LLPS-Lac-2826
R3HDM1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Gene Name: | R3HDM1 |
| Ensembl Gene: | ENSLACG00000005334.1 |
| Ensembl Protein: | ENSLACP00000006008.1 |
| Organism: | Latimeria chalumnae |
| Taxa ID: | 7897 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| P-body, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSLACT00000006060.1 | ENSLACP00000006008.1 |
| Ensembl | ENSLACT00000006061.1 | ENSLACP00000006009.1 |
| UniProt | H3A8N7, H3A8N7_LATCH | |
| GeneBank | AFYH01169243, AFYH01169240, AFYH01169237, AFYH01169239, AFYH01169238, AFYH01169244, AFYH01169242, AFYH01169241, AFYH01169235, AFYH01169236 | |
| RefSeq | XM_006006186.2 | XP_006006248.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MRMSDTVIVK EETKTMKGSE AVVQESIPSE NLTKSESREL TEAEKEESHS DNKNESQQQI 60 61 QTLGQTGKRS KSNAKLKLVR SLAVCEESSP PPTVEIPQDN QDYRIQIQLT QSFEKEEKPI 120 121 KDETEKEKGT DKQEKSDKMP KKMLSRDSSQ EYTDSTGIDL HEFLVNILKN NPRERMMLLK 180 181 LEQEILDFIG NNEIQRKKFP PMTSYHRMLL HRVAAYFGLD HNVDQSGKSV IINKTTNTRI 240 241 PDQKFCEHIK DEKSEDFQKR YILKRDNSSI DKDDSQMRIR LKDDRRSKSI EEREEEYQRV 300 301 RDRIFAQDAS FSQDIYLTDK RIQEEETNST QQRRQIFRVN KDTSGRSANS RQSSTETELK 360 361 YSEPRPWSST DSDSSNRNLK PAMTKASSFS GISVLTRGDS SGSSKSTGRL SKTGQPFINP 420 421 DGSPVVYNPP ITQQSVRPPI TVPAQQPPPP PPQPVPQQPQ APNHILPQSI RPLQPPSQPV 480 481 QYSTVSYPPP LLPVSPTQQY TVQDNLGPQF SQMSLGRQPS AEAADPHTAM FQSSVVLQPP 540 541 QQPGYIMASP GQPVPTPSYS ASGPPVNHQV LQQQGYIHQP IQQMPACYCA PSQYPHSSQQ 600 601 YRPVTPVHYN TQQNQPLAQP PQQTGYQAMM SGQPQNYQGL VGVQQPQNQT LVGSQHNNMG 660 661 NQIQGMMVQY PSMPSYPVSM PQGSQGMPQQ TYQQPILISN QSNQGPIPTA GMPVYYSVIS 720 721 PGQQNNLSSS VSYLQPPGSE QFPRTSSPCN SQQLQGHQCA VYNYHSSQKP PSPTQLQQQP 780 781 PLPSSQPKHQ QGLPIVQSSL TSPPTSPNTS PIGLPIMQTV QAVAPPPGGG MVMMQLNLPN 840 841 NPQPRAHSPP HWKQNKYYSV DHQRGQKSTE LSNFDNATQN SPQLGSPATS PAQSPAPAQL 900 901 SNMKNIRPNL APLPIVPHFS RPFVPGQGDA RYPLLGQPLQ YNHPIHPPLL HGPHVVTSQQ 960 961 GPPGNRHGGR GKKPARKAAS TDLGAGEPVV GKVLEVTDLP EGISRTDAEK FFGELFKVGA 1020 1021 KIRWLQDPPP QHQQQHQHCG SGDSNANIEH SKPSSDLAST YTILAVFPTI MAAQNALRKQ 1080 1081 NNLMNKFRLR MSKKHYDFPV LERASSQ 1107 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAGGATGT CTGATACTGT TATTGTAAAA GAAGAAACCA AAACGATGAA AGGTTCAGAG 60 61 GCAGTAGTGC AAGAATCAAT ACCATCCGAA AACCTGACAA AATCAGAAAG CCGTGAGCTC 120 