
Protein Name: | Elongation factor 1-delta |
Gene Name: | Eef1d |
Ensembl Gene: | ENSMUSG00000055762.16 |
Ensembl Protein: | ENSMUSP00000123388.1 |
Organism: | Mus musculus |
Taxa ID: | 10090 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Description | Tissue/Cell | PMIDs |
---|---|---|---|
Postsynaptic density | "...We report the first direct comparison of the proteome of triplicate isolates of mouse and human cortical postsynaptic densities. The mouse postsynaptic density comprised 1556 proteins and the human one 1461." | Mouse cortex | 23071613 |
Nucleolus | Predicted from orthologs | N/A | (View) |
▼ FUNCTION
Isoform 1: EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP, regenerating EF-1-alpha for another round of transfer of aminoacyl-tRNAs to the ribosome. |
▼ CROSS REFERENCE
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MRSGKASCAL ETVWEDRHKY EGAERRFHEQ EATQVVAAAA TAAATASASV QQLLDEVPAV 60 61 NGPSQEDTED TEEAEAPNTS SRSDPGKSHE CKKPIQKKRK RSPKSWLGQA DLALVGLSAD 120 121 HVWLDKPLFD QAESSYRQRL ADVAAQAAQP PALAPRGPCT HGSHVACHHV TWGIWVNKSC 180 181 FDQAERAFVE WSQSLLLAAE GSHRQGTPDT GQQAVTPDLA LACQPCPPAN GQPPLGSLQA 240 241 LVREVWLEKP RYDAAERGFY EALFDGHPPG KVRLQERASQ AEGTRRGRRD HRSCNNVGNK 300 301 RAGSKRANGE APPAFPYWYF LHKDAEAPWL SKPTYDSAEC RHHAVEALRI AWRLEAASLA 360 361 HRPTPRSGPS MSSLRPNRKM ATNFLAHEKI WFDKFKYDDA ERRFYEQMNG PVTSGSRQEN 420 421 GASVILRDIA RARENIQKSL AGSSGPGASS GPGGDHSELI VRITSLEVEN QNLRGVVQDL 480 481 QQAISKLEAR LSSLEKSSPT PRATAPQTQH VSPMRQVEPP TKKGATPAED DEDKDIDLFG 540 541 SDEEEEDKEA ARLREERLRQ YAEKKAKKPT LVAKSSILLD VKPWDDETDM AQLETCVRSI 600 601 QLDGLVWGAS KLVPVGYGIR KLQIQCVVED DKVGTDLLEE EITKFEEHVQ SVDIAAFNKI 660 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCTACAA ACTTTCTAGC GCATGAGAAG ATCTGGTTTG ACAAGTTTAA ATATGATGAT 60 61 GCAGAAAGGA GATTCTATGA GCAGATGAAC GGGCCTGTGA CCTCCGGCTC CCGCCAGGAG 120 121 AATGGTGCCA GCGTGATCCT CCGAGACATT GCAAGAGCCA GAGAGAACAT CCAGAAATCC 180 181 TTGGCTGGAA GCTCAGGCCC TGGAGCCTCC AGTGGACCTG GTGGAGACCA CAGTGAGCTC 240 241 ATTGTGAGGA TTACCAGTCT GGAAGTGGAG AACCAGAACC TTCGAGGCGT GGTGCAAGAT 300 301 TTGCAGCAGG CCATTTCCAA GTTGGAGGCC CGGCTGAGCT CTCTAGAGAA GAGTTCACCT 360 361 ACTCCCCGAG CCACGGCCCC ACAGACCCAA CATGTCTCTC CTATGCGTCA AGTGGAGCCC 420 421 CCAACCAAGA AAGGAGCCAC ACCAGCAGAG GACGATGAGG ACAAGGACAT TGACCTGTTC 480 481 GGCAGTGACG AGGAGGAAGA AGATAAGGAG GCTGCCCGAC TACGGGAGGA GAGGCTACGC 540 541 CAGTACGCAG AGAAGAAGGC CAAGAAGCCC ACACTGGTGG CCAAATCCTC CATCCTTTTG 600 601 GATGTTAAAC CTTGGGATGA TGAGACTGAC ATGGCCCAGC TAGAGACTTG TGTGCGTTCC 660 661 ATCCAATTGG ACGGGCTGGT TTGGGGGGCC TCCAAGCTTG TGCCTGTTGG CTATGGCATC 720 721 CGGAAGCTGC AGATC 735 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Cytoplasm | |
Cellular Component | Cytosol | |
Cellular Component | Eukaryotic translation elongation factor 1 complex | |
Cellular Component | Fibrillar center | |
Cellular Component | Glutamatergic synapse | |
