LLPS-Mum-3462
Urb1
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Nucleolar pre-ribosomal-associated protein 1; URB1 ribosome biogenesis 1 homolog |
Gene Name: | Urb1, Kiaa0539, Npa1 |
Ensembl Gene: | ENSMUSG00000039929.14 |
Ensembl Protein: | ENSMUSP00000114717.1 |
Organism: | Mus musculus |
Taxa ID: | 10090 |
LLPS Type: | Others |
▼ PROPERTY
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSMUST00000140920.1 | ENSMUSP00000114717.1 |
UniProt | Q571H0, NPA1P_MOUSE, Q9CYN4 | |
GeneBank | AK220219, AC134560, AC126671, AK017495 | BAB30774.1, BAD90144.1 |
RefSeq | NM_029497.1 | NP_083773.1 |
Entrez | 207932 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MGVPKRKASE GPSSAASPAG TVKRTRAEEF TGVRFKTLLK DAQGPGPALE AFVSAAKKLP 60 61 QEDMCDVVEG YIKISMECAE IFQLLSGEKR PESEMLLIFQ AFEAILLRTA SDLTHFHVVG 120 121 ANIVKKLLYN HMKLLCESLY ASGYRMARAC LDLMTAMVTQ GPEAARDVCS SLDLNKKALF 180 181 ALVTKRDSKG VHDVRLAYIQ FALSFLIAGD DNTIGQVLEI KEFIPCIFSS GIKEDKISTI 240 241 NILLSTLKTK VIHNKNITKT QKVRFFTGQF LNHIAALYNW NGITDVTPEK PESAAISAEE 300 301 AGKAMVRDLV HNFLMDLCCS RKHGISFYDA SLGTSGRGGN LTLLHFLLSL KTAAGDDLVA 360 361 SLVVSILKVC PDLLTKYFKE VTFSFLPRVK STWLNNVKLL NKIYEAQPEI SPAFWTREFI 420 421 PLPRLLAMVM VTTVPLVCNK IMFTQALNLD SIPVKHSALS LISDILKRAL KTVDHCLDKE 480 481 TWQDSDVYTA EMMEEFVQLF REALGKILPD LNTVIWVWQS FKKQEIKEDH EKGKKSSSKT 540 541 PAVSKAAQHD VAETILLKSV LLQVICLYQQ VVPHVIMQYN FDFSKLLKGI ISEQGPSQEV 600 601 PPILQHHMLK VALELPANKF LWLKAQEGPE AEIIGGERSV FYLLMKMFVN SNHLQLKSST 660 661 KLLIMKILRD TGVFEHTWRE LELWLEHLDS TAEERKEAVI QFLERILLTL VMNPYSYTDK 720 721 ASEFVQEAST LQASMGKQDA DDVSIPISHI DDVLDMVDVL VEGSEGLDED IGFLLNEDMI 780 781 LLTFPFSALV PAALEARNKL LLGTDCEAGE SIMAYMTAVL TDLLHTQRDP LALCLLLQSY 840 841 DKFEPVSLLC GQQLAQFHRY YSLWIPAQAQ EALPLQVSSS SGPCTLPPSS CFSTLLQTAY 900 901 ESQTLGDKSV QAQLLAAVPS LALQHMLRSA KQVLLYLKST VENFSQLGRS VGPALLQSLL 960 961 GLLKQLVIHA ERLDAQNQQK LEAARAESDL FLDMESVASL ELATDKTIEE LLLAILKHPT 1020 1021 LETWFLALEQ KALPPHTLSP ILVKLLAAHF SAGVLQLLVA SSPILHKLGQ LGLLAKYSEA 1080 1081 ITQSVLIELR TRTLNSTSTP KTLPQLEALR ELHPYMEGVQ IREVTLALLA LPEAHLLTQQ 1140 1141 GTQSLGKERH LSSLGKTLVQ LLASSHQDQL QSSELLWCAE