LLPS-Lac-2755
SRFBP1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Serum response factor binding protein 1 |
| Gene Name: | SRFBP1 |
| Ensembl Gene: | ENSLACG00000004456.1 |
| Ensembl Protein: | ENSLACP00000005014.1 |
| Organism: | Latimeria chalumnae |
| Taxa ID: | 7897 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSLACT00000005058.1 | ENSLACP00000005014.1 |
| UniProt | H3A5U3, H3A5U3_LATCH | |
| GeneBank | AFYH01179897, AFYH01179895, AFYH01179896, AFYH01179898, AFYH01179899 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 PNSTSAERAI ARVVSHPLIS KKIADIKASI KAFKEARQKP SAGQKPQESK LGESATLEPS 60 61 QLAHDEFGAD EENTEQPTAG TLPGSRNKKE KVKHDASLNS STTVNSWREP AQKSVVKEEL 120 121 SARGGSLECV AERESRIQDD VQLKTVQFGK QHEKSQEKAT SENDSSGTEE SGDEEKEYFD 180 181 DSTEERFYNQ SSGTENSGDD DDDFFIGKVR RTKKKRMESD SASHEEKQDS IQSSIVNVPK 240 241 GAEGETRADT ECSKQNLKQM KLKSMFCGSL SGSKVQKKKD KKGKPQLKGK QFPSLMMSIL 300 301 LQNFFFQKFK KKRKRTQKRS QQPIHPSWEA SRKLKEQQSQ ITAFQGKKIR FDD 353 |
| Nucleotide CDS Sequence (FASTA) |
1 CCAAATAGCA CTTCAGCTGA ACGCGCTATT GCAAGAGTGG TATCACACCC TTTGATAAGC 60 61 AAAAAAATTG CAGACATCAA AGCTTCTATA AAAGCATTTA AGGAAGCCAG GCAGAAACCC 120 121 TCAGCTGGTC AAAAGCCTCA AGAGTCTAAA CTGGGAGAAT CAGCAACCTT GGAGCCCTCC 180 181 CAGTTAGCCC ATGATGAGTT CGGTGCTGAT GAAGAGAATA CTGAACAGCC CACAGCTGGA 240 241 ACACTGCCTG GAAGCCGTAA CAAAAAGGAA AAAGTAAAAC ATGATGCTTC ACTGAACAGC 300 301 AGCACAACAG TAAATAGCTG GAGGGAACCT GCACAAAAAT CTGTTGTCAA GGAAGAGCTA 360 361 AGTGCTCGAG GTGGCTCATT AGAGTGTGTT GCTGAAAGAG AGTCCAGGAT TCAGGATGAC 420 421 GTACAACTGA AGACAGTTCA GTTTGGAAAA CAACATGAAA AATCCCAGGA AAAGGCAACA 480 481 TCAGAAAATG ATTCCAGTGG TACAGAGGAG TCTGGTGATG AAGAGAAGGA GTACTTTGAT 540 541 GATAGTACAG AAGAAAGGTT TTACAACCAG TCCTCTGGCA CTGAAAACAG CGGTGATGAC 600 601 GACGATGACT TTTTCATTGG TAAAGTAAGG AGAACAAAGA AAAAGCGGAT GGAAAGTGAC 660 661 TCTGCCTCAC ATGAGGAAAA GCAGGACAGT ATCCAAAGTA GTATAGTAAA TGTTCCAAAA 720 721 GGAGCAGAGG GGGAGACCAG AGCTGATACA GAGTGCAGCA AACAAAACTT AAAGCAGATG 780 781 AAGTTAAAAT CCATGTTTTG TGGTTCTCTG TCTGGGTCAA AAGTACAGAA GAAAAAAGAC 840 841 AAGAAAGGGA AACCACAATT AAAGGGCAAA CAGTTCCCAT CTCTAATGAT GTCCATCCTA 900 901 TTGCAAAATT TTTTTTTCCA GAAATTCAAA AAGAAAAGAA AAAGAACTCA GAAAAGGTCA 960 961 CAGCAGCCTA TTCATCCTTC CTGGGAAGCG AGCAGAAAAC TGAAGGAGCA ACAGTCCCAA 1020 1021 ATCACAGCAT TTCAGGGAAA AAAGATCAGA TTTGATGATT GA 1062 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Dar-1996 | Danio rerio | 90.0 | 1e-09 | 63.9 |
| LLPS-Asm-0253 | Astyanax mexicanus | 89.29 | 8e-08 | 58.2 |
| LLPS-Icp-0690 | Ictalurus punctatus | 85.71 | 2e-07 | 57.4 |
| LLPS-Tar-1351 | Takifugu rubripes | 80.0 | 2e-07 | 57.0 |
| LLPS-Orl-1698 | Oryzias latipes | 80.0 | 8e-08 | 58.2 |
| LLPS-Scm-1003 | Scophthalmus maximus | 80.0 | 1e-07 | 57.8 |
| LLPS-Xim-2106 | Xiphophorus maculatus | 78.57 | 3e-06 | 53.1 |
| LLPS-Scf-1175 | Scleropages formosus | 76.67 | 1e-07 | 57.0 |
| LLPS-Rhb-1192 | Rhinopithecus bieti | 47.19 | 4e-25 | 108 |
| LLPS-Otg-2865 | Otolemur garnettii | 46.63 | 1e-20 | 96.3 |
