LLPS-Lac-a759
VPS39
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | VPS39, HOPS complex subunit |
| Gene Name: | VPS39 |
| Ensembl Gene: | ENSLACG00000006229.1 |
| Ensembl Protein: | ENSLACP00000007017.1 |
| Organism: | Latimeria chalumnae |
| Taxa ID: | 7897 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Postsynaptic density | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSLACT00000007076.1 | ENSLACP00000007017.1 |
| UniProt | H3ABJ6, H3ABJ6_LATCH | |
| GeneBank | AFYH01152222, AFYH01152216, AFYH01152217, AFYH01152214, AFYH01152223, AFYH01152221, AFYH01152220, AFYH01152215, AFYH01152218, AFYH01152219 | |
| Entrez | 102356608 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MHDAFEPVPI LEKLPLQIEC MAAWEEWLLV GTKPGHLLLY RIKKDAGSNR FEVTLEKSNK 60 61 NFSKKIQQIL VVSQFKILVS LLENNIYVHD LLTFQQITMV SKAKGATLFT CDLQYLDTGE 120 121 AMLRLCVAVR KKLQLYYWKD REFHELQGDF SVPDVPKSMA WCENSICVGF KRDYYLIRVD 180 181 GKGSIKELFP TGKQLEPLVT PLADRKVAVG QDDLTVVLNE EGVCTQKCAL NWTDIPSAME 240 241 HQPPYIIAVL PRYVEIRTFE PRLLVQSIEL QKPRFVTSGG FILIFVEIPH LLLTFTGFDM 300 301 QNDLQRGRKK FLIQASTEKM NDETDGDKKQ QIDHIQNLYA FNLFCQKRFI DSMQVFGKLG 360 361 TDPTHVIGLY PELLPSDYRK QIQYPNSIPT LSGAELEKAH LALIDYLTQK RNHLVKQLND 420 421 SDPSGTSPLM EGTPTIKSKK KLLQIIDTTL LKCYLHTNVA LVASLLRLEN NHCHIEESEL 480 481 VLKKAHKHSE LIILYEKKGL HHKALQVLLD QSKKANSPLK GHERTVQYLK FAGKENLKII 540 541 FEFAPWVLKA CPEDGLKIFT EDLPEVESLP RDQVLGFLTD DFKDLVIPYL EEHIILFYEE 600 601 TDSEFHNCLI QQYLEKVQVL MQEYLNSLPE DEIPVPAGRE EGELGEYRTK LLNILEISTY 660 661 YEPHVLISDF PFDGLREERA LLLGRMGKHE QALFIYVHVL KDIKMAEEYC HKHYDRNTDG 720 721 SKDVYLSLLR MYLSPPDVHR LGPIKMEMSE PQANLQAALQ VLELHHSKLD TTKAINLLPA 780 781 NTQIREIRVF LENVLEENAK KKRFSQVLKS LLHAEFLRAQ EQRIFHQQVK CIITEEKVCR 840 841 VCKKKIGNSA FARYPSGIVV HYFCCKDRSV CPAET 875 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCACGACG CTTTCGAACC GGTGCCGATC CTGGAGAAGC TGCCGCTGCA GATCGAGTGC 60 61 ATGGCGGCCT GGGAGGAATG GCTGCTTGTT GGAACCAAAC CAGGGCACCT TCTTCTGTAC 120 121 AGGATCAAGA AGGATGCAGG CAGCAACAGG TTTGAAGTCA CCCTGGAAAA ATCCAATAAG 180 181 AACTTCTCCA AGAAAATTCA GCAGATCTTA GTCGTTTCCC AGTTTAAAAT TCTGGTCAGC 240 241 CTCTTGGAAA ATAATATTTA TGTCCATGAC CTGTTGACCT TTCAACAAAT CACCATGGTT 300 301 TCCAAGGCCA AGGGGGCAAC ACTTTTCACA TGTGACCTGC AGTATTTGGA CACTGGTGAG 360 361 GCCATGCTAA GGCTGTGTGT GGCAGTAAGG AAGAAACTTC AGCTGTATTA CTGGAAAGAT 420 421 CGGGAGTTCC ATGAACTGCA GGGAGATTTC AGTGTTCCAG ATGTGCCCAA GTCCATGGCC 480 481 TGGTGCGAGA ACTCCATCTG CGTGGGGTTC AAGAGAGATT ATTACCTGAT CCGGGTGGAT 540 541 GGAAAGGGTT CAATAAAGGA GCTGTTCCCA ACGGGGAAGC AGCTGGAACC CCTGGTTACG 600 601 CCACTGGCGG ACAGGAAGGT GGCGGTGGGC CAGGATGACC TGACGGTGGT GCTGAACGAG 660 