121 ACCGAGGCAG AAAAGGAAGA AAGTCACAGT GACAACAAAA ACGAATCGCA GCAGCAAATA 180 181 CAAACACTTG GACAGACAGG GAAAAGGTCA AAGTCTAATG CAAAGTTAAA GCTAGTTCGG 240 241 AGCCTCGCTG TATGTGAAGA GTCTTCTCCT CCCCCCACAG TTGAAATTCC TCAGGATAAC 300 301 CAGGATTATA GGATACAGAT CCAGTTAACA CAGTCATTTG AAAAAGAAGA AAAACCTATA 360 361 AAAGATGAAA CGGAAAAAGA AAAGGGAACA GACAAGCAAG AAAAATCAGA TAAGATGCCT 420 421 AAGAAGATGC TATCAAGAGA TTCTAGCCAA GAATATACAG ATTCCACTGG TATAGATCTA 480 481 CATGAATTTT TAGTAAATAT ATTAAAAAAT AATCCCAGGG AAAGAATGAT GCTGCTGAAG 540 541 TTGGAACAAG AAATTCTTGA CTTTATTGGT AATAATGAAA TTCAACGTAA AAAATTTCCT 600 601 CCTATGACAT CCTACCACAG AATGTTATTA CATAGAGTTG CTGCCTATTT TGGATTGGAT 660 661 CACAATGTTG ACCAAAGTGG GAAGTCGGTT ATAATTAATA AAACAACTAA TACAAGAATA 720 721 CCTGATCAAA AGTTTTGTGA GCACATAAAG GATGAGAAAA GTGAAGATTT TCAAAAACGG 780 781 TACATTCTTA AAAGAGACAA CTCTAGTATA GACAAAGATG ACAGCCAAAT GCGAATACGT 840 841 CTGAAAGATG ATAGAAGAAG CAAGTCTATA GAAGAGCGTG AGGAAGAGTA CCAGCGAGTT 900 901 AGAGACAGGA TATTTGCACA AGATGCTTCA TTTTCCCAGG ATATTTACCT TACAGATAAA 960 961 AGAATTCAAG AGGAGGAAAC AAACAGTACG CAGCAAAGAC GACAGATTTT TAGAGTAAAT 1020 1021 AAGGATACTT CAGGGAGATC TGCAAACAGC CGTCAGAGTA GCACTGAAAC CGAGCTGAAG 1080 1081 TATTCAGAAC CTCGTCCTTG GAGTAGCACT GACTCGGATA GCTCCAACCG TAACCTGAAA 1140 1141 CCAGCCATGA CTAAAGCCAG CAGCTTTAGT GGTATTTCGG TCCTGACTCG AGGAGATAGC 1200 1201 TCTGGTAGCA GCAAAAGCAC AGGCAGGCTC TCAAAGACAG GTCAGCCATT TATAAATCCA 1260 1261 GATGGAAGTC CCGTTGTGTA TAATCCCCCT ATTACTCAGC AATCTGTAAG ACCCCCTATC 1320 1321 ACTGTACCTG CCCAGCAACC ACCACCACCT CCCCCTCAGC CTGTCCCTCA GCAGCCTCAA 1380 1381 GCACCCAATC ACATTCTTCC ACAGTCAATC CGGCCTCTGC AGCCTCCTTC GCAGCCTGTC 1440 1441 CAATACTCTA CGGTCTCTTA TCCACCTCCG CTCCTGCCAG TCTCACCTAC CCAGCAATAT 1500 1501 ACTGTGCAAG ACAACCTTGG GCCCCAGTTC AGCCAGATGA GCCTCGGGCG CCAGCCTTCA 1560 1561 GCTGAAGCTG CTGATCCTCA CACTGCCATG TTCCAGTCAT CAGTAGTTCT TCAGCCCCCT 1620 1621 CAGCAGCCTG GCTATATCAT GGCGTCACCA GGGCAACCAG TTCCTACTCC CAGCTATTCT 1680 1681 GCTTCTGGTC CTCCTGTCAA TCACCAAGTG CTTCAGCAAC AAGGATATAT CCATCAGCCT 1740 1741 ATTCAACAAA TGCCAGCGTG TTATTGTGCT CCAAGCCAGT ATCCCCACTC CAGCCAACAA 1800 1801 TATCGGCCAG TCACACCTGT CCATTATAAT ACACAACAAA ACCAGCCACT TGCACAGCCT 1860 1861 CCCCAACAGA CAGGTTATCA GGCGATGATG TCTGGTCAGC CACAGAACTA TCAAGGTTTG 1920 1921 GTAGGAGTTC AACAACCTCA AAATCAGACC TTAGTAGGTA