LLPS-Met-2601
11443549
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Heterogeneous nuclear ribonucleoprotein |
| Gene Name: | 11443549, MTR_8g073580, MtrunA17_Chr8g0370451 |
| Ensembl Gene: | MTR_8g073580 |
| Ensembl Protein: | KEH20355 |
| Organism: | Medicago truncatula |
| Taxa ID: | 3880 |
| LLPS Type: | Scaffold |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | KEH20355 | KEH20355 |
| Ensembl | AET03606 | AET03606 |
| UniProt | G7L9D8, G7L9D8_MEDTR | |
| GeneBank | CM001224, PSQE01000008 | RHN41852.1, AET03606.1 |
| RefSeq | XM_003629082.2 | XP_003629130.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MDPYRYPPSL DSPFSRSYAD RGTIYGAPRG AMLGSGGVSD GYEVGSKRQR MMESNPYFAV 60 61 SSGTGSYQHY GYAGGGFQPP PPFPVVRLRG LPFNCTDIDI LKFFAGLTIV DVLLVNKSGR 120 121 FSGEAFVVFA GAMQVEFALQ RDRQNMGRRY VEVFRCKKQD YYNAVAGEIN YEGIYDNDYQ 180 181 GSPPPSRSKR FSDKEQMDYT EILKMRGLPF LVTKSQIIDF FKDYKLIEGR VHIACRPDGK 240 241 ATGEAYVEFV SPDEAKRAMF KDKMTIGSRY VELFPSTPDE ARRAESRSRQ 290 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCCGATCG TGGAACCATC TACGGCGCTC CCAGGGGTGA GCAGCGGAAC AGGCAGCTAT 60 61 CAACATTATG GATATGCCGG TGGTGGCTTC CAGCCCCCTC CTCCTTTTCC TGTGGTTCGT 120 121 CTCAGGGGGC TTCCATTTAA CTGCACAGAC ATAGACATTT TGAAGTTCTT TGCTGGTCTG 180 181 ACCATTGTCG ATGTGTTGCT GGTCAACAAG AGTGGACGGT TCTCTGGAGA GGCCTTTGTA 240 241 GTCTTTGCAG GAGCAATGCA GGTTGAGTTT GCTTTACAAA GAGATCGACA GAACATGGGT 300 301 CGCAGATATG TGGAAGTTTT CAGGTGTAAG AAGCAGGATT ATTACAATGC TGTTGCTGGT 360 361 GAGATCAATT ACGAAGGAAT ATATGACAAC GATTACCAAG GAAGCCCTCC TCCCTCCAGG 420 421 TCCAAGAGAT TCAGTGACAA AGAACAAATG GATTACACTG AGATATTGAA GATGCGTGGA 480 481 CTTCCTTTCT TGGTGACTAA ATCTCAAATT ATTGACTTTT TTAAAGATTA CAAGCTGATA 540 541 GAAGGTAGGG TACACATTGC ATGTCGCCCA GATGGTAAAG CTACTGGAGA GGCATATGTA 600 601 GAGTTTGTTT CGCCAGATGA GGCAAAGAGA GCAATGTTCA AGGATAAAAT GACCATTGGT 660 661 TCAAGGTATG TGGAACTGTT CCCTTCTACA CCAGATGAAG CTAGACGGGC CGAGTCAAGA 720 721 TCAAGGCAAT AA 732 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Vir-1605 | Vigna radiata | 88.43 | 5e-157 | 446 |
| LLPS-Via-1641 | Vigna angularis | 88.08 | 2e-152 | 434 |
| LLPS-Phv-1095 | Phaseolus vulgaris | 88.06 | 4e-156 | 444 |
| LLPS-Glm-0826 | Glycine max | 87.69 | 2e-155 | 442 |
| LLPS-Gor-1164 | Gossypium raimondii | 81.65 | 1e-140 | 404 |
| LLPS-Pot-2527 | Populus trichocarpa | 81.27 | 3e-148 | 424 |
| LLPS-Prp-1055 | Prunus persica | 80.9 | 2e-147 | 422 |
| LLPS-Coc-1058 | Corchorus capsularis | 79.54 | 3e-138 | 398 |
| LLPS-Cus-1981 | Cucumis sativus | 78.65 | 4e-143 | 410 |
| LLPS-Viv-1441 | Vitis vinifera | 78.65 | 3e-144 | 414 |
| LLPS-Mae-1059 | Manihot esculenta | 77.92 | 8e-123 | 360 |
| LLPS-Thc-1868 | Theobroma cacao | 76.98 | 6e-132 | 386 |
| LLPS-Dac-1520 | Daucus carota | 73.51 | 4e-125 | 365 |
| LLPS-Hea-0422 | Helianthus annuus | 67.78 | 9e-107 | 318 |
| LLPS-Sot-1432 | Solanum tuberosum | 67.16 | 5e-108 | 321 |
