LLPS-Mod-2133
RBM26
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | RNA binding motif protein 26 |
Gene Name: | RBM26 |
Ensembl Gene: | ENSMODG00000001574.3 |
Ensembl Protein: | ENSMODP00000001919.3 |
Organism: | Monodelphis domestica |
Taxa ID: | 13616 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nuclear speckle, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSMODT00000001961.3 | ENSMODP00000001919.3 |
UniProt | F7BX04, F7BX04_MONDO |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MKPSKIDLPS GADVPSWRSV SCDADPSALA KYVLALVKKD KSEKELKALC IDQLDVFLQK 60 61 ETQIFVEKLF DAVNTKSYLP PPEQPSSGSL KVEFFQHQEK DIKKDEENDL QTGKDRTNMV 120 121 KRDLEPKIGE EIVREHLATL NEFKSPGLDE LHPRVLKELT DVIAEPLSVI FDESWRTGEV 180 181 PRDWRRANVP IFKKGKKVDS TNYRPITKEE EREKKFSRRL NHSPPQSSSR YRENRSRDDR 240 241 KKDDRSRKRD YDRNPPRRDS YRDRYNRRRG RSRSYSRSRS RSWSKERLRD RDRDRSRTRS 300 301 RSRTRSRERD LGKPKYDLDR TDPLENNYTP VSSVTNISSG HYPVPTLSST ITVIAPTHHG 360 361 NNTTESWSEF HEDQVDHNSY VRPPMPKKRC RDYDEKGFCM RGDMCPFDHG SDPVVVEDVN 420 421 LPGMLPFPAQ PPVVEGPPPP GLPPPPPILT PPPVNLRPPV PPPGPLPPSL PPVTGPPPPL 480 481 PPLQPSGMDA PPNSATSSVP TVVTTGIHHQ PPPAPPSLFT ADTYDTDGYN PEAPSITNTS 540 541 RPMYRHRVHA QRPNLIGLTS GDMDLPPREK PPNKSSMRIV VDSESRKRTI GSGEPGVPAK 600 601 KTWFDKPNFN RTNSPGFQKK VQFGNENTKL ELRKVPPELN NISKLNEHFS RFGTLVNLQV 660 661 AYHGDPEGAL IQFATYEEAK KAISSTEAVF NNRFIKVYWH REGAAQQLQT ASQKVIQPLV 720 721 QQPSLPVVKQ SVKERLGPVP SSNIEPTEAQ SAGPDIPQNV TKLSVKDRLG FVSKPSVSAT 780 781 EKVLSTSTGL TKTVYNPAAL KAAQKSLPAV SISTLDNSEA QKKKQEALKL QQDVRKKKQE 840 841 ILEKHIETQK MLISKLEKNK AMKSEDKAEI MKTLEALTNS ITKLKDELKA VSSGSSLPKS 900 901 VKTKAQMQKE LLDTELDLYK KMQAGEEVTE LRRKYTELQL EAAKRGILST GRGRGIHSRG 960 961 RGTIRGRGRG RGRGRGVPGH AVVDHRPRAL EISAFTESDR EDLLPHFAQY GEIEDCQIDD 1020 1021 SSLHAVITFK TRAEAEAAAI HGSRFKGQDL KLAWNKPVIN MSAVEAEEVE PDEEEFQEES 1080 1081 LVDDSLLQDD DEEEEDNESR SWRR 1104 |
Nucleotide CDS Sequence (FASTA) |
