LLPS-Ict-a588
RTN1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Reticulon |
| Gene Name: | RTN1 |
| Ensembl Gene: | ENSSTOG00000023340.2 |
| Ensembl Protein: | ENSSTOP00000014878.2 |
| Organism: | Ictidomys tridecemlineatus |
| Taxa ID: | 43179 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Postsynaptic density | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSSTOT00000023718.2 | ENSSTOP00000014878.2 |
| Ensembl | ENSSTOT00000042106.1 | ENSSTOP00000032616.1 |
| UniProt | I3MRY3, I3MRY3_ICTTR | |
| GeneBank | AGTP01026771, AGTP01026769, AGTP01026770, AGTP01026773, AGTP01026766, AGTP01026772, AGTP01026767, AGTP01026768 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAAPPDPQDE LLPLASPGSQ WFGDRGEGEN ETVTPKGARP APQTEEPGRG LGSGTEGAAP 60 61 RELGSGPARP PPVAMETAST GMAAVSSALD WSSTTRQDGE GACYTSLISD ISYAPQEDST 120 121 YFTGILQKEN GHISTSENPE ELGTPGASLP DVPGMESRGL FSSDSGIEMT PAESTEVNKI 180 181 LVDPLDQMKA EAYKYMDITR PEEGKGQEQH LPELEEKDLD FKNKDTEIST KPEGVRGPDK 240 241 AAPVEGKVIK DHLFEESTFA PYIDDLSEGQ HSAPLITAPV KITLTEIETP FAAVTQENSP 300 301 EKQDICLKPS PDTVPTVTVS EPEDDSPGSV TPPSSGTEPS AAESQGKCSI SEDELITAIK 360 361 EAKGLSYETT ESPRPVGQVA DRPEAKARSG LPTIPSPLDH EASSAESGDS EIELVSEDPM 420 421 ASEDALPSGY VTFGPVGGPP PSPASPSIQY SILREEREAE LDSELIIESC DASSASEESP 480 481 KREQDSPPMK PSALDAIREE TGARAEERAP SRRGLVEQGP FTYPSAVPQP GPELPSGDRA 540 541 PAPEGSPSQR KPGEEAMMSN QCPSATEGPG PRGPGTMPPL PFLNKQKAID LLYWRDIKQT 600 601 GIVFGSFLLL LFSLTQFSVV SVVAYLALAA LSATISFRIY KSVLQAVQKT DEGHPFKAYL 660 661 ELEITLSQEQ IQKYTDCLQL YVNSTLKELR RLFLVQDLVD SLKFAVLMWL LTYVGALFNG 720 721 LTLLLMAVVS MFTLPVVYVK HQAQVDQYLG LVRTHINAVV AKIQAKIPGA KRHAE 775 |
| Nucleotide CDS Sequence (FASTA) |
1 ACAGGCATGG CTGCTGTCTC CAGTGCCCTG GATTGGTCCT CAACAACACG GCAAGATGGG 60 61 GAAGGAGCAT GTTACACGTC TCTGATTTCT GACATCTCTT ACGCACCCCA GGAGGATTCT 120 121 ACATATTTCA CTGGAATTCT CCAGAAGGAA AATGGCCACA TCTCCACTTC AGAGAACCCT 180 181 GAGGAGTTGG GGACTCCTGG CGCCTCCTTA CCAGATGTGC CTGGGATGGA GTCTCGTGGC 240 241 TTATTCAGTT CAGATTCTGG AATAGAAATG ACGCCTGCAG AGTCCACTGA AGTGAACAAG 300 301 ATCCTAGTTG ACCCCCTGGA CCAGATGAAA GCGGAAGCCT ATAAATACAT GGACATAACC 360 361 AGGCCAGAGG AGGGGAAAGG TCAGGAGCAG CATCTCCCCG AGTTAGAAGA AAAAGACTTG 