661 GAGGGGGTCT GCACGCAGAA GTGCGCCCTG AACTGGACGG ACATCCCCAG CGCTATGGAA 720 721 CATCAGCCTC CATACATCAT TGCGGTGCTC CCGCGCTACG TGGAGATCCG CACGTTTGAG 780 781 CCTCGCCTGT TGGTTCAGAG CATCGAGCTG CAGAAACCTC GCTTCGTCAC TTCTGGAGGT 840 841 TTTATATTAA TTTTTGTGGA GATTCCACAC CTCCTACTTA CTTTCACTGG TTTCGACATG 900 901 CAAAATGATT TACAAAGGGG AAGAAAAAAA TTCCTCATAC AGGCTTCCAC AGAGAAAATG 960 961 AATGATGAGA CAGACGGAGA CAAGAAGCAG CAAATCGATC ACATTCAGAA TCTCTACGCC 1020 1021 TTCAACCTTT TCTGTCAGAA ACGCTTCATC GACTCCATGC AGGTCTTTGG AAAACTTGGC 1080 1081 ACAGATCCGA CGCATGTGAT TGGATTGTAC CCTGAGCTCC TTCCTTCAGA CTACAGAAAG 1140 1141 CAGATTCAGT ACCCAAACAG CATCCCCACC CTGTCTGGGG CAGAGCTGGA GAAAGCCCAC 1200 1201 CTGGCTCTCA TTGACTACCT GACCCAGAAA CGAAATCACC TGGTGAAGCA GCTGAATGAC 1260 1261 TCGGACCCCT CTGGGACGTC GCCCCTGATG GAGGGGACGC CCACCATCAA ATCCAAGAAG 1320 1321 AAGCTGCTCC AGATCATCGA CACGACCCTC CTGAAGTGCT ACCTGCATAC GAACGTTGCG 1380 1381 CTGGTGGCCT CCCTCCTGCG CTTGGAGAAC AATCACTGCC ACATTGAGGA GAGTGAACTC 1440 1441 GTGCTGAAGA AGGCGCACAA ACACAGCGAG CTCATCATCC TCTACGAGAA GAAAGGGCTG 1500 1501 CACCATAAAG CCCTGCAGGT CTTGCTGGAT CAGTCGAAGA AGGCGAACTC TCCACTGAAA 1560 1561 GGACACGAGA GGACTGTGCA GTATTTAAAA TTCGCAGGGA AGGAGAATTT AAAGATCATT 1620 1621 TTTGAGTTTG CGCCCTGGGT CTTAAAAGCT TGCCCTGAAG ATGGATTAAA GATATTTACG 1680 1681 GAAGATCTGC CAGAGGTGGA GTCCCTCCCA CGAGACCAAG TCCTAGGGTT CCTCACAGAC 1740 1741 GACTTCAAGG ACCTCGTCAT TCCTTACTTG GAAGAACACA TTATTCTGTT TTATGAGGAG 1800 1801 ACAGATTCGG AGTTCCACAA CTGCCTTATC CAGCAGTATT TGGAGAAGGT ACAAGTACTG 1860 1861 ATGCAGGAAT ATCTCAACTC TCTGCCAGAA GATGAGATTC CAGTCCCTGC AGGGAGGGAA 1920 1921 GAGGGGGAGC TGGGAGAGTA CAGAACCAAA CTCCTCAACA TCTTGGAAAT CTCCACGTAC 1980 1981 TACGAGCCTC ACGTACTCAT TAGTGACTTT CCATTTGATG GCCTGCGTGA GGAACGTGCC 2040 2041 CTGCTGCTGG GACGGATGGG GAAGCACGAA CAAGCCCTCT TCATCTACGT CCACGTACTG 2100 2101 AAGGATATTA AAATGGCTGA GGAGTATTGC CATAAACACT ATGACAGAAA TACAGACGGC 2160 2161 AGCAAAGATG TGTACCTCTC CCTGCTGCGG ATGTATCTGT CACCACCAGA TGTTCACCGT 2220 2221 CTGGGACCAA TCAAAATGGA GATGTCCGAG CCCCAAGCCA ATCTTCAAGC TGCGCTGCAG 2280 2281 GTGTTGGAAC TGCATCATAG TAAGCTGGAT ACAACCAAGG CCATCAACCT GCTTCCTGCC 2340 2341 AACACTCAAA TCCGAGAGAT CCGTGTCTTT CTGGAGAACG TTCTGGAAGA AAATGCCAAA 2400 2401 AAGAAGCGCT TCAGTCAAGT TCTGAAGAGC TTGCTTCATG CAGAGTTTCT AAGGGCTCAA 2460 2461 GAGCAGAGGA TTTTCCATCA GCAGGTCAAG TGTATCATAA CGGAGGAGAA AGTGTGTCGT 2520 2521 GTTTGTAAGA AAAAAATTGG CAACAGTGCG TTCGCCCGAT ATCCCAGTGG CATCGTCGTC 2580 2581 CACTATTTTT GCTGCAAAGA CCGTAGCGTG TGCCCAGCCG AGACGTGA 2628 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Hos-a876 | Homo sapiens | 0.0 | 1449 | undefined |
| LLPS-Mum-a862 | Mus musculus | 0.0 | 1439 | undefined |