1 ATGAAACCAT CCAAGATTGA CCTTCCATCT GGTGCAGATG TACCATCGTG GAGATCTGTC 60 61 AGCTGTGATG CTGACCCATC AGCTCTAGCT AAATATGTCC TTGCTTTGGT AAAAAAGGAT 120 121 AAAAGTGAAA AAGAGCTGAA GGCATTATGT ATTGATCAAC TGGATGTATT TCTTCAGAAG 180 181 GAGACGCAGA TATTTGTAGA AAAACTTTTT GATGCTGTGA ATACGAAGAG CTACCTACCT 240 241 CCACCTGAAC AACCATCATC AGGAAGTCTA AAGGTAGAAT TTTTTCAACA CCAAGAAAAA 300 301 GATATAAAAA AGGACGAGGA GAATGATCTT CAGACTGGAA AGGATAGAAC AAACATGGTT 360 361 AAAAGGGATT TGGAGCCAAA GATAGGTGAG GAGATAGTGA GAGAGCACCT AGCGACTCTA 420 421 AATGAGTTCA AGTCTCCTGG CCTGGACGAA TTACACCCTA GGGTGCTGAA AGAACTCACA 480 481 GATGTGATCG CTGAACCGCT GTCGGTGATC TTTGATGAAT CGTGGAGAAC GGGAGAGGTG 540 541 CCGCGGGACT GGAGACGGGC AAATGTCCCA ATTTTCAAAA AGGGGAAGAA GGTGGATTCC 600 601 ACAAACTACA GACCGATTAC AAAGGAGGAA GAACGAGAGA AGAAATTTTC TAGAAGGTTA 660 661 AATCATAGTC CTCCCCAGTC AAGTTCCCGG TACAGAGAAA ATAGGAGCCG TGATGACAGG 720 721 AAAAAAGATG ATCGTTCTCG AAAAAGAGAC TATGACCGAA ATCCACCTCG AAGAGATTCC 780 781 TATAGAGACC GGTACAATAG AAGAAGAGGG CGGAGCCGAA GTTATAGTCG AAGTCGCAGT 840 841 CGGAGTTGGA GTAAAGAGCG GTTGCGAGAC AGAGATAGAG ACAGAAGCAG AACTAGAAGC 900 901 CGAAGTCGAA CACGAAGCAG AGAAAGAGAT CTGGGAAAAC CAAAATATGA CCTGGATAGA 960 961 ACAGATCCAT TAGAAAACAA CTATACTCCA GTTTCTTCTG TAACTAACAT TTCGTCTGGC 1020 1021 CACTACCCTG TTCCTACTTT GAGCAGTACT ATTACTGTTA TTGCTCCTAC TCACCATGGT 1080 1081 AATAACACTA CAGAAAGCTG GTCTGAATTT CATGAAGACC AGGTGGACCA TAACTCTTAT 1140 1141 GTAAGACCTC CAATGCCAAA GAAACGTTGC CGAGATTATG ATGAAAAGGG ATTCTGTATG 1200 1201 AGAGGAGACA TGTGCCCTTT TGATCATGGA AGTGACCCTG TAGTAGTAGA AGATGTAAAC 1260 1261 CTTCCTGGCA TGCTGCCTTT CCCAGCACAA CCCCCTGTTG TTGAAGGACC ACCTCCTCCT 1320 1321 GGACTTCCCC CCCCTCCACC AATTCTGACA CCTCCACCTG TGAATCTTAG ACCTCCTGTG 1380 1381 CCACCTCCAG GTCCATTACC ACCTAGCCTT CCTCCAGTCA CAGGACCACC GCCTCCACTT 1440 1441 CCTCCTTTGC AGCCATCTGG TATGGATGCT CCTCCAAATT CTGCAACCAG TTCTGTTCCC 1500 1501 ACTGTAGTAA CAACGGGTAT TCATCACCAG CCTCCGCCTG CACCACCCTC TCTCTTTACA 1560 1561 GCAGATACAT ATGACACAGA TGGCTATAAT CCTGAAGCCC CAAGCATAAC AAACACTTCC 1620 1621 AGACCTATGT ATAGACACAG AGTGCATGCT CAAAGGCCTA ATTTGATAGG ACTTACTTCA 1680 1681 GGAGATATGG ATCTGCCACC CAGAGAAAAG CCTCCTAATA AAAGCAGTAT GAGGATAGTG 1740 1741 GTCGATTCAG AGTCAAGAAA AAGAACCATT GGATCAGGGG AACCTGGAGT TCCTGCTAAG 1800 1801 AAGACTTGGT TTGACAAGCC AAACTTTAAT AGAACAAACA GCCCAGGTTT CCAAAAGAAG 1860 1861 GTTCAGTTTG GAAATGAAAA TACCAAACTT GAACTCAGGA AGGTTCCTCC AGAATTGAAT 1920 1921 AATATCAGCA