LLPS-Ict-0736
GATA1
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Uncharacterized protein |
Gene Name: | GATA1 |
Ensembl Gene: | ENSSTOG00000026993.2 |
Ensembl Protein: | ENSSTOP00000021600.1 |
Organism: | Ictidomys tridecemlineatus |
Taxa ID: | 43179 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Chromatin, Paraspeckle | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSSTOT00000025676.2 | ENSSTOP00000021600.1 |
UniProt | I3NB53, I3NB53_ICTTR | |
GeneBank | AGTP01099233, AGTP01099234 | |
RefSeq | XM_005338655.1 | XP_005338712.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MEYPGLGALG TSEPMPQFVD PALVPSTPES GVFFPSGPEG LDAAASSTGP STATAAATTL 60 61 AYYRDTEAYR HSPVFQVYPL LNCVEGIPGA SPYAGWAYGK PGLYPTSTVC PSREDSPPQA 120 121 PEDPDGKSNT SFLETLKTER LSPDLLTLGP ALPSSIPVSS SAYGGPDFSG PFFSPTGSPL 180 181 SSAAYSSPKL RGSLPLPPCE ARECVNCGAT ATPLWRRDRT GHYLCNACGL YHKMNGQNRP 240 241 LIRPKKRLIV SKRAGTQCTN CQTTTTTLWR RNASGDPVCN ACGLYYKLHQ VNRPLTMRKD 300 301 GIQTRNRKAS GKGKKKRGSS LGGAGAAEGP AGGFMVVAGS SGSGNCGDVA SGLTLGPPGT 360 361 AHLYQGLGPV VLSGPVSHLM PFPGPLLGSP TGSFPTGPMP PTTSTTVVAP LSS 413 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGAATACC CTGGCCTGGG GGCCCTGGGG ACCTCAGAAC CCATGCCTCA GTTTGTGGAT 60 61 CCTGCCTTAG TGCCCTCTAC ACCAGAGTCA GGGGTCTTCT TCCCCTCTGG GCCTGAGGGC 120 121 TTGGATGCAG CAGCTTCCTC CACTGGCCCA AGCACAGCCA CTGCTGCAGC TACTACACTG 180 181 GCCTACTACA GGGACACTGA GGCCTACAGA CACTCCCCAG TCTTTCAGGT GTACCCACTG 240 241 CTCAACTGCG TGGAAGGGAT CCCAGGGGCT TCACCCTATG CTGGCTGGGC CTATGGCAAG 300 301 CCAGGGCTCT ACCCTACCTC AACTGTGTGC CCCAGTCGTG AGGACTCCCC TCCTCAAGCA 360 361 CCGGAAGATC CAGATGGGAA GAGCAACACC AGCTTCCTGG AGACCTTGAA AACAGAGAGG 420 421 CTGAGTCCTG ACCTCTTGAC CCTGGGGCCT GCATTGCCTT CATCTATCCC TGTCTCCAGT 480 481 AGTGCTTATG GGGGTCCTGA CTTTTCTGGT CCCTTCTTTT CTCCCACTGG GAGCCCCCTC 540 541 AGTTCAGCAG CTTATTCTTC CCCCAAGCTT CGTGGAAGCC TTCCTCTACC TCCTTGTGAG 600 601 GCCAGAGAGT GTGTGAACTG TGGAGCAACA GCCACTCCAC TGTGGCGTAG GGACAGGACC 660 661 GGTCACTACC TTTGCAATGC TTGTGGCCTC TATCACAAGA TGAATGGGCA AAACAGGCCC 720 721 CTCATTCGGC CCAAGAAGCG CCTGATTGTC AGTAAACGGG CAGGTACTCA GTGCACCAAC 780 781 TGCCAGACAA CAACCACGAC ACTGTGGCGG AGAAATGCCA GTGGAGACCC TGTGTGCAAT 840 841 GCCTGTGGCC TTTACTACAA GCTACACCAG GTGAACCGAC CACTAACCAT GAGAAAGGAT 900 901 GGTATTCAGA CTCGGAACCG CAAGGCATCT GGAAAAGGGA AAAAGAAGCG GGGGTCAAGT 960 961 CTAGGAGGAG CAGGAGCAGC TGAAGGACCA GCTGGTGGCT TCATGGTGGT GGCTGGTAGC 1020 1021 AGTGGTAGTG GGAATTGTGG AGACGTAGCC TCAGGCTTGA CACTGGGTCC TCCAGGCACT 1080 1081 GCTCATCTCT ACCAAGGCTT GGGCCCCGTG GTACTGTCAG GGCCTGTTAG CCACCTCATG 1140 1141 CCTTTCCCTG GACCCCTGCT GGGCTCACCC ACAGGATCCT TCCCCACAGG CCCCATGCCT 1200 1201 CCCACCACCA GCACCACTGT GGTGGCTCCA CTCAGCTCTT GA 1242 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Gog-4188 | Gorilla gorilla | 93.7 | 0.0 | 614 |