YVRGLGALLP TLAEHELDTV 1200 1201 FLQTLQKDPV LAPVVPEGVL EYCLARRTQT ALGIASLLLQ YSGTHLVKFE LWCGQPGVGP 1260 1261 TLQEHLDDFF PLIHVYLQHR AQGSFMRPTG VSSAVTPVLK ALWRQVRDRF FHITGPSKDA 1320 1321 LHLEALAQLI PFARTKDLHV LMDHLPNTLR TLSNHKSWTL ADSVSAALAE SAEELGSWRK 1380 1381 TLLRSCIQWL AVSFSGREPE DENTQEHEKA MLVRLSELLH AVKEVDPGDW QQFVKTGLKF 1440 1441 RYHDLTFLKT LLSATKLLYG PESSGRTKLV QLSVVHMMLT QHSLFLPTML SSEEEETPDS 1500 1501 GVKETLLDLM STVVRLCPSV CQSSHFAVLL GTYSATLSVL DQKILLLLRA YEQNNLSLIS 1560 1561 FRVLLWGPAA VEHHKTCRSL GKSLWQQPSV GDILRLLDPD RMMQTILHFP QYRKLLPTED 1620 1621 TGEPLVFKDK TARVDLDSLY DPCFLLHLFG ELTRPEFVVD CRKFLDSNAL GLTVAALSSY 1680 1681 DPQMRAAAYY VLAAYYSHLE GARFREQSQV LYLLDVVRNG IRTPNLRLPF TVALFIAKAA 1740 1741 VQILKPEEHM YWKISKFLLS HENLNMDKLP GFYQFFYSSD FQQKTEQEWV LEILRQGIRD 1800 1801 KHCYELCSRR GVFHIILSFF NSPLCDEVAQ NWILEILQNV AHITRSAYEV IRDYSLLTWV 1860 1861 LHILESRFVE TQLLSNVISL LHTLWVTNLG NKAPEERSQP PGQVGSQESE KMLALHMVSE 1920 1921 FLYVLIALTK HLRPTLASAQ LMNFFWTLES VLSYRATIIK LFKDMGRFTV NKVALSTKDV 1980 1981 LILLHKWSLI ERDTKLQGEL KAVIEQHQAK DLMKMLKDKS RPVVAAQARG PRGRKRRHGG 2040 2041 LEETAEPQLE ASCLEKCKDL LRATLTHWGP GDPLPGPTQG SVGQTIPKSK TLSSAHAAVS 2100 2101 LVASWVLRSL AERPVSRAEV TRLLDWLKSH ILPQPMVVAD LLGDSAVKTG IFKLYNHHCS 2160 2161 AQGLVGPAQD VACKFSTVML QLLVAQGRKE SPFHSVAEAL CLDSLNEKEE AKRAPAAFLV 2220 2221 SLYVKDMWLG AQQPDTFLAH IRMVCEAAKD VPLDEPEAIV VLCRNVDSSA QCLTRSR 2277 |
Nucleotide CDS Sequence (FASTA) |
1 Sequence u navailable 20 |
▼ ANNOTATION
Domain | ||||
SMART | LCR-eXXXplorer | CDD |
Mutation | ||||
CGAP |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Localization | ||||
COMPARTMENTS |
Expression | ||||
ArrayExpress | GXD | TISSUES |
Element | ||||
miRWalk | RAID | microRNA.org |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Ran-1747 | Rattus norvegicus | 90.82 | 0.0 | 3963 |
LLPS-Mea-2848 | Mesocricetus auratus | 83.07 | 0.0 | 1129 |
LLPS-Pap-0897 | Pan paniscus | 76.73 | 0.0 | 3260 |
LLPS-Pat-3931 | Pan troglodytes | 76.59 | 0.0 | 3259 |
LLPS-Hos-0646 | Homo sapiens | 76.53 | 0.0 | 3243 |
LLPS-Paa-3613 | Papio anubis | 76.46 | 0.0 | 3167 |
LLPS-Gog-3110 | Gorilla gorilla | 76.46 | 0.0 | 3270 |