AACTTAATGA ACATTTCAGC CGATTTGGAA CTTTGGTTAA CTTACAGGTT 1980 1981 GCCTATCATG GTGATCCTGA AGGTGCACTT ATCCAATTTG CAACATATGA AGAAGCAAAA 2040 2041 AAAGCAATCT CTAGTACAGA AGCAGTGTTC AATAATCGTT TTATTAAAGT CTATTGGCAC 2100 2101 CGAGAGGGGG CTGCCCAGCA ACTGCAAACA GCTTCCCAGA AAGTTATACA ACCTTTAGTC 2160 2161 CAGCAACCCA GTTTGCCTGT TGTCAAGCAG TCTGTGAAAG AACGATTAGG TCCTGTACCT 2220 2221 TCAAGTAATA TTGAACCTAC AGAAGCCCAA AGTGCTGGTC CAGATATTCC TCAGAATGTA 2280 2281 ACTAAGTTAT CTGTGAAGGA CAGGTTGGGT TTTGTATCAA AGCCATCTGT TTCAGCAACT 2340 2341 GAAAAGGTGT TGTCCACTTC TACTGGCCTC ACAAAAACAG TGTACAATCC AGCTGCTTTG 2400 2401 AAAGCTGCAC AGAAATCTTT GCCTGCTGTT TCCATCTCTA CATTAGATAA CAGCGAAGCA 2460 2461 CAGAAAAAAA AACAGGAAGC ACTAAAACTT CAACAGGATG TGAGAAAGAA GAAGCAAGAG 2520 2521 ATTTTAGAAA AGCACATTGA AACACAGAAG ATGTTAATTT CAAAACTGGA GAAAAACAAA 2580 2581 GCAATGAAGT CTGAAGATAA GGCAGAAATA ATGAAAACTT TGGAGGCTTT GACAAATAGC 2640 2641 ATTACTAAAT TAAAAGATGA ATTGAAAGCT GTTTCATCTG GAAGCTCTCT TCCCAAAAGC 2700 2701 GTGAAAACCA AAGCTCAGAT GCAGAAAGAA TTACTGGACA CAGAACTGGA TTTGTATAAG 2760 2761 AAGATGCAGG CTGGAGAAGA AGTTACTGAA CTTAGGAGAA AATATACAGA ACTACAGCTT 2820 2821 GAAGCTGCAA AAAGAGGGAT TCTTTCAACT GGTCGAGGTC GAGGAATTCA TTCCAGAGGT 2880 2881 CGAGGTACAA TTCGTGGCAG AGGAAGGGGT CGTGGTCGAG GGAGAGGTGT TCCTGGTCAT 2940 2941 GCTGTGGTAG ACCATCGCCC ACGAGCATTA GAGATCTCTG CATTTACTGA GAGTGATAGA 3000 3001 GAAGACCTTC TTCCCCATTT TGCGCAATAT GGTGAAATCG AAGATTGTCA GATTGATGAC 3060 3061 TCCTCTCTTC ATGCCGTAAT TACATTCAAG ACAAGAGCAG AAGCAGAAGC AGCTGCAATT 3120 3121 CATGGATCTC GTTTCAAAGG GCAAGATCTT AAACTGGCCT GGAATAAGCC TGTAATAAAC 3180 3181 ATGTCAGCTG TTGAAGCAGA AGAAGTTGAA CCTGATGAGG AGGAATTTCA GGAAGAGTCT 3240 3241 TTGGTGGATG ACTCATTGCT TCAAGATGAT GATGAAGAGG AAGAGGACAA TGAATCTCGT 3300 3301 TCATGGAGAA GATGA 3315 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Ova-2172 | Ovis aries | 100.0 | 1e-41 | 170 |
LLPS-Eqc-2727 | Equus caballus | 100.0 | 1e-41 | 170 |
LLPS-Cas-1536 | Carlito syrichta | 100.0 | 1e-41 | 170 |
LLPS-Myl-0693 | Myotis lucifugus | 98.84 | 3e-43 | 175 |
LLPS-Loa-1863 | Loxodonta africana | 98.82 | 5e-43 | 174 |
LLPS-Nol-2894 | Nomascus leucogenys | 98.78 | 9e-41 | 167 |
