LLPS-Loa-2046
RNF40
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | E3 ubiquitin protein ligase |
Gene Name: | RNF40 |
Ensembl Gene: | ENSLAFG00000010361.4 |
Ensembl Protein: | ENSLAFP00000008678.4 |
Organism: | Loxodonta africana |
Taxa ID: | 9785 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus, PML nuclear body | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSLAFT00000010362.4 | ENSLAFP00000008678.4 |
UniProt | G3T5G8, G3T5G8_LOXAF | |
RefSeq | XM_003418858.2 | XP_003418906.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MSGPGNKRAA GDGGSGPPEK KLSREEKTTT TLIEPIRLGG ISSTEEMDLK VLQFKNKKLA 60 61 ERLEQRQACE DELRERIEKL EKRQATDDAT LLIVNRYWAQ LDETVEALLR RHESQGELSS 120 121 GTEAPGTQEG PIHDGTPLTE PGTSEPREPL PMQLRPPLSE PALAFVVALG ASSNEEVELQ 180 181 LQGRMEFSKA AVSRVVEASD RLQRQVEELC QRVYSRGDNE PPSEVVQART RELGRENRRL 240 241 QDLATQLQEK HHRISLEYSE LQDKVTSAET KVLEMETTVE DLQWDIEKLR KREQKLNKHL 300 301 AEALEQLNSG YYVSGSSSGF QGGQITLSMQ KFEMLNAELE ENQELANSRM AELEKLQTEL 360 361 QGAVRTNERL KVALRSLPEE VVRETGEYRM LQAQFSLLYN ESLQVKTQLD EARGLLLATK 420 421 NSHLRHIEHM ESDELGLQKK LRTEVIQLED TLAQVRKEYE MLRIEFEQNL AANEQAGPIN 480 481 REMRHLISSL QNHNHQLKGD AQRYKRKLRE VQAEIGKLRA QASGSTHSIP NLGHPEDSSL 540 541 SAPAPGKEEG GPGPGGAPDS RKEMTSVPGA TITASSVRKE ELVSSEEDAQ ALTPGAQGPS 600 601 SRGRELESRP KRELREREGP GLGPPSAASA LSRVDREKAK VEEAKRKESE LLKGLRAELK 660 661 KAQESQKEMK LLLDMYKSAP KEQRDKVQLM AAERKAKAEV DELRSRIREL EERDRRESKK 720 721 IADEDALRRI RQAEEQIEHL QRKLGATKQE EEALLSEMDV TGQAFEDMQE QNGRLLQQLR 780 781 EKDDANFKLM SERIKANQIH KLLREEKDEL GEQVLGLKSQ VDAQLLTVQK LEEKERALQG 840 841 SLGGVEKELT LRSQALELNK RKAVEAAQLA EDLKVQLEHV QTRLREIQPC LAESRAAREK 900 901 ESFNLKRAQE DISRLRRKLE KQRKVEVYAD ADEILQEEIK EYKARLTCPC CNTRKKDAVL 960 961 TKCFHVFCFE CVRGRYEARQ RKCPKCNAAF GAHDFHRVYI S 1001 |
Nucleotide CDS Sequence (FASTA) |
1 ATGTCTGGGC CCGGCAACAA ACGCGCCGCC GGAGATGGGG GCTCAGGGCC CCCGGAGAAG 60 61 AAGCTGAGCC GCGAGGAGAA GACCACGACC ACTCTCATAG AGCCTATTCG CCTTGGGGGC 120 121 ATCTCTTCCA CGGAAGAGAT GGACCTGAAG GTACTGCAGT TCAAGAACAA GAAACTAGCT 180 181 GAGCGGTTGG AGCAGCGGCA GGCTTGTGAA GATGAACTCC GAGAAAGAAT TGAGAAGCTA 240 241 GAGAAGCGGC AGGCCACAGA TGATGCCACA CTCCTCATCG TCAATCGCTA TTGGGCCCAG 300 301 CTGGATGAAA CTGTGGAAGC CCTTCTTCGT CGTCATGAGA