| LLPS-Bro-1645 | Brassica oleracea | 67.16 | 3e-107 | 319 |
| LLPS-Art-2019 | Arabidopsis thaliana | 66.67 | 2e-110 | 327 |
| LLPS-Sol-2172 | Solanum lycopersicum | 66.42 | 2e-107 | 320 |
| LLPS-Arl-1749 | Arabidopsis lyrata | 66.3 | 4e-110 | 327 |
| LLPS-Nia-1085 | Nicotiana attenuata | 66.17 | 1e-115 | 341 |
| LLPS-Brn-1091 | Brassica napus | 65.61 | 5e-105 | 315 |
| LLPS-Orni-1772 | Oryza nivara | 61.72 | 8e-87 | 267 |
| LLPS-Ors-0047 | Oryza sativa | 61.33 | 3e-85 | 265 |
| LLPS-Brr-0770 | Brassica rapa | 60.54 | 4e-92 | 291 |
| LLPS-Mua-1987 | Musa acuminata | 60.31 | 6e-89 | 275 |
| LLPS-Orgl-0517 | Oryza glumaepatula | 59.8 | 1e-97 | 296 |
| LLPS-Org-0338 | Oryza glaberrima | 59.46 | 9e-97 | 294 |
| LLPS-Orb-0272 | Oryza barthii | 59.04 | 8e-95 | 289 |
| LLPS-Lep-2369 | Leersia perrieri | 58.8 | 4e-97 | 295 |
| LLPS-Orr-1414 | Oryza rufipogon | 58.14 | 3e-93 | 285 |
| LLPS-Tra-0456 | Triticum aestivum | 58.09 | 2e-93 | 285 |
| LLPS-Orbr-0285 | Oryza brachyantha | 58.02 | 9e-90 | 276 |
| LLPS-Tru-1342 | Triticum urartu | 57.97 | 3e-91 | 280 |
| LLPS-Hov-0502 | Hordeum vulgare | 57.43 | 4e-96 | 293 |
| LLPS-Sei-2361 | Setaria italica | 56.61 | 6e-85 | 264 |
| LLPS-Ori-2415 | Oryza indica | 55.67 | 9e-87 | 267 |
| LLPS-Brd-0281 | Brachypodium distachyon | 55.63 | 5e-86 | 266 |
| LLPS-Zem-1176 | Zea mays | 55.59 | 3e-81 | 256 |
| LLPS-Sob-0834 | Sorghum bicolor | 55.37 | 4e-79 | 258 |
| LLPS-Orm-1705 | Oryza meridionalis | 52.67 | 2e-78 | 246 |
| LLPS-Sem-0374 | Selaginella moellendorffii | 51.4 | 1e-73 | 234 |
| LLPS-Pap-0970 | Pan paniscus | 50.0 | 4e-06 | 52.0 |
| LLPS-Ten-0768 | Tetraodon nigroviridis | 48.65 | 7e-11 | 66.2 |
| LLPS-Sus-3361 | Sus scrofa | 47.3 | 1e-11 | 68.6 |
| LLPS-Chs-1508 | Chlorocebus sabaeus | 47.3 | 1e-11 | 68.6 |
| LLPS-Mea-2440 | Mesocricetus auratus | 47.3 | 1e-11 | 68.6 |
| LLPS-Mum-2764 | Mus musculus | 47.3 | 1e-11 | 68.6 |
| LLPS-Caj-2150 | Callithrix jacchus | 47.3 | 1e-11 | 68.6 |
| LLPS-Bot-0799 | Bos taurus | 47.3 | 1e-11 | 68.6 |
| LLPS-Dio-2296 | Dipodomys ordii | 47.3 | 1e-11 | 68.6 |
| LLPS-Tut-0580 | Tursiops truncatus | 47.3 | 1e-11 | 68.6 |
| LLPS-Aim-2771 | Ailuropoda melanoleuca | 47.3 | 1e-11 | 68.6 |
| LLPS-Mup-3900 | Mustela putorius furo | 47.3 | 1e-11 | 68.6 |
| LLPS-Myl-1129 | Myotis lucifugus | 47.3 | 1e-11 | 68.6 |
| LLPS-Ova-1724 | Ovis aries | 47.3 | 1e-11 | 68.6 |
| LLPS-Ran-0748 | Rattus norvegicus | 47.3 | 1e-11 | 68.6 |
| LLPS-Anp-1893 | Anas platyrhynchos | 47.3 | 7e-12 | 69.3 |
| LLPS-Fec-2381 | Felis catus | 47.3 | 1e-11 | 68.6 |
| LLPS-Urm-0583 | Ursus maritimus | 47.3 | 1e-11 | 68.6 |
| LLPS-Meg-1179 | Meleagris gallopavo | 47.3 | 6e-12 | 69.3 |
| LLPS-Hos-2850 | Homo sapiens | 47.3 | 1e-11 | 68.6 |
| LLPS-Orc-1885 | Oryctolagus cuniculus | 47.3 | 1e-11 | 68.6 |
| LLPS-Otg-1806 | Otolemur garnettii | 47.3 | 1e-11 | 68.6 |