| LLPS-Ran-2378 | Rattus norvegicus | 46.07 | 3e-26 | 112 |
| LLPS-Leo-0181 | Lepisosteus oculatus | 44.26 | 3e-27 | 115 |
| LLPS-Gaga-0334 | Gallus gallus | 44.09 | 1e-21 | 99.0 |
| LLPS-Orc-2271 | Oryctolagus cuniculus | 43.89 | 1e-20 | 96.3 |
| LLPS-Mum-1694 | Mus musculus | 43.58 | 2e-22 | 101 |
| LLPS-Xet-3390 | Xenopus tropicalis | 43.58 | 1e-24 | 107 |
| LLPS-Fec-2951 | Felis catus | 43.01 | 6e-22 | 99.8 |
| LLPS-Ora-2297 | Ornithorhynchus anatinus | 42.46 | 5e-23 | 102 |
| LLPS-Mea-1181 | Mesocricetus auratus | 42.31 | 4e-23 | 103 |
| LLPS-Orn-3826 | Oreochromis niloticus | 41.44 | 1e-15 | 81.6 |
| LLPS-Paa-1139 | Papio anubis | 39.67 | 1e-30 | 125 |
| LLPS-Hos-2369 | Homo sapiens | 39.67 | 1e-29 | 122 |
| LLPS-Nol-0409 | Nomascus leucogenys | 39.39 | 4e-29 | 120 |
| LLPS-Chs-2906 | Chlorocebus sabaeus | 39.23 | 1e-25 | 110 |
| LLPS-Gaa-0585 | Gasterosteus aculeatus | 39.2 | 2e-17 | 87.4 |
| LLPS-Gog-0321 | Gorilla gorilla | 38.95 | 7e-30 | 123 |
| LLPS-Caj-0895 | Callithrix jacchus | 38.87 | 5e-33 | 132 |
| LLPS-Pap-2624 | Pan paniscus | 38.78 | 7e-30 | 122 |
| LLPS-Aon-1722 | Aotus nancymaae | 38.75 | 1e-30 | 125 |
| LLPS-Tag-2757 | Taeniopygia guttata | 38.67 | 1e-14 | 76.3 |
| LLPS-Cea-0081 | Cercocebus atys | 38.57 | 5e-30 | 123 |
| LLPS-Man-4107 | Macaca nemestrina | 38.57 | 4e-30 | 124 |
| LLPS-Maf-1238 | Macaca fascicularis | 38.29 | 1e-29 | 122 |
| LLPS-Mam-2704 | Macaca mulatta | 38.29 | 3e-29 | 121 |
| LLPS-Cas-1017 | Carlito syrichta | 37.92 | 6e-26 | 111 |
| LLPS-Pat-2981 | Pan troglodytes | 37.47 | 3e-29 | 121 |
| LLPS-Poa-2897 | Pongo abelii | 37.43 | 5e-28 | 117 |
| LLPS-Sus-0673 | Sus scrofa | 36.97 | 2e-26 | 113 |
| LLPS-Ova-4043 | Ovis aries | 36.94 | 9e-15 | 78.6 |
| LLPS-Ten-1767 | Tetraodon nigroviridis | 36.93 | 2e-08 | 60.1 |
| LLPS-Myl-3776 | Myotis lucifugus | 36.74 | 9e-26 | 110 |
| LLPS-Pes-0338 | Pelodiscus sinensis | 36.46 | 2e-28 | 118 |
| LLPS-Mup-2876 | Mustela putorius furo | 36.31 | 3e-26 | 112 |
| LLPS-Mal-2431 | Mandrillus leucophaeus | 36.3 | 3e-16 | 82.8 |
| LLPS-Caf-1305 | Canis familiaris | 36.11 | 2e-25 | 110 |
| LLPS-Bot-2254 | Bos taurus | 36.03 | 3e-22 | 100 |
| LLPS-Ict-0938 | Ictidomys tridecemlineatus | 35.85 | 8e-26 | 110 |
| LLPS-Fud-2122 | Fukomys damarensis | 35.75 | 5e-25 | 108 |
| LLPS-Cap-4157 | Cavia porcellus | 35.67 | 4e-28 | 117 |
| LLPS-Eqc-2181 | Equus caballus | 35.33 | 6e-24 | 105 |
| LLPS-Aim-1847 | Ailuropoda melanoleuca | 35.19 | 8e-24 | 105 |
| LLPS-Mod-3879 | Monodelphis domestica | 35.15 | 8e-22 | 99.4 |
| LLPS-Loa-0743 | Loxodonta africana | 35.07 | 3e-21 | 97.8 |
| LLPS-Urm-1194 | Ursus maritimus | 34.6 | 6e-25 | 108 |
| LLPS-Pof-1985 | Poecilia formosa | 34.52 | 1e-17 | 87.4 |
| LLPS-Anp-1521 | Anas platyrhynchos | 34.5 | 8e-20 | 92.4 |
| LLPS-Anc-3474 | Anolis carolinensis | 34.12 | 9e-24 | 105 |
| LLPS-Sah-0524 | Sarcophilus harrisii | 33.6 | 6e-22 | 99.8 |
| LLPS-Meg-0179 | Meleagris gallopavo | 32.09 | 9e-12 | 69.3 |
| LLPS-Fia-2182 | Ficedula albicollis | 31.88 | 6e-18 | 88.2 |