LLPS-Meg-0041 | Meleagris gallopavo | 98.7 | 1e-38 | 160 |
LLPS-Anp-2724 | Anas platyrhynchos | 98.7 | 6e-39 | 161 |
LLPS-Paa-0858 | Papio anubis | 98.23 | 8e-63 | 236 |
LLPS-Mal-0991 | Mandrillus leucophaeus | 98.23 | 8e-63 | 236 |
LLPS-Cea-0020 | Cercocebus atys | 98.23 | 6e-63 | 236 |
LLPS-Pat-0937 | Pan troglodytes | 98.23 | 7e-63 | 236 |
LLPS-Pap-3029 | Pan paniscus | 98.23 | 8e-63 | 236 |
LLPS-Sah-1768 | Sarcophilus harrisii | 97.76 | 0.0 | 1250 |
LLPS-Ora-1557 | Ornithorhynchus anatinus | 97.53 | 5e-40 | 165 |
LLPS-Pes-0935 | Pelodiscus sinensis | 97.53 | 5e-41 | 168 |
LLPS-Dio-2158 | Dipodomys ordii | 96.59 | 4e-43 | 175 |
LLPS-Sus-1926 | Sus scrofa | 94.28 | 0.0 | 1192 |
LLPS-Bot-2438 | Bos taurus | 94.15 | 0.0 | 1194 |
LLPS-Mup-0664 | Mustela putorius furo | 94.15 | 0.0 | 1193 |
LLPS-Chs-1304 | Chlorocebus sabaeus | 94.15 | 0.0 | 1161 |
LLPS-Aon-1716 | Aotus nancymaae | 94.15 | 0.0 | 1162 |
LLPS-Caf-1593 | Canis familiaris | 94.15 | 0.0 | 1193 |
LLPS-Mam-2481 | Macaca mulatta | 94.15 | 0.0 | 1161 |
LLPS-Fec-1055 | Felis catus | 94.15 | 0.0 | 1193 |
LLPS-Man-1874 | Macaca nemestrina | 94.15 | 0.0 | 1161 |
LLPS-Ran-2779 | Rattus norvegicus | 93.62 | 0.0 | 1187 |
LLPS-Orc-0782 | Oryctolagus cuniculus | 93.62 | 0.0 | 1182 |
LLPS-Maf-0521 | Macaca fascicularis | 93.53 | 0.0 | 1156 |
LLPS-Gog-1021 | Gorilla gorilla | 93.39 | 0.0 | 1149 |
LLPS-Caj-4137 | Callithrix jacchus | 93.39 | 0.0 | 1149 |
LLPS-Hos-1502 | Homo sapiens | 93.39 | 0.0 | 1149 |
LLPS-Otg-1996 | Otolemur garnettii | 93.36 | 0.0 | 1166 |
LLPS-Mea-1139 | Mesocricetus auratus | 93.35 | 0.0 | 1181 |
LLPS-Aim-0481 | Ailuropoda melanoleuca | 93.26 | 8e-42 | 171 |
LLPS-Ict-1617 | Ictidomys tridecemlineatus | 93.0 | 0.0 | 1160 |
LLPS-Mum-1032 | Mus musculus | 92.6 | 0.0 | 1169 |
LLPS-Xet-0917 | Xenopus tropicalis | 92.31 | 1e-13 | 80.1 |
LLPS-Fud-1084 | Fukomys damarensis | 91.81 | 0.0 | 1153 |
LLPS-Urm-0653 | Ursus maritimus | 91.22 | 0.0 | 1120 |
LLPS-Tag-0287 | Taeniopygia guttata | 90.8 | 6e-39 | 161 |
LLPS-Fia-1234 | Ficedula albicollis | 90.8 | 6e-39 | 161 |
LLPS-Poa-2996 | Pongo abelii | 90.69 | 0.0 | 1091 |
LLPS-Gaga-2851 | Gallus gallus | 89.66 | 6e-38 | 158 |
