• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Met-2008
11433183

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: RNA recognition motif
Gene Name: 11433183, MTR_5g079870
Ensembl Gene: MTR_5g079870
Ensembl Protein: KEH28253
Organism: Medicago truncatula
Taxa ID: 3880
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
Nuclear speckle, NucleolusPredicted from orthologs(View)

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblKEH28253KEH28253
EnsemblKEH28254KEH28254
EnsemblAES99364AES99364
UniProtG7KBR1, G7KBR1_MEDTR
GeneBankCM001221AES99364.1
RefSeqXM_003616358.2XP_003616406.1

▼ SEQUENCE

Protein Sequence (FASTA)
1     MRRNSPGYYS  PPRRGYGGRG  GGGGGGGRRG  YGGGGGGGGR  RRESNNGSLL  VRNIPLDCRP  60
61    EELRAPFERF  GPVRDVYIPK  DYYSGQPRGF  AFVQFVDAYE  ASEAQYHMDR  QIFAGREISV  120
121   VVAAETRKRP  EEMRHRTSRS  RGPGGSYGGQ  RSSYHGRSRS  RSISRSRSPP  YHSGSRNRYR  180
181   SRSRSFSPAP  RRQGDYSVSP  RRHAERPRSP  RSPPRSPPVE  RDADHKRRSY  SPLGYGNDVD  240
241   QNQSNGYAEK  SVYKSEADRG  PWKSSRSPPG  SRSRSRSVDL  SPRRGR  286
Nucleotide CDS Sequence (FASTA)
1     ATGAAGCTCT  GTTTTTTCCC  GTACAGACAA  CCTCGAGGCT  TTGCATTCGT  GCAGTTTGTG  60
61    GATGCATATG  AGGCCTCTGA  GGCGCAGTAC  CATATGGACA  GACAAATTTT  TGCTGGAAGG  120
121   GAAATATCTG  TTGTTGTGGC  TGCAGAGACA  AGAAAAAGGC  CAGAGGAGAT  GCGTCATAGG  180
181   ACTAGTAGGT  CCAGAGGACC  AGGAGGGAGC  TATGGAGGGC  AAAGGTCTTC  CTACCACGGG  240
241   CGTTCTCGAT  CTCGCTCAAT  TTCCAGATCA  AGATCACCTC  CTTATCACTC  TGGTTCTAGA  300
301   AACCGCTATC  GCTCAAGGTC  CAGGTCCTTC  TCTCCTGCCC  CAAGAAGGCA  AGGTGACTAC  360
361   TCTGTTTCTC  CTAGAAGGCA  TGCAGAACGC  CCTAGATCAC  CTAGAAGTCC  TCCTAGAAGT  420
421   CCTCCTGTGG  AGCGAGATGC  AGATCATAAA  CGCAGGTCGT  ATTCTCCTCT  AGGTTATGGC  480
481   AATGATGTTG  ATCAGAATCA  AAGCAATGGA  TATGCTGAGA  AATCTGTGTA  CAAATCTGAG  540
541   GCGGATAGAG  GCCCGTGGAA  GTCATCAAGA  TCACCCCCAG  GATCTAGATC  TAGATCAAGA  600
601   TCTGTTGATT  TGTCACCTAG  ACGTGGCAGA  TGA  633