LLPS-Cea-4493 | Cercocebus atys | 76.29 | 0.0 | 3211 |
LLPS-Mal-2219 | Mandrillus leucophaeus | 76.2 | 0.0 | 3204 |
LLPS-Poa-2460 | Pongo abelii | 76.14 | 0.0 | 3253 |
LLPS-Ict-0776 | Ictidomys tridecemlineatus | 76.13 | 0.0 | 3252 |
LLPS-Maf-4549 | Macaca fascicularis | 76.11 | 0.0 | 3222 |
LLPS-Mam-4011 | Macaca mulatta | 75.98 | 0.0 | 3221 |
LLPS-Dio-4240 | Dipodomys ordii | 75.84 | 0.0 | 3258 |
LLPS-Rhb-1155 | Rhinopithecus bieti | 75.8 | 0.0 | 3188 |
LLPS-Fud-1248 | Fukomys damarensis | 75.65 | 0.0 | 3240 |
LLPS-Caj-4249 | Callithrix jacchus | 75.54 | 0.0 | 3216 |
LLPS-Aon-1279 | Aotus nancymaae | 75.53 | 0.0 | 3174 |
LLPS-Cas-1700 | Carlito syrichta | 75.53 | 0.0 | 3222 |
LLPS-Chs-3176 | Chlorocebus sabaeus | 75.11 | 0.0 | 3139 |
LLPS-Otg-1857 | Otolemur garnettii | 75.04 | 0.0 | 3186 |
LLPS-Urm-2522 | Ursus maritimus | 74.93 | 0.0 | 2853 |
LLPS-Man-4832 | Macaca nemestrina | 74.67 | 0.0 | 3139 |
LLPS-Eqc-1112 | Equus caballus | 74.62 | 0.0 | 3218 |
LLPS-Cap-4444 | Cavia porcellus | 74.6 | 0.0 | 3174 |
LLPS-Caf-2193 | Canis familiaris | 74.11 | 0.0 | 3208 |
LLPS-Orc-2764 | Oryctolagus cuniculus | 74.11 | 0.0 | 3141 |
LLPS-Aim-3138 | Ailuropoda melanoleuca | 73.59 | 0.0 | 3161 |
LLPS-Fec-4600 | Felis catus | 73.54 | 0.0 | 3103 |
LLPS-Mup-4546 | Mustela putorius furo | 73.12 | 0.0 | 3110 |
LLPS-Sus-2503 | Sus scrofa | 72.42 | 0.0 | 3066 |
LLPS-Ova-0569 | Ovis aries | 72.14 | 0.0 | 1580 |
LLPS-Loa-2920 | Loxodonta africana | 71.6 | 0.0 | 3042 |
LLPS-Bot-4853 | Bos taurus | 70.68 | 0.0 | 2969 |
LLPS-Mod-3753 | Monodelphis domestica | 61.01 | 0.0 | 2588 |
LLPS-Sah-2874 | Sarcophilus harrisii | 60.78 | 0.0 | 2589 |
LLPS-Myl-1375 | Myotis lucifugus | 60.73 | 0.0 | 923 |
LLPS-Tag-3303 | Taeniopygia guttata | 56.5 | 0.0 | 1746 |
LLPS-Gaga-1618 | Gallus gallus | 54.72 | 0.0 | 2284 |
LLPS-Meg-1272 | Meleagris gallopavo | 54.69 | 0.0 | 2261 |
LLPS-Anp-2133 | Anas platyrhynchos | 54.39 | 0.0 | 2268 |
LLPS-Pes-2376 | Pelodiscus sinensis | 53.68 | 0.0 | 1754 |
LLPS-Anc-3436 | Anolis carolinensis | 52.23 | 0.0 | 2072 |
LLPS-Ora-3571 | Ornithorhynchus anatinus | 51.42 | 2e-141 | 469 |