GCCAACATAA CAACATGGGG 1980 1981 AATCAGATAC AAGGCATGAT GGTGCAGTAT CCTTCAATGC CATCCTATCC GGTTTCAATG 2040 2041 CCTCAAGGAT CCCAAGGAAT GCCCCAACAA ACATATCAAC AACCAATATT AATATCAAAC 2100 2101 CAGTCCAATC AAGGGCCCAT CCCCACAGCT GGAATGCCCG TCTATTACAG TGTTATTTCA 2160 2161 CCTGGACAGC AAAATAATTT GAGCTCTTCA GTAAGTTATC TGCAACCTCC AGGATCAGAG 2220 2221 CAGTTCCCTC GAACATCCTC TCCATGTAAC TCACAGCAGC TCCAAGGGCA TCAGTGTGCA 2280 2281 GTTTATAACT ACCATTCGAG TCAGAAGCCA CCATCTCCTA CCCAACTGCA ACAGCAGCCG 2340 2341 CCGCTCCCTT CATCACAGCC CAAGCATCAG CAGGGCCTTC CCATTGTGCA GTCCAGCTTA 2400 2401 ACGTCTCCAC CCACATCACC CAACACTTCA CCTATTGGCC TCCCCATCAT GCAGACAGTA 2460 2461 CAAGCTGTAG CACCACCACC AGGTGGAGGG ATGGTTATGA TGCAACTGAA TCTACCTAAT 2520 2521 AATCCTCAAC CTCGAGCCCA TTCTCCACCT CATTGGAAAC AGAACAAATA TTACAGTGTG 2580 2581 GACCACCAGA GAGGGCAGAA ATCCACCGAA CTTAGTAATT TTGATAATGC CACACAGAAC 2640 2641 AGTCCTCAAC TAGGTAGCCC TGCAACGTCC CCAGCTCAGT CTCCAGCACC AGCACAGCTA 2700 2701 TCAAACATGA AGAACATCCG TCCTAACCTG GCACCACTTC CAATTGTGCC CCACTTTTCT 2760 2761 AGACCTTTTG TCCCTGGGCA AGGTGATGCT CGCTACCCAT TACTTGGCCA ACCGTTACAG 2820 2821 TATAACCATC CAATCCACCC ACCTTTACTC CATGGACCAC ATGTAGTCAC CAGCCAGCAG 2880 2881 GGTCCTCCTG GAAATCGGCA TGGAGGTAGA GGGAAAAAGC CAGCCAGGAA GGCAGCTTCC 2940 2941 ACCGATCTTG GCGCTGGGGA GCCAGTAGTT GGAAAAGTTC TGGAAGTTAC TGATCTGCCA 3000 3001 GAGGGAATAA GCCGCACAGA TGCTGAAAAG TTTTTTGGGG AACTATTTAA AGTGGGTGCT 3060 3061 AAGATTCGGT GGCTTCAGGA CCCTCCACCT CAGCATCAAC AGCAGCATCA ACACTGTGGT 3120 3121 AGTGGAGACA GCAATGCAAA TATTGAACAC TCCAAACCTT CCAGTGACTT GGCCTCCACC 3180 3181 TATACAATCT TAGCTGTGTT CCCTACAATA ATGGCTGCTC AAAATGCATT GAGGAAACAA 3240 3241 AATAATTTAA TGAACAAGTT TAGACTGAGA ATGAGCAAGA AGCACTATGA CTTTCCTGTT 3300 3301 CTGGAAAGGG CTAGTTCTCA GTAA 3324 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Cas-3314 | Carlito syrichta | 85.56 | 2e-85 | 288 |
| LLPS-Anc-1862 | Anolis carolinensis | 79.7 | 0.0 | 569 |
| LLPS-Pes-3437 | Pelodiscus sinensis | 79.19 | 1e-175 | 552 |
| LLPS-Sus-1880 | Sus scrofa | 78.68 | 1e-169 | 537 |
| LLPS-Dar-3238 | Danio rerio | 78.46 | 2e-20 | 102 |
| LLPS-Anp-1098 | Anas platyrhynchos | 78.17 | 0.0 | 574 |
| LLPS-Sah-3099 | Sarcophilus harrisii | 78.17 | 4e-172 | 543 |
| LLPS-Aim-4188 | Ailuropoda melanoleuca | 77.66 | 1e-170 | 539 |
| LLPS-Caf-4409 | Canis familiaris | 77.41 | 5e-170 | 537 |
