LLPS-Met-0719
25486321
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Putative DNA helicase |
| Gene Name: | 25486321, MTR_2g031620, MtrunA17_Chr2g0293211 |
| Ensembl Gene: | MTR_2g031620 |
| Ensembl Protein: | KEH37090 |
| Organism: | Medicago truncatula |
| Taxa ID: | 3880 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | KEH37090 | KEH37090 |
| UniProt | A0A072VFY7, A0A072VFY7_MEDTR | |
| GeneBank | PSQE01000002, CM001218 | KEH37090.1, RHN72945.1 |
| RefSeq | XM_013607591.1 | XP_013463045.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MRFRYPHAVV PLFSTMNTQT LSNSTPFSNL QKSLFLQTRF FQPKRPFFTV FCSKRASKFP 60 61 PLPLKTNGYH GVSTAKVPRP VHLEENSMES QFDILKKKLE VVGMDTGICV PGQNNHLLCP 120 121 KCQGGDTLEK SLSIYIAPDG GSAAWVCFRG KCGWQGSTQV FADSNSYSKS MKKLKPTKKK 180 181 RELKEEDLQL EPLCDELVGY FSERLISKET LQRNGVMQRK YDDQIVIVFT YRRNGALISC 240 241 KYRDVNKKFW QEADTEKIFY GLDDIVGESD VIIVEGEMDK LAMEEAGFRN CISVPDGAPP 300 301 SVSSKELPPL EQDTKYQYLW NCKDELKKAS RIILATDGDP PGQALSEELA RRFGKEKCWR 360 361 VRWPKKGKSD DCKDANEVLM YLGPDALKEV IENAELYPIR GLFNFRDYFD EIDAYYHRTL 420 421 GYDSGLSTGW NNLNGLYNIV PGELTIVTGV PNSGKSEWID ALLCNLNQSA GWKFALCSME 480 481 NKVREHARKL LEKHVKKPFF NDRYAEDAER MSLEEYEEGK LWLNDTFYLI RCENDALPNI 540 541 KWVLDLAKAA VLRHGVRGLV IDPYNELDHQ RPPNMTETEY VSQMLTLIKR FAQHHGCHVW 600 601 FVAHPRQLHN WVGGPPNLYD ISGSAHFINK CDNGIVIHRN RDPEAGPVDQ VQVCVRKVRN 660 661 KVAGTIGEAA LFYNRVTGEY SEDDRKR 687 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCGTTTTC GTTATCCACA CGCTGTAGTT CCATTATTCT CCACTATGAA CACTCAAACC 60 61 CTCTCCAATT CAACCCCTTT TTCAAACCTT CAAAAATCAC TTTTTCTTCA AACGCGTTTT 120 121 TTTCAACCTA AAAGACCTTT TTTTACTGTT TTTTGTTCTA AACGTGCTTC AAAGTTTCCT 180 181 CCTTTACCGC TTAAAACTAA TGGGTATCAT GGTGTTTCAA CTGCTAAGGT TCCTAGACCA 240 241 GTTCATTTGG AAGAGAATAG TATGGAGAGC CAGTTTGATA TTTTAAAGAA GAAATTGGAA 300 301 GTTGTTGGAA TGGATACTGG AATCTGTGTT CCTGGTCAAA ACAATCATTT GCTTTGTCCT 360 361 AAGTGCCAAG GTGGTGACAC GTTAGAAAAG AGCTTATCTA TTTACATTGC ACCAGACGGG 420 421 GGGTCTGCTG CATGGGTGTG TTTTCGCGGA AAGTGTGGTT GGCAAGGCAG CACCCAGGTC 480 481 TTTGCTGATA GCAATTCATA TTCTAAGTCA ATGAAAAAAT TAAAACCTAC TAAGAAAAAA 540 541 AGAGAACTTA AGGAGGAGGA CCTGCAACTA GAACCACTTT GTGATGAGCT GGTCGGATAT 600 601 TTTTCAGAGC GCTTGATTTC GAAGGAGACT CTGCAGAGAA ATGGTGTGAT GCAGAGAAAA 660 661 TATGATGATC AGATTGTTAT TGTATTCACA TATCGTCGTA ATGGAGCGCT TATTAGTTGC 720 721 AAGTACAGAG ACGTCAACAA AAAGTTTTGG CAGGAAGCAG ACACTGAAAA GATCTTTTAT 780 781 GGATTGGATG ACATAGTTGG AGAAAGTGAT GTTATCATTG TTGAAGGTGA AATGGACAAG 840 841 CTGGCAATGG AAGAAGCTGG CTTCCGAAAT TGTATCAGTG TTCCTGACGG CGCACCTCCA 900 901 TCAGTCTCTT CAAAGGAGTT GCCACCTCTG GAACAGGACA CGAAGTATCA GTATCTGTGG 960 961 AATTGCAAAG ATGAACTAAA GAAGGCATCC