| LLPS-Mam-2741 | Macaca mulatta | 47.3 | 1e-11 | 68.6 |
| LLPS-Eqc-0340 | Equus caballus | 47.3 | 1e-11 | 68.6 |
| LLPS-Cap-3704 | Cavia porcellus | 47.3 | 1e-11 | 68.6 |
| LLPS-Poa-3524 | Pongo abelii | 47.3 | 1e-11 | 68.6 |
| LLPS-Caf-1803 | Canis familiaris | 47.3 | 1e-11 | 68.6 |
| LLPS-Ict-2127 | Ictidomys tridecemlineatus | 47.3 | 1e-11 | 68.6 |
| LLPS-Leo-3473 | Lepisosteus oculatus | 46.15 | 5e-10 | 63.9 |
| LLPS-Aon-3262 | Aotus nancymaae | 45.57 | 9e-12 | 68.9 |
| LLPS-Cea-3359 | Cercocebus atys | 45.57 | 7e-12 | 69.3 |
| LLPS-Ora-1452 | Ornithorhynchus anatinus | 45.57 | 1e-11 | 68.6 |
| LLPS-Maf-4270 | Macaca fascicularis | 45.57 | 7e-12 | 69.3 |
| LLPS-Mal-2336 | Mandrillus leucophaeus | 45.57 | 7e-12 | 69.3 |
| LLPS-Paa-3659 | Papio anubis | 45.57 | 7e-12 | 69.3 |
| LLPS-Man-3130 | Macaca nemestrina | 45.57 | 7e-12 | 69.3 |
| LLPS-Mod-0286 | Monodelphis domestica | 45.57 | 8e-12 | 68.9 |
| LLPS-Pat-4832 | Pan troglodytes | 45.57 | 6e-12 | 69.3 |
| LLPS-Anc-1653 | Anolis carolinensis | 45.57 | 6e-12 | 69.3 |
| LLPS-Nol-0441 | Nomascus leucogenys | 45.57 | 6e-12 | 69.3 |
| LLPS-Gaga-1060 | Gallus gallus | 45.57 | 7e-12 | 69.3 |
| LLPS-Fud-2750 | Fukomys damarensis | 44.59 | 3e-10 | 64.3 |
| LLPS-Lac-0525 | Latimeria chalumnae | 44.3 | 7e-11 | 66.2 |
| LLPS-Pof-3894 | Poecilia formosa | 44.29 | 1e-06 | 53.5 |
| LLPS-Sah-0818 | Sarcophilus harrisii | 41.1 | 1e-06 | 53.5 |
| LLPS-Loa-0847 | Loxodonta africana | 40.54 | 7e-07 | 54.7 |
| LLPS-Xet-0392 | Xenopus tropicalis | 38.27 | 2e-10 | 65.1 |
| LLPS-Gas-1331 | Galdieria sulphuraria | 37.21 | 7e-13 | 72.8 |
| LLPS-Tar-1115 | Takifugu rubripes | 37.04 | 7e-09 | 60.1 |
| LLPS-Php-0153 | Physcomitrella patens | 36.67 | 4e-13 | 73.2 |
| LLPS-Scm-3206 | Scophthalmus maximus | 36.22 | 1e-26 | 112 |
| LLPS-Orn-2244 | Oreochromis niloticus | 35.96 | 2e-27 | 114 |
| LLPS-Cis-1912 | Ciona savignyi | 35.82 | 1e-25 | 111 |
| LLPS-Icp-1740 | Ictalurus punctatus | 35.8 | 1e-08 | 59.3 |
| LLPS-Asm-1141 | Astyanax mexicanus | 35.8 | 1e-08 | 59.7 |
| LLPS-Gog-1807 | Gorilla gorilla | 35.8 | 1e-08 | 59.3 |
| LLPS-Scf-1614 | Scleropages formosus | 35.8 | 6e-09 | 60.5 |
| LLPS-Dar-1241 | Danio rerio | 35.8 | 2e-08 | 58.9 |
| LLPS-Cas-1000 | Carlito syrichta | 35.8 | 8e-09 | 60.1 |
| LLPS-Xim-2829 | Xiphophorus maculatus | 34.91 | 7e-24 | 103 |
| LLPS-Cii-2238 | Ciona intestinalis | 34.83 | 5e-23 | 103 |
| LLPS-Orl-0994 | Oryzias latipes | 33.33 | 2e-07 | 55.8 |
| LLPS-Rhb-3906 | Rhinopithecus bieti | 33.33 | 1e-24 | 108 |
| LLPS-Tag-1120 | Taeniopygia guttata | 33.33 | 3e-24 | 107 |
| LLPS-Fia-3675 | Ficedula albicollis | 32.58 | 3e-08 | 58.9 |
| LLPS-Pes-3491 | Pelodiscus sinensis | 32.58 | 3e-08 | 58.5 |
| LLPS-Drm-0081 | Drosophila melanogaster | 32.52 | 2e-23 | 105 |
| LLPS-Gaa-1185 | Gasterosteus aculeatus | 31.82 | 8e-23 | 100 |
| LLPS-Cae-1723 | Caenorhabditis elegans | 30.2 | 4e-22 | 100 |