GCCAGGGGGA GCTGTCTTCA 360 361 GGGACAGAGG CACCTGGAAC CCAAGAGGGG CCGATACATG ATGGGACCCC TCTGACAGAG 420 421 CCAGGGACGT CAGAGCCGAG GGAGCCTCTG CCAATGCAGC TGCGACCCCC TCTGAGTGAG 480 481 CCAGCCTTGG CTTTTGTGGT GGCACTGGGC GCCAGCAGCA ATGAGGAGGT GGAGCTGCAG 540 541 CTGCAGGGCC GTATGGAGTT CTCCAAGGCC GCAGTATCCC GTGTCGTAGA GGCCTCAGAC 600 601 CGATTGCAGC GCCAAGTGGA AGAACTCTGT CAGCGAGTAT ACAGCCGAGG GGACAATGAG 660 661 CCCCCCAGTG AGGTGGTTCA GGCACGCACT CGGGAGCTGG GCCGTGAGAA CCGGCGACTA 720 721 CAGGACTTGG CCACCCAGCT GCAGGAGAAG CATCACCGCA TCTCATTGGA GTACTCCGAG 780 781 CTCCAGGATA AAGTGACTTC GGCAGAGACG AAGGTGCTGG AGATGGAGAC AACGGTGGAG 840 841 GACCTGCAGT GGGACATAGA GAAGTTGCGC AAGCGAGAGC AGAAGCTCAA TAAGCACCTG 900 901 GCGGAAGCCT TGGAGCAGCT CAACTCTGGA TACTATGTGT CTGGGAGCTC CTCGGGCTTC 960 961 CAGGGTGGCC AGATCACACT CAGCATGCAA AAGTTTGAGA TGCTGAATGC GGAGTTGGAG 1020 1021 GAAAACCAGG AATTGGCCAA CAGCCGCATG GCAGAACTGG AGAAACTACA GACTGAACTA 1080 1081 CAGGGGGCTG TGCGGACCAA TGAGCGTCTC AAGGTAGCCC TACGGAGTCT TCCAGAAGAG 1140 1141 GTGGTGCGAG AGACGGGGGA ATATCGTATG CTGCAGGCCC AGTTTTCTCT GCTCTATAAT 1200 1201 GAGTCTCTCC AAGTGAAGAC CCAGCTGGAT GAGGCCCGGG GGCTGCTGCT GGCCACCAAG 1260 1261 AACTCCCACC TGAGACACAT CGAGCACATG GAGAGCGACG AGCTGGGGCT GCAGAAGAAG 1320 1321 CTGCGCACAG AGGTTATCCA GCTGGAGGAC ACGCTGGCCC AGGTACGCAA GGAGTACGAG 1380 1381 ATGCTGCGCA TCGAGTTTGA ACAGAACCTG GCAGCCAACG AGCAGGCGGG GCCCATCAAC 1440 1441 CGAGAGATGC GCCACCTGAT CAGCAGCCTC CAAAACCACA ACCACCAGCT GAAGGGGGAC 1500 1501 GCCCAGCGCT ATAAGCGGAA GCTGCGGGAG GTACAGGCTG AGATTGGCAA GCTTCGGGCC 1560 1561 CAGGCCAGCG GCTCTACCCA CTCCATCCCT AACTTGGGCC ATCCAGAGGA CTCCAGCCTC 1620 1621 AGTGCCCCAG CCCCAGGAAA AGAAGAGGGT GGGCCAGGCC CTGGTGGTGC CCCTGACAGC 1680 1681 AGGAAAGAGA TGACTTCAGT GCCTGGCGCC ACCATAACTG CCTCATCAGT GAGGAAGGAG 1740 1741 GAACTGGTCT CCTCTGAGGA GGATGCCCAG GCCCTAACCC CTGGGGCCCA GGGCCCCTCC 1800 1801 TCACGGGGCC GAGAACTTGA GAGCAGGCCC AAGCGGGAGC TTCGAGAACG GGAAGGGCCT 1860 1861 GGCCTTGGAC CCCCATCTGC AGCCTCAGCT CTCTCAAGGG TTGACCGCGA GAAGGCCAAA 1920 1921 GTAGAAGAAG CCAAGAGGAA GGAGTCAGAG CTCCTCAAGG GTCTCCGAGC AGAGCTCAAG 1980 1981 AAGGCCCAGG AGAGCCAGAA GGAGATGAAG CTGCTGCTGG ATATGTACAA GTCAGCACCC 2040 2041 AAGGAGCAGC GGGATAAGGT GCAGCTCATG GCAGCAGAAC GCAAGGCCAA GGCAGAGGTG 2100 2101 GATGAGCTAC GGAGCCGCAT CCGGGAATTA