Cellular Component | Nucleus | |
Cellular Component | Synapse | |
Molecular Function | Activating transcription factor binding | |
Molecular Function | DNA binding | |
Molecular Function | Guanyl-nucleotide exchange factor activity | |
Molecular Function | Heat shock protein binding | |
Molecular Function | Translation elongation factor activity | |
Biological Process | Cellular response to ionizing radiation | |
Biological Process | MRNA transcription | |
Biological Process | Regulation of cell death | |
Biological Process | Translational elongation |
▼ ANNOTATION
Mutation | ||||
CGAP |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Function | ||||
RaftProt |
Localization | ||||
COMPARTMENTS |
Expression | ||||
ArrayExpress | TISSUES |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Mal-4400 | Mandrillus leucophaeus | 98.7 | 9e-41 | 161 |
LLPS-Mea-1660 | Mesocricetus auratus | 93.2 | 2e-105 | 327 |
LLPS-Ran-0943 | Rattus norvegicus | 92.89 | 0.0 | 1084 |
LLPS-Ova-3815 | Ovis aries | 89.68 | 1e-144 | 429 |
LLPS-Fud-2773 | Fukomys damarensis | 87.94 | 4e-153 | 451 |
LLPS-Nol-1291 | Nomascus leucogenys | 87.78 | 0.0 | 748 |
LLPS-Cas-1028 | Carlito syrichta | 86.21 | 0.0 | 973 |
LLPS-Rhb-0522 | Rhinopithecus bieti | 85.15 | 1e-51 | 183 |
LLPS-Otg-1303 | Otolemur garnettii | 85.15 | 4e-51 | 182 |
LLPS-Man-1438 | Macaca nemestrina | 85.15 | 1e-51 | 183 |
LLPS-Poa-3640 | Pongo abelii | 85.15 | 1e-51 | 183 |
LLPS-Cap-2903 | Cavia porcellus | 85.15 | 7e-51 | 181 |
LLPS-Caj-1410 | Callithrix jacchus | 85.15 | 2e-51 | 182 |
LLPS-Cea-1917 | Cercocebus atys | 85.15 | 1e-51 | 183 |
LLPS-Aon-3493 | Aotus nancymaae | 85.15 | 2e-51 | 183 |
LLPS-Maf-1884 | Macaca fascicularis | 85.15 | 1e-51 | 183 |
LLPS-Paa-2650 | Papio anubis | 85.15 | 1e-51 | 183 |
LLPS-Myl-0101 | Myotis lucifugus | 85.15 | 1e-51 | 184 |
LLPS-Aim-2735 | Ailuropoda melanoleuca | 84.9 | 0.0 | 848 |
LLPS-Orn-0581 | Oreochromis niloticus | 84.88 | 8e-43 | 159 |
LLPS-Orl-2833 | Oryzias latipes | 84.88 | 7e-43 | 157 |
LLPS-Lac-1318 | Latimeria chalumnae | 84.16 | 9e-52 | 184 |
LLPS-Eqc-0836 | Equus caballus | 83.79 | 0.0 | 947 |
LLPS-Dio-3500 | Dipodomys ordii | 83.79 | 0.0 | 985 |
LLPS-Mam-2267 | Macaca mulatta | 83.36 | 0.0 | 914 |
LLPS-Hos-1620 | Homo sapiens | 83.33 | 0.0 | 923 |
LLPS-Pap-0687 | Pan paniscus | 83.33 | 0.0 | 929 |
LLPS-Fia-2469 | Ficedula albicollis | 83.17 | 1e-50 | 181 |
LLPS-Meg-0580 | Meleagris gallopavo | 83.17 | 1e-50 | 181 |
LLPS-Tag-2006 | Taeniopygia guttata | 83.17 | 2e-50 | 180 |
LLPS-Gaga-1441 | Gallus gallus | 83.17 | 1e-50 | 181 |
LLPS-Ten-1014 | Tetraodon nigroviridis | 83.17 | 8e-46 | 169 |
LLPS-Pat-1600 | Pan troglodytes | 83.03 | 0.0 | 925 |
LLPS-Chs-3781 | Chlorocebus sabaeus | 82.58 | 0.0 | 903 |
LLPS-Pof-3998 | Poecilia formosa | 82.56 | 1e-41 | 155 |
LLPS-Xim-2475 | Xiphophorus maculatus | 82.56 | 7e-42 | 156 |
