LLPS-Leo-a277
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Vacuolar protein sorting-associated protein 29; Vesicle protein sorting 29 |
| Ensembl Gene: | ENSLOCG00000007274.1 |
| Ensembl Protein: | ENSLOCP00000008827.1 |
| Organism: | Lepisosteus oculatus |
| Taxa ID: | 7918 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Postsynaptic density | Predicted from orthologs | (View) |
▼ FUNCTION
| Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSLOCT00000008838.1 | ENSLOCP00000008827.1 |
| Ensembl | ENSLOCT00000008812.1 | ENSLOCP00000008801.1 |
| UniProt | W5MKB8, W5MKB8_LEPOC | |
| GeneBank | AHAT01005193 | |
| Entrez | 102694904 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 QAGHRLVLVL GDLHIPHRCN TLPAKFKKLL VPGKIQHILC TGNLCTKESY DYLKTLAGDV 60 61 HIVRGDFDEN LNYPEQKVVT VGQFKIGLIH GHQVIPWGDM ASLALLQRQL DVDILISGHT 120 121 HKFEAFENEN KFYINPGSAT GAYNALESNI IPSFVLMDIQ ASTVVTYVYQ LIGDDVKVER 180 181 IEYKKS 186 |
| Nucleotide CDS Sequence (FASTA) |
1 CAGGCTGGTC ACAGATTGGT ACTGGTGCTA GGAGACCTCC ACATCCCCCA TCGTTGCAAC 60 61 ACTCTGCCAG CCAAGTTCAA GAAGCTGCTG GTTCCTGGAA AGATCCAGCA CATCCTCTGT 120 121 ACTGGCAACT TGTGCACCAA GGAGAGCTAC GACTATCTGA AGACACTGGC TGGGGATGTG 180 181 CACATTGTCA GGGGAGACTT TGACGAGAAC CTAAACTATC CCGAGCAGAA AGTGGTGACA 240 241 GTCGGACAGT TCAAAATCGG CCTGATTCAT GGACACCAAG TCATCCCCTG GGGTGATATG 300 301 GCCAGTCTGG CCTTGCTGCA GAGACAGCTG GATGTGGACA TTCTCATCTC GGGACACACA 360 361 CACAAGTTTG AGGCATTTGA AAATGAGAAC AAATTCTACA TCAATCCTGG ATCAGCCACT 420 421 GGGGCTTACA ATGCTCTGGA AAGCAACATC ATCCCTTCCT TTGTGTTAAT GGACATCCAA 480 481 GCCTCAACGG TAGTAACCTA CGTCTACCAG CTCATCGGGG ATGATGTGAA GGTGGAAAGG 540 541 ATTGAATACA AGAAGTCCTA A 561 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Cytosol | |
Cellular Component | Endosome | |
Cellular Component | Retromer complex | |
Biological Process | Intracellular protein transport | |
Biological Process | Retrograde transport, endosome to Golgi |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Hos-a317 | Homo sapiens | 2e-131 | 376 | undefined |
| LLPS-Mum-a317 | Mus musculus | 4e-132 | 377 | undefined |