GAGGAGAGGG ATCGGAGGGA GAGCAAGAAG 2160 2161 ATTGCGGATG AGGATGCCCT GCGGCGCATT CGGCAGGCAG AGGAGCAGAT AGAGCACCTG 2220 2221 CAGCGCAAGT TGGGTGCCAC AAAGCAGGAA GAGGAGGCGC TGCTGTCAGA GATGGATGTG 2280 2281 ACAGGTCAGG CTTTTGAAGA CATGCAGGAG CAGAACGGGC GGCTGCTACA GCAGCTACGG 2340 2341 GAAAAGGACG ATGCCAACTT TAAGCTGATG TCTGAGCGGA TCAAGGCCAA CCAGATTCAC 2400 2401 AAGCTCCTGC GGGAGGAGAA GGATGAGCTG GGTGAGCAGG TTCTTGGCCT CAAGTCCCAG 2460 2461 GTGGATGCCC AGCTCCTGAC CGTGCAGAAG CTAGAGGAAA AGGAGCGGGC CTTGCAGGGC 2520 2521 AGCCTGGGGG GTGTGGAGAA GGAGCTGACA CTACGTAGTC AGGCCCTGGA GCTCAATAAA 2580 2581 AGGAAGGCTG TGGAAGCAGC CCAGCTGGCT GAGGACCTAA AGGTGCAGCT GGAGCACGTG 2640 2641 CAGACACGGC TACGAGAGAT CCAGCCCTGC TTGGCGGAGA GCCGGGCTGC TCGTGAGAAA 2700 2701 GAGAGCTTCA ACCTCAAGAG GGCTCAGGAG GACATCTCAC GGCTGCGGCG CAAGTTGGAG 2760 2761 AAGCAGAGGA AGGTGGAGGT TTATGCAGAT GCTGATGAAA TCCTCCAGGA GGAGATCAAG 2820 2821 GAGTACAAGG CGCGGTTGAC CTGTCCCTGC TGTAACACCC GCAAGAAGGA TGCAGTGCTT 2880 2881 ACCAAGTGCT TCCACGTTTT CTGCTTCGAG TGCGTGCGGG GCCGCTATGA GGCACGCCAG 2940 2941 AGGAAGTGCC CCAAGTGCAA CGCAGCCTTT GGTGCCCACG ACTTCCACCG TGTCTACATC 3000 3001 AGCTGA 3006 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Aim-3289 | Ailuropoda melanoleuca | 97.1 | 0.0 | 1736 |
LLPS-Caf-1654 | Canis familiaris | 96.7 | 0.0 | 1729 |
LLPS-Eqc-0582 | Equus caballus | 96.6 | 0.0 | 1722 |
LLPS-Urm-3232 | Ursus maritimus | 96.52 | 0.0 | 1582 |
LLPS-Ict-0523 | Ictidomys tridecemlineatus | 96.5 | 0.0 | 1720 |
LLPS-Fec-3050 | Felis catus | 96.5 | 0.0 | 1721 |
LLPS-Ova-1719 | Ovis aries | 96.4 | 0.0 | 1723 |
LLPS-Bot-3882 | Bos taurus | 96.3 | 0.0 | 1726 |
LLPS-Mup-2984 | Mustela putorius furo | 96.2 | 0.0 | 1715 |
LLPS-Tut-0582 | Tursiops truncatus | 96.12 | 0.0 | 1691 |
LLPS-Poa-2222 | Pongo abelii | 96.0 | 0.0 | 1705 |
LLPS-Pap-1352 | Pan paniscus | 96.0 | 0.0 | 1702 |
LLPS-Pat-1147 | Pan troglodytes | 96.0 | 0.0 | 1702 |
LLPS-Sus-0007 | Sus scrofa | 95.9 | 0.0 | 1715 |
LLPS-Orc-2153 | Oryctolagus cuniculus | 95.9 | 0.0 | 1706 |
LLPS-Cas-0786 | Carlito syrichta | 95.81 | 0.0 | 1712 |
LLPS-Chs-1025 | Chlorocebus sabaeus | 95.8 | 0.0 | 1669 |
LLPS-Rhb-1148 | Rhinopithecus bieti | 95.8 | 0.0 | 1671 |
LLPS-Nol-0482 | Nomascus leucogenys | 95.73 | 0.0 | 863 |
LLPS-Paa-1862 | Papio anubis | 95.7 | 0.0 | 1671 |