LLPS-Ict-2359 | Ictidomys tridecemlineatus | 82.5 | 0.0 | 966 |
LLPS-Pes-0522 | Pelodiscus sinensis | 82.18 | 1e-50 | 179 |
LLPS-Scm-0478 | Scophthalmus maximus | 82.18 | 9e-50 | 178 |
LLPS-Sah-2381 | Sarcophilus harrisii | 82.18 | 3e-50 | 179 |
LLPS-Gog-4301 | Gorilla gorilla | 82.15 | 0.0 | 900 |
LLPS-Anc-1702 | Anolis carolinensis | 82.11 | 8e-51 | 181 |
LLPS-Fec-4409 | Felis catus | 81.52 | 0.0 | 905 |
LLPS-Scf-0064 | Scleropages formosus | 81.52 | 2e-45 | 166 |
LLPS-Anp-0417 | Anas platyrhynchos | 81.3 | 9e-51 | 180 |
LLPS-Mod-1107 | Monodelphis domestica | 81.3 | 5e-50 | 179 |
LLPS-Bot-1584 | Bos taurus | 81.21 | 0.0 | 913 |
LLPS-Tar-0115 | Takifugu rubripes | 81.19 | 3e-50 | 179 |
LLPS-Xet-1215 | Xenopus tropicalis | 80.49 | 8e-51 | 181 |
LLPS-Caf-3776 | Canis familiaris | 80.45 | 0.0 | 886 |
LLPS-Gaa-0483 | Gasterosteus aculeatus | 80.2 | 7e-49 | 176 |
LLPS-Loa-3777 | Loxodonta africana | 78.92 | 0.0 | 918 |
LLPS-Mup-1938 | Mustela putorius furo | 78.79 | 0.0 | 884 |
LLPS-Urm-1860 | Ursus maritimus | 77.93 | 1e-50 | 181 |
LLPS-Sus-1373 | Sus scrofa | 77.93 | 7e-52 | 184 |
LLPS-Tut-0749 | Tursiops truncatus | 77.93 | 7e-52 | 184 |
LLPS-Orc-1207 | Oryctolagus cuniculus | 77.78 | 6e-51 | 182 |
LLPS-Cis-0810 | Ciona savignyi | 76.67 | 1e-40 | 152 |
LLPS-Drm-0403 | Drosophila melanogaster | 75.56 | 6e-40 | 150 |
LLPS-Icp-0913 | Ictalurus punctatus | 73.6 | 4e-48 | 174 |
LLPS-Cii-0595 | Ciona intestinalis | 69.6 | 3e-38 | 146 |
LLPS-Mae-1926 | Manihot esculenta | 68.13 | 2e-30 | 124 |
LLPS-Cae-0678 | Caenorhabditis elegans | 67.78 | 2e-32 | 130 |
LLPS-Ved-1335 | Verticillium dahliae | 67.65 | 3e-35 | 137 |
LLPS-Nia-0629 | Nicotiana attenuata | 67.03 | 4e-29 | 120 |
LLPS-Beb-0457 | Beauveria bassiana | 66.67 | 5e-36 | 140 |
LLPS-Zem-1290 | Zea mays | 66.67 | 2e-29 | 122 |
LLPS-Map-0898 | Magnaporthe poae | 66.42 | 1e-35 | 139 |
LLPS-Miv-1561 | Microbotryum violaceum | 66.4 | 1e-40 | 153 |
LLPS-Phv-1691 | Phaseolus vulgaris | 65.93 | 2e-29 | 121 |
LLPS-Orbr-0664 | Oryza brachyantha | 65.93 | 1e-29 | 122 |
LLPS-Viv-1386 | Vitis vinifera | 65.93 | 6e-29 | 120 |
LLPS-Glm-2878 | Glycine max | 65.93 | 1e-29 | 122 |
LLPS-Asm-0297 | Astyanax mexicanus | 65.68 | 3e-50 | 179 |
LLPS-Sob-0009 | Sorghum bicolor | 65.56 | 2e-29 | 121 |
LLPS-Trr-0600 | Trichoderma reesei | 65.04 | 6e-28 | 117 |
LLPS-Brr-2175 | Brassica rapa | 64.84 | 3e-30 | 124 |
LLPS-Gor-0076 | Gossypium raimondii | 64.84 | 8e-29 | 121 |
LLPS-Bro-1794 | Brassica oleracea | 64.84 | 4e-30 | 124 |
LLPS-Brn-2412 | Brassica napus | 64.84 | 3e-30 | 124 |
LLPS-Gag-0577 | Gaeumannomyces graminis | 64.84 | 8e-37 | 142 |
LLPS-Sol-0520 | Solanum lycopersicum | 64.84 | 4e-30 | 123 |
LLPS-Arl-2048 | Arabidopsis lyrata | 64.84 | 7e-30 | 123 |
LLPS-Vir-0859 | Vigna radiata | 64.84 | 8e-29 | 119 |
LLPS-Met-1529 | Medicago truncatula | 64.84 | 9e-29 | 120 |