420 421 GATTTTAAGA ACAAAGACAC TGAAATCTCA ACAAAACCAG AAGGGGTTCG TGGACCTGAC 480 481 AAAGCAGAGG GGCAGCACAG TGCTCCTTTG ATCACTGCCC CAGTCAAAAT CACGCTGACG 540 541 GAGATCGAAA CGCCTTTCGC AGCTGTTACT CAAGAGAACT CTCCCGAGAA GCAAGATATC 600 601 TGTCTGAAGC CAAGTCCTGA CACAGTCCCC ACGGTCACTG TCTCAGAGCC TGAAGATGAC 660 661 AGCCCAGGAT CTGTCACTCC TCCATCTTCT GGAACAGTCT GTGGGATGAC AGAACCATCT 720 721 GCTGCGGAGT CCCAGGGAAA ATGCAGCATC TCGGAGGATG AGCTGATTAC TGCCATTAAA 780 781 GAAGCAAAAG GGTTGTCCTA TGAAACCACC GAGAGTCCAC GGCCGGTTGG CCAGGTGGCC 840 841 GACAGACCCG AGGCCAAGGC CAGGTCCGGG TTGCCAACCA TCCCCAGTCC CCTGGACCAT 900 901 GAGGCTAGCA GTGCAGAATC CGGGGACTCG GAAATTGAGC TGGTGTCTGA GGATCCGATG 960 961 GCTTCTGAGG ATGCGCTGCC CTCGGGCTAC GTGACCTTCG GCCCTGTGGG TGGCCCGCCG 1020 1021 CCTTCACCTG CCTCCCCATC CATCCAGTAT AGCATCCTGA GAGAGGAGCG AGAGGCCGAG 1080 1081 CTGGACAGCG AGCTCATCAT CGAGTCCTGT GACGCCTCCT CGGCCTCGGA GGAGAGCCCT 1140 1141 AAACGGGAGC AGGACTCGCC CCCGATGAAG CCCAGCGCCC TGGACGCCAT CAGGGAGGAG 1200 1201 ACTGGCGCCC GGGCGGAGGA GCGCGCGCCC AGCAGGCGGG GCCTGGTGGA GCAGGGCCCC 1260 1261 TTCACGTACC CCTCGGCTGT CCCCCAGCCC GGCCCTGAGC TGCCCTCTGG AGACCGAGCC 1320 1321 CCAGCCCCCG AGGGGTCCCC ATCACAGCGA AAACCTGGGG AAGAAGCAAT GATGTCCAAC 1380 1381 CAATGTCCGT CGGCCACAGA GGGCCCTGGA CCGCGAGGCC CTGGCACCAT GCCCCCTTTG 1440 1441 CCGTTTCTCA ATAAGCAGAA AGCTATCGAC CTGCTGTACT GGCGGGACAT CAAGCAGACT 1500 1501 GGTATCGTGT TTGGGAGCTT CCTGCTGCTG CTCTTCTCCC TGACTCAGTT CAGCGTGGTG 1560 1561 AGCGTCGTGG CCTACCTGGC CTTGGCTGCT CTCTCAGCCA CCATCAGTTT CCGCATCTAC 1620 1621 AAGTCTGTCT TACAAGCTGT GCAGAAAACC GACGAGGGCC ACCCTTTCAA GGCCTACCTG 1680 1681 GAACTTGAGA TCACCCTGTC CCAGGAACAG ATTCAGAAGT ACACGGACTG CCTGCAGCTC 1740 1741 TACGTGAACA GCACACTGAA AGAGCTCCGG AGGCTCTTCC TGGTCCAGGA CCTGGTGGAT 1800 1801 TCCTTAAAAT TTGCTGTCCT GATGTGGCTC CTGACTTACG TTGGCGCCCT CTTCAATGGC 1860 1861 CTGACCCTGC TGCTCATGGC TGTGGTTTCA ATGTTTACTC TACCTGTAGT GTATGTCAAA 1920 1921 CACCAGGCAC AGGTTGACCA ATATCTTGGA CTTGTGAGGA CTCACATAAA TGCTGTCGTG 1980 1981 GCAAAGATTC AAGCTAAAAT CCCCGGCGCC AAAAGACATG CTGAGTAG 2028 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Hos-a605 | Homo sapiens | 0.0 | 1244 | undefined |
| LLPS-Mum-a600 | Mus musculus | 0.0 | 1185 | undefined |