LLPS-Lac-1579 | Latimeria chalumnae | 88.5 | 1e-53 | 208 |
LLPS-Anc-1319 | Anolis carolinensis | 87.98 | 0.0 | 1116 |
LLPS-Rhb-0756 | Rhinopithecus bieti | 87.86 | 0.0 | 1039 |
LLPS-Orl-1160 | Oryzias latipes | 86.89 | 3e-23 | 111 |
LLPS-Cap-0069 | Cavia porcellus | 85.2 | 0.0 | 1065 |
LLPS-Icp-3231 | Ictalurus punctatus | 78.69 | 3e-20 | 101 |
LLPS-Dar-2020 | Danio rerio | 77.91 | 3e-29 | 130 |
LLPS-Ten-0534 | Tetraodon nigroviridis | 77.59 | 7e-19 | 97.1 |
LLPS-Tar-1063 | Takifugu rubripes | 77.05 | 1e-19 | 99.8 |
LLPS-Xim-0140 | Xiphophorus maculatus | 77.05 | 1e-19 | 99.8 |
LLPS-Scm-0316 | Scophthalmus maximus | 77.05 | 6e-20 | 100 |
LLPS-Pof-3138 | Poecilia formosa | 77.05 | 8e-20 | 100 |
LLPS-Orn-2665 | Oreochromis niloticus | 77.05 | 2e-19 | 99.0 |
LLPS-Asm-0574 | Astyanax mexicanus | 76.74 | 4e-29 | 130 |
LLPS-Gaa-3138 | Gasterosteus aculeatus | 73.77 | 1e-18 | 96.7 |
LLPS-Leo-0122 | Lepisosteus oculatus | 72.87 | 0.0 | 905 |
LLPS-Tum-0911 | Tuber melanosporum | 72.41 | 1e-07 | 60.1 |
LLPS-Scf-3966 | Scleropages formosus | 71.19 | 1e-44 | 180 |
LLPS-Cii-0419 | Ciona intestinalis | 68.97 | 2e-16 | 89.4 |
LLPS-Drm-0005 | Drosophila melanogaster | 62.86 | 1e-09 | 67.0 |
LLPS-Abg-0351 | Absidia glauca | 62.16 | 1e-08 | 63.9 |
LLPS-Mua-2218 | Musa acuminata | 61.36 | 1e-10 | 70.5 |
LLPS-Lep-0501 | Leersia perrieri | 59.09 | 1e-09 | 66.6 |
LLPS-Cae-0922 | Caenorhabditis elegans | 58.82 | 1e-12 | 76.3 |
LLPS-Orgl-1796 | Oryza glumaepatula | 56.82 | 7e-10 | 67.8 |
LLPS-Sot-2238 | Solanum tuberosum | 56.82 | 2e-09 | 66.6 |
LLPS-Brd-0813 | Brachypodium distachyon | 56.82 | 5e-10 | 68.2 |
LLPS-Orb-1066 | Oryza barthii | 56.82 | 8e-10 | 67.4 |
LLPS-Orm-0474 | Oryza meridionalis | 56.82 | 6e-10 | 67.8 |
LLPS-Orr-1808 | Oryza rufipogon | 56.82 | 6e-10 | 67.8 |
LLPS-Org-1509 | Oryza glaberrima | 56.82 | 6e-10 | 67.8 |
LLPS-Ors-1248 | Oryza sativa | 56.82 | 6e-10 | 67.8 |
LLPS-Pot-2132 | Populus trichocarpa | 56.82 | 2e-09 | 66.2 |
LLPS-Orp-1335 | Oryza punctata | 56.82 | 8e-10 | 67.4 |
LLPS-Orbr-2217 | Oryza brachyantha | 56.82 | 7e-10 | 67.8 |
LLPS-Dac-1243 | Daucus carota | 55.32 | 8e-10 | 67.4 |
LLPS-Coc-1993 | Corchorus capsularis | 55.32 | 4e-10 | 68.6 |