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Prp-2274Prunus persica86.816e-48 167
LLPS-Viv-2389Vitis vinifera86.817e-47 166
LLPS-Bro-0313Brassica oleracea83.532e-42 153
LLPS-Brr-2589Brassica rapa83.532e-42 153
LLPS-Brn-0321Brassica napus83.532e-42 153
LLPS-Gor-0924Gossypium raimondii83.526e-46 162
LLPS-Sob-1471Sorghum bicolor82.953e-44 157
LLPS-Sei-1379Setaria italica81.821e-43 155
LLPS-Cus-2350Cucumis sativus81.321e-44 159
LLPS-Tru-0982Triticum urartu80.822e-34 133
LLPS-Glm-0673Glycine max80.451e-52 179
LLPS-Org-1344Oryza glaberrima80.225e-45 159
LLPS-Orm-0272Oryza meridionalis80.222e-45 160
LLPS-Orr-1472Oryza rufipogon80.223e-45 159
LLPS-Orp-2042Oryza punctata80.222e-45 160
LLPS-Ors-2079Oryza sativa80.225e-45 159
LLPS-Orgl-1662Oryza glumaepatula80.223e-45 159
LLPS-Orni-1209Oryza nivara80.221e-44 160
LLPS-Ori-0461Oryza indica80.225e-45 159
LLPS-Orb-1925Oryza barthii80.223e-45 159
LLPS-Arl-2960Arabidopsis lyrata79.73e-43 154
LLPS-Via-0069Vigna angularis79.74e-54 183
LLPS-Zem-0945Zea mays79.123e-42 154
LLPS-Orbr-2367Oryza brachyantha79.125e-45 159
LLPS-Lep-0739Leersia perrieri79.125e-45 160
LLPS-Phv-2445Phaseolus vulgaris78.956e-53 180
LLPS-Hea-0746Helianthus annuus78.021e-43 157
LLPS-Art-1235Arabidopsis thaliana77.446e-44 156
LLPS-Coc-2308Corchorus capsularis76.39e-45 159
LLPS-Mae-0284Manihot esculenta75.196e-47 164
LLPS-Thc-1603Theobroma cacao73.683e-46 163
LLPS-Pot-1374Populus trichocarpa72.933e-45 160
LLPS-Php-0945Physcomitrella patens69.772e-36 136
LLPS-Mua-2040Musa acuminata67.672e-44 157
LLPS-Amt-1718Amborella trichopoda66.287e-34 128
LLPS-Sem-1113Selaginella moellendorffii65.123e-32 120
LLPS-Sot-1055Solanum tuberosum63.953e-32 125
LLPS-Brd-1173Brachypodium distachyon60.471e-28 114
LLPS-Nia-1643Nicotiana attenuata60.01e-28 115
LLPS-Tar-1526Takifugu rubripes60.01e-1266.6
LLPS-Tra-2625Triticum aestivum58.142e-28 113
LLPS-Hov-1524Hordeum vulgare58.143e-28 113
LLPS-Icp-2699Ictalurus punctatus58.01e-1164.7
LLPS-Sol-0516Solanum lycopersicum57.655e-29 114
LLPS-Cis-2029Ciona savignyi55.688e-2295.9
LLPS-Cii-2326Ciona intestinalis55.689e-2398.6
LLPS-Chr-0765Chlamydomonas reinhardtii53.495e-25 105
LLPS-Dar-0818Danio rerio50.08e-2296.3
LLPS-Xim-2438Xiphophorus maculatus50.02e-2194.7
LLPS-Asm-0693Astyanax mexicanus50.05e-2297.1
LLPS-Orl-2543Oryzias latipes50.03e-2194.7
LLPS-Orn-2402Oreochromis niloticus47.782e-1989.4
LLPS-Pof-1447Poecilia formosa47.784e-2091.7
LLPS-Nol-3967Nomascus leucogenys47.736e-2194.0
LLPS-Ict-3490Ictidomys tridecemlineatus47.736e-2194.0
LLPS-Gaga-0188Gallus gallus47.734e-2194.4
LLPS-Mam-3326Macaca mulatta47.736e-2194.0
LLPS-Cap-4696Cavia porcellus47.736e-2194.0
LLPS-Eqc-2294Equus caballus47.737e-2194.0
LLPS-Poa-0185Pongo abelii47.736e-2194.0
LLPS-Rhb-1164Rhinopithecus bieti47.736e-2194.0
LLPS-Orc-0794Oryctolagus cuniculus47.735e-2192.0
LLPS-Man-0032Macaca nemestrina47.736e-2194.0
LLPS-Scm-2205Scophthalmus maximus47.736e-2193.6
LLPS-Fec-2805Felis catus47.737e-2194.0
LLPS-Hos-1688Homo sapiens47.736e-2194.0
LLPS-Pap-1006Pan paniscus47.736e-2194.0
LLPS-Pat-1620Pan troglodytes47.736e-2194.0
LLPS-Ova-2851Ovis aries47.734e-2194.7
LLPS-Mup-2175Mustela putorius furo47.737e-2194.0
LLPS-Mal-4411Mandrillus leucophaeus47.736e-2194.0
LLPS-Paa-2471Papio anubis47.736e-2194.0
LLPS-Ran-0395Rattus norvegicus47.734e-2192.4
LLPS-Scf-3773Scleropages formosus47.731e-2093.2
LLPS-Bot-1635Bos taurus47.735e-2192.8
LLPS-Dio-3065Dipodomys ordii47.735e-2194.0
LLPS-Tut-0082Tursiops truncatus47.733e-2194.7
LLPS-Caj-4255Callithrix jacchus47.735e-2194.0
LLPS-Gog-2220Gorilla gorilla47.736e-2194.0
LLPS-Sus-2078Sus scrofa47.736e-2194.0
LLPS-Cea-3134Cercocebus atys47.736e-2194.0
LLPS-Mum-0646Mus musculus47.736e-2194.0
LLPS-Maf-1974Macaca fascicularis47.736e-2194.0
LLPS-Mea-0826Mesocricetus auratus47.736e-2194.0
LLPS-Xet-0814Xenopus tropicalis47.372e-1268.6
LLPS-Ten-1830Tetraodon nigroviridis47.374e-1370.9
LLPS-Lac-0009Latimeria chalumnae47.377e-1370.1
LLPS-Gaa-0398Gasterosteus aculeatus47.372e-1371.2
LLPS-Drm-1144Drosophila melanogaster47.372e-1370.9
LLPS-Leo-0469Lepisosteus oculatus47.371e-1269.3
LLPS-Ere-0559Erinaceus europaeus47.194e-1885.5
LLPS-Pes-3513Pelodiscus sinensis46.674e-1679.3
LLPS-Otg-0631Otolemur garnettii46.672e-1988.6
LLPS-Loa-0076Loxodonta africana46.673e-1989.0
LLPS-Myl-1880Myotis lucifugus46.674e-1988.6
LLPS-Aim-0055Ailuropoda melanoleuca46.674e-1988.6
LLPS-Fud-0375Fukomys damarensis46.482e-1165.5
LLPS-Mod-2314Monodelphis domestica46.072e-1885.5
LLPS-Tag-0429Taeniopygia guttata46.052e-1268.6
LLPS-Anc-0330Anolis carolinensis46.054e-1267.8
LLPS-Caf-0987Canis familiaris46.054e-1267.8
LLPS-Fia-1326Ficedula albicollis46.055e-1267.8
LLPS-Anp-1320Anas platyrhynchos46.053e-1680.1
LLPS-Meg-3329Meleagris gallopavo46.053e-1680.1
LLPS-Aon-0004Aotus nancymaae46.056e-1267.4
LLPS-Ora-1191Ornithorhynchus anatinus46.057e-1368.2
LLPS-Chs-1462Chlorocebus sabaeus46.056e-1267.4
LLPS-Vir-0157Vigna radiata45.694e-25 105
LLPS-Cas-0452Carlito syrichta44.325e-1782.4
LLPS-Osl-0783Ostreococcus lucimarinus42.051e-1061.6
LLPS-Cae-0425Caenorhabditis elegans40.791e-1166.2