LLPS-Mal-1230 | Mandrillus leucophaeus | 95.7 | 0.0 | 1671 |
LLPS-Maf-0870 | Macaca fascicularis | 95.7 | 0.0 | 1667 |
LLPS-Fud-0608 | Fukomys damarensis | 95.7 | 0.0 | 1708 |
LLPS-Gog-2925 | Gorilla gorilla | 95.7 | 0.0 | 1699 |
LLPS-Mam-1600 | Macaca mulatta | 95.7 | 0.0 | 1667 |
LLPS-Myl-0400 | Myotis lucifugus | 95.5 | 0.0 | 1697 |
LLPS-Hos-0347 | Homo sapiens | 95.5 | 0.0 | 1695 |
LLPS-Man-3407 | Macaca nemestrina | 95.4 | 0.0 | 1662 |
LLPS-Caj-2240 | Callithrix jacchus | 95.1 | 0.0 | 1686 |
LLPS-Aon-0755 | Aotus nancymaae | 94.91 | 0.0 | 1671 |
LLPS-Cap-3961 | Cavia porcellus | 94.91 | 0.0 | 1689 |
LLPS-Mea-0841 | Mesocricetus auratus | 94.71 | 0.0 | 1680 |
LLPS-Cea-2348 | Cercocebus atys | 94.19 | 0.0 | 1588 |
LLPS-Ran-2707 | Rattus norvegicus | 93.41 | 0.0 | 1654 |
LLPS-Mum-2768 | Mus musculus | 93.01 | 0.0 | 1645 |
LLPS-Dio-0296 | Dipodomys ordii | 91.81 | 0.0 | 1649 |
LLPS-Ora-3316 | Ornithorhynchus anatinus | 90.3 | 7e-142 | 454 |
LLPS-Otg-1484 | Otolemur garnettii | 89.97 | 0.0 | 1610 |
LLPS-Anc-1806 | Anolis carolinensis | 87.82 | 0.0 | 596 |
LLPS-Pes-3445 | Pelodiscus sinensis | 86.67 | 4e-78 | 258 |
LLPS-Sah-1844 | Sarcophilus harrisii | 84.91 | 0.0 | 1493 |
LLPS-Lac-2713 | Latimeria chalumnae | 84.7 | 0.0 | 583 |
LLPS-Mod-2018 | Monodelphis domestica | 84.52 | 0.0 | 1485 |
LLPS-Fia-3343 | Ficedula albicollis | 83.25 | 1e-93 | 302 |
LLPS-Xet-1092 | Xenopus tropicalis | 82.1 | 0.0 | 566 |
LLPS-Asm-3596 | Astyanax mexicanus | 81.59 | 2e-177 | 551 |
LLPS-Icp-3642 | Ictalurus punctatus | 81.3 | 3e-176 | 549 |
LLPS-Scm-0403 | Scophthalmus maximus | 81.02 | 3e-170 | 532 |
LLPS-Scf-0723 | Scleropages formosus | 80.74 | 8e-177 | 548 |
LLPS-Tar-2245 | Takifugu rubripes | 80.74 | 9e-170 | 531 |
LLPS-Ten-3424 | Tetraodon nigroviridis | 80.74 | 1e-169 | 529 |
LLPS-Dar-0323 | Danio rerio | 80.74 | 9e-176 | 546 |
LLPS-Orn-2735 | Oreochromis niloticus | 80.74 | 2e-170 | 533 |
LLPS-Gaa-1578 | Gasterosteus aculeatus | 80.4 | 7e-167 | 521 |
LLPS-Xim-1015 | Xiphophorus maculatus | 80.17 | 1e-167 | 525 |
LLPS-Orl-0438 | Oryzias latipes | 80.17 | 6e-170 | 531 |
LLPS-Cii-0300 | Ciona intestinalis | 78.02 | 8e-35 | 138 |
LLPS-Leo-2551 | Lepisosteus oculatus | 77.37 | 6e-70 | 241 |