CGGATCATCC TTGCCACTGA TGGCGATCCA 1020 1021 CCTGGTCAAG CTTTGTCTGA GGAGCTTGCA CGCCGTTTTG GGAAAGAAAA ATGCTGGCGT 1080 1081 GTAAGGTGGC CCAAAAAAGG GAAGTCTGAT GATTGCAAAG ATGCAAATGA GGTTCTCATG 1140 1141 TATTTGGGCC CTGATGCACT GAAGGAAGTG ATTGAGAATG CAGAACTATA TCCTATACGT 1200 1201 GGATTGTTTA ACTTCAGAGA TTACTTTGAT GAGATTGATG CATATTATCA TCGAACTTTG 1260 1261 GGATATGACT CTGGTCTCTC AACTGGCTGG AATAATCTGA ATGGGTTATA CAATATTGTA 1320 1321 CCGGGAGAAC TGACCATAGT AACTGGAGTT CCAAATTCGG GGAAGAGTGA GTGGATTGAT 1380 1381 GCTCTTCTTT GCAATCTTAA TCAAAGTGCT GGCTGGAAAT TTGCACTTTG TTCCATGGAG 1440 1441 AATAAGGTTA GAGAACATGC TCGAAAACTT TTGGAGAAAC ATGTGAAAAA GCCTTTCTTT 1500 1501 AATGATCGCT ATGCTGAAGA CGCTGAGCGG ATGAGTTTGG AGGAATATGA AGAAGGCAAG 1560 1561 CTCTGGTTAA ATGATACTTT TTATCTCATA AGGTGTGAAA ATGATGCTCT TCCAAATATA 1620 1621 AAGTGGGTTC TTGACCTTGC AAAAGCAGCT GTATTAAGAC ACGGGGTGCG TGGACTTGTA 1680 1681 ATTGATCCTT ATAATGAGCT TGATCATCAG CGACCTCCAA ATATGACGGA AACTGAATAT 1740 1741 GTGAGCCAGA TGCTTACCTT AATTAAACGC TTTGCCCAAC ATCATGGATG CCATGTTTGG 1800 1801 TTTGTAGCAC ATCCCAGGCA GCTGCACAAT TGGGTTGGGG GTCCTCCTAA TCTTTATGAT 1860 1861 ATAAGTGGAA GTGCACACTT TATAAATAAG TGTGACAATG GAATTGTTAT TCATCGTAAT 1920 1921 CGGGATCCTG AGGCGGGCCC TGTTGATCAA GTGCAGGTCT GTGTCCGAAA GGTAAGAAAT 1980 1981 AAGGTCGCAG GGACGATAGG TGAGGCTGCA TTGTTCTATA ACAGGGTAAC TGGTGAGTAC 2040 2041 TCCGAAGATG ATAGAAAGAG ATAG 2064 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Via-1092 | Vigna angularis | 80.39 | 0.0 | 1122 |
| LLPS-Glm-0458 | Glycine max | 80.0 | 0.0 | 1151 |
| LLPS-Ors-2369 | Oryza sativa | 79.8 | 2e-114 | 350 |
| LLPS-Phv-2086 | Phaseolus vulgaris | 79.39 | 0.0 | 1160 |
| LLPS-Mae-1801 | Manihot esculenta | 74.02 | 0.0 | 988 |
| LLPS-Prp-0889 | Prunus persica | 72.07 | 0.0 | 979 |
| LLPS-Cus-1129 | Cucumis sativus | 70.93 | 0.0 | 926 |
| LLPS-Sol-2425 | Solanum lycopersicum | 70.84 | 0.0 | 957 |
| LLPS-Orbr-1350 | Oryza brachyantha | 70.52 | 0.0 | 847 |
| LLPS-Pot-0986 | Populus trichocarpa | 69.78 | 0.0 | 951 |
| LLPS-Viv-2020 | Vitis vinifera | 69.47 | 0.0 | 941 |
| LLPS-Brd-0365 | Brachypodium distachyon | 69.42 | 0.0 | 833 |
| LLPS-Thc-2106 | Theobroma cacao | 69.09 | 0.0 | 957 |
| LLPS-Sei-2437 | Setaria italica | 67.31 | 0.0 | 856 |
| LLPS-Hov-1360 | Hordeum vulgare | 67.22 | 0.0 | 848 |
| LLPS-Tra-0217 | Triticum aestivum | 67.21 | 0.0 | 851 |
| LLPS-Coc-2265 | Corchorus capsularis | 66.92 | 0.0 | 934 |
| LLPS-Hea-1009 | Helianthus annuus | 65.41 | 0.0 | 907 |
| LLPS-Amt-1485 | Amborella trichopoda | 65.37 | 0.0 | 874 |
| LLPS-Orgl-2046 | Oryza glumaepatula | 65.11 | 0.0 | 847 |
| LLPS-Gor-1795 | Gossypium raimondii | 63.82 | 0.0 | 906 |
| LLPS-Art-1430 | Arabidopsis thaliana | 63.81 | 0.0 | 840 |