| LLPS-Eqc-1063 | Equus caballus | 77.41 | 2e-169 | 537 |
| LLPS-Ict-3134 | Ictidomys tridecemlineatus | 77.41 | 3e-168 | 533 |
| LLPS-Meg-0263 | Meleagris gallopavo | 77.41 | 4e-180 | 563 |
| LLPS-Fec-1475 | Felis catus | 77.41 | 1e-169 | 537 |
| LLPS-Mup-1291 | Mustela putorius furo | 77.41 | 6e-170 | 537 |
| LLPS-Mea-1149 | Mesocricetus auratus | 77.41 | 5e-169 | 536 |
| LLPS-Ora-1851 | Ornithorhynchus anatinus | 77.41 | 4e-167 | 530 |
| LLPS-Ran-2527 | Rattus norvegicus | 77.16 | 9e-168 | 532 |
| LLPS-Myl-0671 | Myotis lucifugus | 77.16 | 2e-169 | 536 |
| LLPS-Mum-3696 | Mus musculus | 77.16 | 2e-167 | 531 |
| LLPS-Nol-2236 | Nomascus leucogenys | 76.9 | 6e-162 | 516 |
| LLPS-Bot-0598 | Bos taurus | 76.9 | 4e-170 | 538 |
| LLPS-Ova-0766 | Ovis aries | 76.9 | 2e-170 | 538 |
| LLPS-Leo-3728 | Lepisosteus oculatus | 76.71 | 5e-159 | 509 |
| LLPS-Mam-0010 | Macaca mulatta | 76.65 | 3e-161 | 514 |
| LLPS-Tag-3163 | Taeniopygia guttata | 76.65 | 8e-177 | 554 |
| LLPS-Hos-0177 | Homo sapiens | 76.65 | 2e-161 | 514 |
| LLPS-Loa-4507 | Loxodonta africana | 76.65 | 2e-167 | 531 |
| LLPS-Otg-0322 | Otolemur garnettii | 76.65 | 7e-167 | 529 |
| LLPS-Fia-0667 | Ficedula albicollis | 76.65 | 1e-175 | 554 |
| LLPS-Paa-2017 | Papio anubis | 76.65 | 4e-161 | 514 |
| LLPS-Maf-2735 | Macaca fascicularis | 76.65 | 3e-161 | 514 |
| LLPS-Aon-3495 | Aotus nancymaae | 76.65 | 2e-168 | 533 |
| LLPS-Orc-2193 | Oryctolagus cuniculus | 76.4 | 2e-169 | 533 |
| LLPS-Chs-0047 | Chlorocebus sabaeus | 76.4 | 1e-160 | 513 |
| LLPS-Caj-0621 | Callithrix jacchus | 76.4 | 5e-168 | 532 |
| LLPS-Cea-4561 | Cercocebus atys | 76.14 | 3e-159 | 511 |
| LLPS-Fud-4307 | Fukomys damarensis | 75.89 | 1e-168 | 535 |
| LLPS-Pat-1298 | Pan troglodytes | 74.62 | 3e-160 | 511 |
| LLPS-Pap-1187 | Pan paniscus | 74.62 | 3e-160 | 511 |
| LLPS-Man-3544 | Macaca nemestrina | 74.62 | 3e-160 | 511 |
| LLPS-Mal-2601 | Mandrillus leucophaeus | 74.62 | 4e-160 | 511 |
| LLPS-Gog-2136 | Gorilla gorilla | 74.43 | 2e-158 | 507 |
| LLPS-Poa-3157 | Pongo abelii | 74.18 | 1e-157 | 504 |
| LLPS-Cap-2466 | Cavia porcellus | 73.86 | 8e-161 | 514 |
| LLPS-Rhb-3008 | Rhinopithecus bieti | 72.59 | 2e-151 | 488 |
| LLPS-Asm-2287 | Astyanax mexicanus | 71.86 | 1e-154 | 497 |