LLPS-Fia-3634 | Ficedula albicollis | 49.82 | 0.0 | 1947 |
LLPS-Xet-2798 | Xenopus tropicalis | 48.73 | 0.0 | 1995 |
LLPS-Lac-2572 | Latimeria chalumnae | 47.38 | 0.0 | 1830 |
LLPS-Scf-3944 | Scleropages formosus | 46.12 | 0.0 | 1638 |
LLPS-Leo-2951 | Lepisosteus oculatus | 45.12 | 0.0 | 1763 |
LLPS-Orn-2915 | Oreochromis niloticus | 44.27 | 0.0 | 1670 |
LLPS-Gaa-2728 | Gasterosteus aculeatus | 43.52 | 0.0 | 1623 |
LLPS-Tar-0291 | Takifugu rubripes | 43.43 | 0.0 | 1636 |
LLPS-Scm-3436 | Scophthalmus maximus | 43.26 | 0.0 | 1626 |
LLPS-Orl-3277 | Oryzias latipes | 42.88 | 0.0 | 1568 |
LLPS-Dar-2832 | Danio rerio | 42.37 | 0.0 | 1598 |
LLPS-Ten-2392 | Tetraodon nigroviridis | 42.33 | 0.0 | 1605 |
LLPS-Xim-2287 | Xiphophorus maculatus | 41.21 | 0.0 | 1470 |
LLPS-Asm-2042 | Astyanax mexicanus | 40.0 | 0.0 | 1386 |
LLPS-Icp-2851 | Ictalurus punctatus | 39.59 | 0.0 | 1389 |
LLPS-Pof-0281 | Poecilia formosa | 37.01 | 0.0 | 725 |
LLPS-Cis-1315 | Ciona savignyi | 34.39 | 5e-34 | 139 |
LLPS-Cii-0686 | Ciona intestinalis | 32.75 | 5e-79 | 281 |
LLPS-Drm-1766 | Drosophila melanogaster | 29.84 | 3e-14 | 83.6 |
LLPS-Phv-2497 | Phaseolus vulgaris | 29.37 | 2e-20 | 103 |
LLPS-Crn-0263 | Cryptococcus neoformans | 29.24 | 2e-22 | 110 |
LLPS-Vir-0863 | Vigna radiata | 29.18 | 3e-20 | 103 |
LLPS-Sem-1314 | Selaginella moellendorffii | 29.08 | 2e-24 | 117 |
LLPS-Miv-0535 | Microbotryum violaceum | 29.02 | 4e-13 | 80.1 |
LLPS-Met-1213 | Medicago truncatula | 28.89 | 4e-19 | 99.8 |
LLPS-Via-0892 | Vigna angularis | 28.83 | 1e-20 | 105 |
LLPS-Sol-1515 | Solanum lycopersicum | 28.74 | 4e-21 | 106 |
LLPS-Mua-2401 | Musa acuminata | 28.57 | 9e-12 | 75.5 |
LLPS-Glm-0624 | Glycine max | 28.36 | 9e-17 | 92.0 |
LLPS-Nia-1131 | Nicotiana attenuata | 27.89 | 7e-20 | 102 |
LLPS-Php-0290 | Physcomitrella patens | 27.81 | 7e-23 | 112 |
LLPS-Brn-3320 | Brassica napus | 27.59 | 3e-17 | 93.6 |
LLPS-Brr-3039 | Brassica rapa | 27.49 | 4e-16 | 90.1 |
LLPS-Orm-1929 | Oryza meridionalis | 27.13 | 7e-06 | 56.2 |
LLPS-Cus-1613 | Cucumis sativus | 27.03 | 4e-15 | 86.7 |
LLPS-Bro-1119 | Brassica oleracea | 27.01 | 1e-16 | 91.3 |