| LLPS-Brr-2190 | Brassica rapa | 63.55 | 0.0 | 852 |
| LLPS-Ori-0684 | Oryza indica | 63.4 | 0.0 | 815 |
| LLPS-Zem-2210 | Zea mays | 63.37 | 0.0 | 841 |
| LLPS-Mua-0161 | Musa acuminata | 63.06 | 0.0 | 834 |
| LLPS-Sob-1628 | Sorghum bicolor | 62.46 | 0.0 | 830 |
| LLPS-Bro-2647 | Brassica oleracea | 62.46 | 0.0 | 858 |
| LLPS-Brn-3388 | Brassica napus | 62.46 | 0.0 | 858 |
| LLPS-Lep-1823 | Leersia perrieri | 62.16 | 0.0 | 747 |
| LLPS-Orni-1975 | Oryza nivara | 61.68 | 0.0 | 780 |
| LLPS-Php-1004 | Physcomitrella patens | 61.67 | 0.0 | 727 |
| LLPS-Orm-1122 | Oryza meridionalis | 61.53 | 0.0 | 780 |
| LLPS-Orb-2257 | Oryza barthii | 61.53 | 0.0 | 779 |
| LLPS-Dac-1614 | Daucus carota | 61.48 | 0.0 | 821 |
| LLPS-Orp-1810 | Oryza punctata | 61.04 | 0.0 | 757 |
| LLPS-Orr-0528 | Oryza rufipogon | 58.41 | 0.0 | 718 |
| LLPS-Sem-0827 | Selaginella moellendorffii | 58.12 | 0.0 | 683 |
| LLPS-Arl-0779 | Arabidopsis lyrata | 56.58 | 0.0 | 779 |
| LLPS-Osl-0114 | Ostreococcus lucimarinus | 54.1 | 0.0 | 635 |
| LLPS-Nia-2090 | Nicotiana attenuata | 52.48 | 3e-108 | 340 |
| LLPS-Sot-1315 | Solanum tuberosum | 49.57 | 2e-103 | 327 |
| LLPS-Chr-0986 | Chlamydomonas reinhardtii | 45.51 | 9e-83 | 292 |
| LLPS-Xet-3357 | Xenopus tropicalis | 25.35 | 1e-11 | 72.4 |
| LLPS-Lac-2801 | Latimeria chalumnae | 24.94 | 5e-09 | 63.9 |
| LLPS-Cym-0890 | Cyanidioschyzon merolae | 24.75 | 2e-10 | 68.6 |
| LLPS-Fia-3674 | Ficedula albicollis | 24.55 | 1e-08 | 62.8 |
| LLPS-Leo-1499 | Lepisosteus oculatus | 24.17 | 6e-11 | 70.1 |
| LLPS-Pes-2380 | Pelodiscus sinensis | 24.12 | 5e-08 | 60.5 |
| LLPS-Orn-2939 | Oreochromis niloticus | 23.86 | 2e-12 | 74.7 |
| LLPS-Ten-3389 | Tetraodon nigroviridis | 23.75 | 3e-12 | 73.9 |
| LLPS-Scf-0457 | Scleropages formosus | 23.68 | 3e-10 | 67.4 |
| LLPS-Dio-4172 | Dipodomys ordii | 23.58 | 5e-08 | 60.5 |
| LLPS-Cas-1740 | Carlito syrichta | 23.36 | 3e-07 | 58.2 |
| LLPS-Mod-4315 | Monodelphis domestica | 23.35 | 4e-07 | 57.8 |
| LLPS-Gaa-2725 | Gasterosteus aculeatus | 23.31 | 6e-11 | 69.7 |
| LLPS-Asm-0997 | Astyanax mexicanus | 23.2 | 3e-12 | 74.3 |
| LLPS-Dar-4130 | Danio rerio | 23.06 | 3e-11 | 70.9 |
| LLPS-Orl-0185 | Oryzias latipes | 22.99 | 4e-12 | 73.9 |
| LLPS-Pof-0396 | Poecilia formosa | 22.94 | 4e-12 | 73.9 |
| LLPS-Scm-2721 | Scophthalmus maximus | 22.91 | 4e-12 | 73.9 |
| LLPS-Fec-2307 | Felis catus | 22.82 | 1e-07 | 59.3 |
| LLPS-Xim-0459 | Xiphophorus maculatus | 22.75 | 2e-11 | 71.6 |
| LLPS-Gaga-3925 | Gallus gallus | 22.55 | 2e-09 | 64.7 |
| LLPS-Tar-3686 | Takifugu rubripes | 22.55 | 2e-11 | 72.0 |
| LLPS-Icp-0526 | Ictalurus punctatus | 22.44 | 1e-10 | 68.9 |