LLPS-Tra-1279 | Triticum aestivum | 54.55 | 7e-10 | 67.8 |
LLPS-Hea-1573 | Helianthus annuus | 54.55 | 9e-09 | 63.9 |
LLPS-Tru-1345 | Triticum urartu | 54.55 | 7e-10 | 67.8 |
LLPS-Zem-2549 | Zea mays | 54.55 | 2e-09 | 66.6 |
LLPS-Sob-1149 | Sorghum bicolor | 54.55 | 2e-09 | 66.6 |
LLPS-Usm-0995 | Ustilago maydis | 53.23 | 2e-10 | 69.3 |
LLPS-Glm-2206 | Glycine max | 53.19 | 2e-09 | 66.2 |
LLPS-Prp-1133 | Prunus persica | 53.19 | 1e-09 | 66.6 |
LLPS-Mae-0919 | Manihot esculenta | 52.94 | 8e-10 | 67.8 |
LLPS-Via-0622 | Vigna angularis | 52.38 | 9e-09 | 63.9 |
LLPS-Vir-1158 | Vigna radiata | 52.38 | 8e-09 | 64.3 |
LLPS-Phv-1455 | Phaseolus vulgaris | 52.38 | 7e-09 | 64.3 |
LLPS-Sei-0853 | Setaria italica | 52.27 | 4e-09 | 65.5 |
LLPS-Cus-0483 | Cucumis sativus | 51.92 | 1e-09 | 66.6 |
LLPS-Met-0540 | Medicago truncatula | 51.85 | 9e-10 | 67.4 |
LLPS-Thc-2080 | Theobroma cacao | 51.79 | 3e-10 | 68.9 |
LLPS-Gor-2221 | Gossypium raimondii | 51.79 | 4e-10 | 68.6 |
LLPS-Hov-1537 | Hordeum vulgare | 50.94 | 8e-10 | 67.4 |
LLPS-Viv-1004 | Vitis vinifera | 50.0 | 9e-10 | 67.4 |
LLPS-Nia-0625 | Nicotiana attenuata | 50.0 | 8e-10 | 67.4 |
LLPS-Art-2721 | Arabidopsis thaliana | 48.21 | 1e-09 | 67.0 |
LLPS-Spr-0656 | Sporisorium reilianum | 48.0 | 3e-10 | 68.6 |
LLPS-Yal-1156 | Yarrowia lipolytica | 46.55 | 7e-06 | 53.9 |
LLPS-Pug-0724 | Puccinia graminis | 46.15 | 9e-10 | 67.0 |
LLPS-Scp-0698 | Schizosaccharomyces pombe | 45.21 | 1e-09 | 66.2 |
LLPS-Arl-0936 | Arabidopsis lyrata | 44.78 | 1e-09 | 66.6 |
LLPS-Brn-0479 | Brassica napus | 44.78 | 1e-09 | 66.6 |
LLPS-Bro-1216 | Brassica oleracea | 44.78 | 1e-09 | 66.6 |
LLPS-Php-0307 | Physcomitrella patens | 42.86 | 7e-09 | 64.7 |
LLPS-Beb-0061 | Beauveria bassiana | 38.33 | 2e-06 | 56.2 |
LLPS-Scc-1151 | Schizosaccharomyces cryophilus | 37.25 | 3e-09 | 64.7 |
LLPS-Sol-2383 | Solanum lycopersicum | 37.14 | 2e-07 | 58.9 |
LLPS-Aso-1480 | Aspergillus oryzae | 35.06 | 1e-06 | 57.4 |
LLPS-Asf-0389 | Aspergillus flavus | 35.06 | 1e-06 | 57.4 |
LLPS-Amt-0204 | Amborella trichopoda | 31.25 | 6e-10 | 67.8 |
LLPS-Crn-0923 | Cryptococcus neoformans | 31.1 | 2e-07 | 59.3 |