LLPS-Coc-0013 | Corchorus capsularis | 27.0 | 1e-15 | 88.2 |
LLPS-Gor-1721 | Gossypium raimondii | 26.89 | 2e-15 | 87.4 |
LLPS-Viv-1497 | Vitis vinifera | 26.67 | 1e-16 | 91.7 |
LLPS-Art-2871 | Arabidopsis thaliana | 26.61 | 1e-15 | 88.2 |
LLPS-Tru-0453 | Triticum urartu | 26.27 | 2e-16 | 91.3 |
LLPS-Thc-2031 | Theobroma cacao | 26.11 | 7e-15 | 85.9 |
LLPS-Orni-0908 | Oryza nivara | 26.11 | 7e-16 | 89.0 |
LLPS-Scc-0864 | Schizosaccharomyces cryophilus | 25.87 | 4e-06 | 57.0 |
LLPS-Orgl-1452 | Oryza glumaepatula | 25.83 | 7e-15 | 85.9 |
LLPS-Prp-1713 | Prunus persica | 25.82 | 6e-15 | 85.9 |
LLPS-Hea-2713 | Helianthus annuus | 25.77 | 4e-17 | 93.2 |
LLPS-Tra-2957 | Triticum aestivum | 25.76 | 7e-18 | 95.9 |
LLPS-Orbr-0017 | Oryza brachyantha | 25.58 | 3e-12 | 77.0 |
LLPS-Usm-0039 | Ustilago maydis | 25.41 | 3e-14 | 83.6 |
LLPS-Sei-1056 | Setaria italica | 25.28 | 1e-11 | 75.1 |
LLPS-Orb-1664 | Oryza barthii | 25.13 | 1e-11 | 75.5 |
LLPS-Orr-0569 | Oryza rufipogon | 25.07 | 8e-10 | 69.3 |
LLPS-Pot-0267 | Populus trichocarpa | 25.07 | 5e-16 | 89.7 |
LLPS-Spr-0219 | Sporisorium reilianum | 24.94 | 1e-08 | 65.1 |
LLPS-Brd-1749 | Brachypodium distachyon | 24.93 | 4e-14 | 83.2 |
LLPS-Amt-2274 | Amborella trichopoda | 24.8 | 8e-17 | 92.0 |
LLPS-Mae-1710 | Manihot esculenta | 24.73 | 8e-15 | 85.5 |
LLPS-Arl-1670 | Arabidopsis lyrata | 24.53 | 2e-13 | 81.3 |
LLPS-Org-0911 | Oryza glaberrima | 24.44 | 2e-09 | 67.8 |
LLPS-Cae-1947 | Caenorhabditis elegans | 24.37 | 2e-15 | 86.3 |
LLPS-Zem-2161 | Zea mays | 24.36 | 2e-07 | 61.6 |
LLPS-Sob-2140 | Sorghum bicolor | 24.23 | 2e-07 | 61.6 |
LLPS-Lep-1754 | Leersia perrieri | 24.16 | 6e-08 | 62.8 |
LLPS-Orp-1546 | Oryza punctata | 24.07 | 2e-06 | 57.8 |
LLPS-Tum-0846 | Tuber melanosporum | 22.99 | 8e-13 | 78.6 |
LLPS-Pug-1473 | Puccinia graminis | 22.85 | 8e-09 | 65.9 |
LLPS-Scs-1050 | Sclerotinia sclerotiorum | 22.41 | 3e-06 | 57.0 |
LLPS-Pyt-1218 | Pyrenophora teres | 22.37 | 6e-10 | 69.3 |
LLPS-Abg-0140 | Absidia glauca | 22.04 | 3e-25 | 119 |
LLPS-Osl-1403 | Ostreococcus lucimarinus | 21.3 | 8e-07 | 59.3 |
LLPS-Phn-0264 | Phaeosphaeria nodorum | 21.08 | 2e-10 | 70.9 |