LLPS-Gaga-2752 | Gallus gallus | 75.57 | 1e-155 | 494 |
LLPS-Meg-1119 | Meleagris gallopavo | 75.57 | 4e-156 | 494 |
LLPS-Tag-2933 | Taeniopygia guttata | 75.28 | 2e-156 | 494 |
LLPS-Anp-3271 | Anas platyrhynchos | 75.28 | 4e-156 | 494 |
LLPS-Pof-0427 | Poecilia formosa | 72.73 | 5e-147 | 471 |
LLPS-Cis-0171 | Ciona savignyi | 53.44 | 8e-110 | 370 |
LLPS-Orb-1201 | Oryza barthii | 51.52 | 3e-14 | 81.3 |
LLPS-Orni-2174 | Oryza nivara | 51.52 | 3e-14 | 81.6 |
LLPS-Orm-1332 | Oryza meridionalis | 51.52 | 4e-14 | 81.3 |
LLPS-Orr-0675 | Oryza rufipogon | 51.52 | 4e-14 | 81.3 |
LLPS-Org-0196 | Oryza glaberrima | 51.52 | 3e-14 | 81.6 |
LLPS-Drm-1769 | Drosophila melanogaster | 42.8 | 0.0 | 701 |
LLPS-Cogr-1156 | Colletotrichum graminicola | 42.31 | 2e-07 | 59.3 |
LLPS-Dos-1459 | Dothistroma septosporum | 39.34 | 4e-10 | 68.2 |
LLPS-Php-1943 | Physcomitrella patens | 37.7 | 3e-06 | 53.5 |
LLPS-Nia-2378 | Nicotiana attenuata | 36.19 | 5e-34 | 140 |
LLPS-Sei-0187 | Setaria italica | 35.53 | 3e-06 | 54.7 |
LLPS-Cus-1706 | Cucumis sativus | 35.46 | 1e-32 | 140 |
LLPS-Orgl-2024 | Oryza glumaepatula | 34.12 | 2e-27 | 123 |
LLPS-Cae-1645 | Caenorhabditis elegans | 33.69 | 2e-38 | 159 |
LLPS-Sol-1259 | Solanum lycopersicum | 33.61 | 5e-39 | 160 |
LLPS-Gor-2795 | Gossypium raimondii | 33.52 | 2e-36 | 152 |
LLPS-Arl-2007 | Arabidopsis lyrata | 33.2 | 8e-22 | 106 |
LLPS-Amt-2127 | Amborella trichopoda | 33.18 | 5e-14 | 77.4 |
LLPS-Thc-2344 | Theobroma cacao | 33.06 | 7e-37 | 154 |
LLPS-Zem-0054 | Zea mays | 32.84 | 4e-23 | 110 |
LLPS-Art-2690 | Arabidopsis thaliana | 32.5 | 2e-25 | 117 |
LLPS-Viv-1608 | Vitis vinifera | 32.36 | 1e-37 | 156 |
LLPS-Coc-0563 | Corchorus capsularis | 32.13 | 4e-32 | 139 |
LLPS-Sob-0639 | Sorghum bicolor | 31.92 | 3e-26 | 120 |
LLPS-Dac-0849 | Daucus carota | 31.89 | 2e-34 | 146 |
LLPS-Lep-0973 | Leersia perrieri | 31.58 | 3e-29 | 129 |
LLPS-Mae-2043 | Manihot esculenta | 31.32 | 6e-38 | 157 |
LLPS-Ori-0950 | Oryza indica | 31.13 | 3e-29 | 130 |
LLPS-Mua-1104 | Musa acuminata | 31.13 | 2e-39 | 156 |
LLPS-Ors-1889 | Oryza sativa | 31.13 | 3e-29 | 130 |
LLPS-Sem-1414 | Selaginella moellendorffii | 31.11 | 3e-37 | 155 |
LLPS-Pot-1369 | Populus trichocarpa | 31.11 | 3e-41 | 168 |