| LLPS-Scf-1672 | Scleropages formosus | 71.28 | 2e-152 | 491 |
| LLPS-Icp-2226 | Ictalurus punctatus | 69.52 | 3e-104 | 358 |
| LLPS-Urm-1043 | Ursus maritimus | 69.04 | 7e-147 | 474 |
| LLPS-Xet-3774 | Xenopus tropicalis | 68.02 | 3e-142 | 460 |
| LLPS-Tar-2260 | Takifugu rubripes | 67.36 | 4e-94 | 329 |
| LLPS-Scm-2287 | Scophthalmus maximus | 65.66 | 2e-105 | 362 |
| LLPS-Orn-3795 | Oreochromis niloticus | 65.4 | 1e-104 | 360 |
| LLPS-Mod-1488 | Monodelphis domestica | 63.47 | 1e-102 | 333 |
| LLPS-Cii-1731 | Ciona intestinalis | 57.89 | 3e-35 | 139 |
| LLPS-Gaga-2885 | Gallus gallus | 57.22 | 1e-105 | 365 |
| LLPS-Drm-1915 | Drosophila melanogaster | 42.31 | 3e-25 | 118 |
| LLPS-Coc-1337 | Corchorus capsularis | 41.77 | 2e-06 | 55.5 |
| LLPS-Arl-1432 | Arabidopsis lyrata | 39.53 | 3e-07 | 58.2 |
| LLPS-Orb-1226 | Oryza barthii | 39.08 | 6e-07 | 57.0 |
| LLPS-Orni-1749 | Oryza nivara | 39.08 | 6e-07 | 57.0 |
| LLPS-Php-2366 | Physcomitrella patens | 37.78 | 5e-08 | 60.8 |
| LLPS-Dos-1594 | Dothistroma septosporum | 37.5 | 6e-10 | 67.8 |
| LLPS-Tum-1589 | Tuber melanosporum | 36.9 | 3e-11 | 72.0 |
| LLPS-Thc-0225 | Theobroma cacao | 36.17 | 3e-06 | 55.5 |
| LLPS-Cogr-1134 | Colletotrichum graminicola | 36.11 | 3e-08 | 62.4 |
| LLPS-Cog-1311 | Colletotrichum gloeosporioides | 36.11 | 4e-08 | 62.0 |
| LLPS-Sot-1987 | Solanum tuberosum | 35.87 | 1e-06 | 56.6 |
| LLPS-Sol-2339 | Solanum lycopersicum | 35.87 | 2e-06 | 56.2 |
| LLPS-Trv-0240 | Trichoderma virens | 35.71 | 7e-08 | 61.2 |
| LLPS-Pot-0727 | Populus trichocarpa | 35.4 | 6e-08 | 60.8 |
| LLPS-Met-0419 | Medicago truncatula | 35.23 | 1e-06 | 56.2 |
| LLPS-Kop-0816 | Komagataella pastoris | 34.62 | 3e-11 | 70.1 |
| LLPS-Gas-0759 | Galdieria sulphuraria | 34.07 | 9e-09 | 63.2 |
| LLPS-Mae-2694 | Manihot esculenta | 33.33 | 3e-07 | 58.2 |
| LLPS-Nia-2079 | Nicotiana attenuata | 33.33 | 7e-07 | 57.4 |
| LLPS-Prp-2035 | Prunus persica | 33.05 | 5e-08 | 60.8 |
| LLPS-Nec-0942 | Neurospora crassa | 32.5 | 1e-07 | 60.1 |
| LLPS-Pyt-0938 | Pyrenophora teres | 32.43 | 2e-09 | 66.2 |
| LLPS-Lem-1230 | Leptosphaeria maculans | 31.82 | 1e-09 | 67.0 |
| LLPS-Gor-1563 | Gossypium raimondii | 31.45 | 1e-06 | 56.2 |
| LLPS-Ved-0649 | Verticillium dahliae | 30.84 | 1e-07 | 60.5 |
| LLPS-Coo-1554 | Colletotrichum orbiculare | 30.53 | 6e-09 | 64.7 |