LLPS-Cus-0290 | Cucumis sativus | 64.84 | 5e-30 | 123 |
LLPS-Amt-1019 | Amborella trichopoda | 63.74 | 5e-28 | 118 |
LLPS-Art-0327 | Arabidopsis thaliana | 63.74 | 6e-30 | 123 |
LLPS-Lep-0333 | Leersia perrieri | 63.74 | 7e-29 | 120 |
LLPS-Sot-0669 | Solanum tuberosum | 63.74 | 3e-29 | 121 |
LLPS-Hea-0453 | Helianthus annuus | 63.33 | 6e-28 | 117 |
LLPS-Brd-1013 | Brachypodium distachyon | 63.33 | 8e-29 | 119 |
LLPS-Ors-2149 | Oryza sativa | 62.64 | 3e-28 | 118 |
LLPS-Tru-0167 | Triticum urartu | 62.64 | 6e-29 | 122 |
LLPS-Tra-0099 | Triticum aestivum | 62.64 | 2e-28 | 118 |
LLPS-Put-1206 | Puccinia triticina | 62.6 | 3e-38 | 145 |
LLPS-Zyt-0924 | Zymoseptoria tritici | 62.5 | 5e-28 | 117 |
LLPS-Mao-0199 | Magnaporthe oryzae | 61.94 | 4e-32 | 129 |
LLPS-Pug-0049 | Puccinia graminis | 61.9 | 3e-39 | 149 |
LLPS-Orp-1525 | Oryza punctata | 61.54 | 5e-28 | 117 |
LLPS-Ori-0228 | Oryza indica | 61.54 | 4e-28 | 118 |
LLPS-Hov-1569 | Hordeum vulgare | 60.44 | 6e-28 | 117 |
LLPS-Dac-0117 | Daucus carota | 60.2 | 4e-28 | 117 |
LLPS-Tum-0840 | Tuber melanosporum | 60.16 | 2e-32 | 130 |
LLPS-Cym-0082 | Cyanidioschyzon merolae | 60.0 | 3e-31 | 126 |
LLPS-Gas-0546 | Galdieria sulphuraria | 60.0 | 3e-32 | 130 |
LLPS-Scp-0230 | Schizosaccharomyces pombe | 60.0 | 2e-30 | 124 |
LLPS-Pyt-0004 | Pyrenophora teres | 59.35 | 7e-28 | 117 |
LLPS-Php-1586 | Physcomitrella patens | 59.18 | 2e-28 | 119 |
LLPS-Asni-0196 | Aspergillus niger | 58.46 | 5e-32 | 130 |
LLPS-Ast-0074 | Aspergillus terreus | 58.33 | 6e-37 | 142 |
LLPS-Usm-0363 | Ustilago maydis | 58.25 | 5e-28 | 117 |
LLPS-Nec-0430 | Neurospora crassa | 57.59 | 7e-32 | 128 |
LLPS-Fus-0937 | Fusarium solani | 57.43 | 5e-31 | 126 |
LLPS-Dar-2673 | Danio rerio | 57.14 | 2e-79 | 261 |
LLPS-Abg-1376 | Absidia glauca | 57.14 | 2e-35 | 137 |
LLPS-Crn-0007 | Cryptococcus neoformans | 56.72 | 3e-30 | 124 |
LLPS-Cogr-0968 | Colletotrichum graminicola | 55.88 | 4e-38 | 145 |
LLPS-Mel-0762 | Melampsora laricipopulina | 55.56 | 2e-30 | 124 |
LLPS-Blg-0035 | Blumeria graminis | 55.42 | 2e-38 | 146 |
LLPS-Lem-0434 | Leptosphaeria maculans | 55.32 | 7e-30 | 123 |
LLPS-Aso-1414 | Aspergillus oryzae | 55.17 | 6e-30 | 123 |
LLPS-Scc-0285 | Schizosaccharomyces cryophilus | 55.04 | 1e-33 | 133 |
LLPS-Coo-0434 | Colletotrichum orbiculare | 54.71 | 2e-33 | 132 |
LLPS-Dos-0138 | Dothistroma septosporum | 54.19 | 4e-33 | 132 |
LLPS-Cog-0746 | Colletotrichum gloeosporioides | 53.53 | 4e-36 | 140 |
LLPS-Trv-0532 | Trichoderma virens | 53.37 | 3e-30 | 124 |
LLPS-Fuo-0661 | Fusarium oxysporum | 53.37 | 3e-35 | 137 |
LLPS-Fuv-1229 | Fusarium verticillioides | 53.37 | 3e-35 | 137 |
LLPS-Asn-1526 | Aspergillus nidulans | 51.75 | 6e-30 | 123 |
LLPS-Prp-1121 | Prunus persica | 51.72 | 2e-29 | 122 |
LLPS-Ora-1914 | Ornithorhynchus anatinus | 46.81 | 8e-138 | 424 |
LLPS-Leo-0112 | Lepisosteus oculatus | 44.2 | 1e-130 | 407 |