LLPS-Vir-0153 | Vigna radiata | 30.68 | 3e-31 | 136 |
LLPS-Prp-0748 | Prunus persica | 30.58 | 2e-37 | 156 |
LLPS-Hea-0232 | Helianthus annuus | 30.43 | 1e-35 | 150 |
LLPS-Chr-1151 | Chlamydomonas reinhardtii | 30.42 | 8e-21 | 102 |
LLPS-Pytr-1485 | Pyrenophora triticirepentis | 30.39 | 5e-11 | 70.9 |
LLPS-Cym-0038 | Cyanidioschyzon merolae | 30.3 | 5e-12 | 73.9 |
LLPS-Met-2277 | Medicago truncatula | 30.08 | 2e-30 | 133 |
LLPS-Miv-1272 | Microbotryum violaceum | 29.93 | 5e-21 | 103 |
LLPS-Orbr-0286 | Oryza brachyantha | 29.82 | 8e-29 | 128 |
LLPS-Bro-0341 | Brassica oleracea | 29.59 | 3e-30 | 133 |
LLPS-Brr-0819 | Brassica rapa | 29.32 | 4e-30 | 132 |
LLPS-Brd-0820 | Brachypodium distachyon | 29.24 | 5e-30 | 132 |
LLPS-Via-2023 | Vigna angularis | 29.05 | 8e-34 | 144 |
LLPS-Brn-0440 | Brassica napus | 29.04 | 6e-31 | 135 |
LLPS-Tra-2789 | Triticum aestivum | 28.46 | 5e-28 | 126 |
LLPS-Abg-1598 | Absidia glauca | 28.41 | 1e-26 | 121 |
LLPS-Hov-0832 | Hordeum vulgare | 28.37 | 1e-25 | 118 |
LLPS-Orp-0350 | Oryza punctata | 28.36 | 1e-11 | 73.6 |
LLPS-Mel-1429 | Melampsora laricipopulina | 28.25 | 7e-28 | 125 |
LLPS-Phv-1766 | Phaseolus vulgaris | 28.11 | 2e-32 | 140 |
LLPS-Glm-0741 | Glycine max | 28.1 | 3e-33 | 142 |
LLPS-Tru-1939 | Triticum urartu | 28.08 | 1e-27 | 124 |
LLPS-Phn-0634 | Phaeosphaeria nodorum | 27.52 | 4e-11 | 71.2 |
LLPS-Pug-0737 | Puccinia graminis | 27.51 | 2e-22 | 108 |
LLPS-Usm-0649 | Ustilago maydis | 27.34 | 1e-16 | 89.4 |
LLPS-Gas-1343 | Galdieria sulphuraria | 26.76 | 5e-13 | 77.4 |
LLPS-Yal-1325 | Yarrowia lipolytica | 26.76 | 1e-11 | 72.8 |
LLPS-Lem-0664 | Leptosphaeria maculans | 26.74 | 4e-12 | 74.7 |
LLPS-Nec-0296 | Neurospora crassa | 26.73 | 5e-09 | 64.7 |
LLPS-Asni-1500 | Aspergillus niger | 26.4 | 4e-14 | 81.3 |
LLPS-Crn-0545 | Cryptococcus neoformans | 26.3 | 2e-14 | 82.4 |
LLPS-Spr-1179 | Sporisorium reilianum | 25.89 | 2e-16 | 88.6 |
LLPS-Chc-1017 | Chondrus crispus | 25.44 | 1e-13 | 79.7 |
LLPS-Sac-1021 | Saccharomyces cerevisiae | 24.63 | 7e-14 | 80.1 |
LLPS-Asg-1357 | Ashbya gossypii | 24.52 | 4e-13 | 77.8 |
LLPS-Kop-1360 | Komagataella pastoris | 23.57 | 3e-08 | 62.0 |
LLPS-Trr-1343 | Trichoderma reesei | 23.44 | 3e-08 | 62.0 |
LLPS-Tum-0990 | Tuber melanosporum | 23.27 | 2e-10 | 69.3 |