LLPS-Paa-3492 | Papio anubis | 93.7 | 0.0 | 615 |
LLPS-Pat-1388 | Pan troglodytes | 93.7 | 0.0 | 614 |
LLPS-Pap-0596 | Pan paniscus | 93.7 | 0.0 | 614 |
LLPS-Cea-1140 | Cercocebus atys | 93.46 | 0.0 | 613 |
LLPS-Mal-1130 | Mandrillus leucophaeus | 93.46 | 0.0 | 613 |
LLPS-Rhb-3231 | Rhinopithecus bieti | 93.46 | 0.0 | 613 |
LLPS-Hos-1687 | Homo sapiens | 93.46 | 0.0 | 610 |
LLPS-Chs-0375 | Chlorocebus sabaeus | 93.0 | 0.0 | 609 |
LLPS-Fud-4383 | Fukomys damarensis | 92.98 | 0.0 | 581 |
LLPS-Maf-2274 | Macaca fascicularis | 92.98 | 0.0 | 612 |
LLPS-Man-2439 | Macaca nemestrina | 92.98 | 0.0 | 612 |
LLPS-Cas-2458 | Carlito syrichta | 92.98 | 0.0 | 613 |
LLPS-Mam-0257 | Macaca mulatta | 92.98 | 0.0 | 612 |
LLPS-Tut-1683 | Tursiops truncatus | 92.46 | 0.0 | 551 |
LLPS-Caj-2575 | Callithrix jacchus | 92.25 | 0.0 | 606 |
LLPS-Aon-2174 | Aotus nancymaae | 92.25 | 0.0 | 605 |
LLPS-Poa-3958 | Pongo abelii | 92.07 | 3e-167 | 478 |
LLPS-Eqc-4236 | Equus caballus | 92.01 | 0.0 | 600 |
LLPS-Fec-0533 | Felis catus | 91.99 | 0.0 | 599 |
LLPS-Caf-1410 | Canis familiaris | 91.99 | 0.0 | 599 |
LLPS-Mup-0587 | Mustela putorius furo | 91.21 | 0.0 | 593 |
LLPS-Aim-2439 | Ailuropoda melanoleuca | 91.04 | 0.0 | 604 |
LLPS-Nol-2927 | Nomascus leucogenys | 91.04 | 0.0 | 583 |
LLPS-Orc-3443 | Oryctolagus cuniculus | 90.89 | 0.0 | 598 |
LLPS-Otg-1588 | Otolemur garnettii | 90.8 | 0.0 | 581 |
LLPS-Ere-0914 | Erinaceus europaeus | 89.38 | 3e-167 | 480 |
LLPS-Loa-4421 | Loxodonta africana | 89.29 | 0.0 | 575 |
LLPS-Cap-1335 | Cavia porcellus | 89.05 | 0.0 | 577 |
LLPS-Sus-2321 | Sus scrofa | 88.89 | 0.0 | 590 |
LLPS-Dio-1938 | Dipodomys ordii | 88.62 | 0.0 | 587 |
LLPS-Bot-1061 | Bos taurus | 87.86 | 0.0 | 561 |
LLPS-Ova-0456 | Ovis aries | 86.05 | 0.0 | 538 |
LLPS-Ran-2795 | Rattus norvegicus | 85.71 | 0.0 | 568 |
LLPS-Mum-2630 | Mus musculus | 85.23 | 0.0 | 567 |
LLPS-Asm-3528 | Astyanax mexicanus | 85.19 | 1e-52 | 188 |
LLPS-Icp-3867 | Ictalurus punctatus | 84.26 | 3e-52 | 187 |
LLPS-Orl-2663 | Oryzias latipes | 84.26 | 8e-53 | 188 |
LLPS-Leo-1350 | Lepisosteus oculatus | 84.26 | 1e-52 | 188 |
LLPS-Xim-3227 | Xiphophorus maculatus | 84.26 | 1e-52 | 188 |
LLPS-Orn-3820 | Oreochromis niloticus | 84.26 | 1e-52 | 188 |
LLPS-Scm-0400 | Scophthalmus maximus | 84.26 | 2e-52 | 187 |
LLPS-Mea-1708 | Mesocricetus auratus | 83.61 | 0.0 | 568 |
LLPS-Dar-2637 | Danio rerio | 80.0 | 2e-53 | 190 |
LLPS-Pof-0698 | Poecilia formosa | 80.0 | 4e-55 | 194 |
LLPS-Myl-1915 | Myotis lucifugus | 78.7 | 7e-48 | 169 |
LLPS-Mod-0334 | Monodelphis domestica | 78.7 | 6e-46 | 170 |
LLPS-Anc-2814 | Anolis carolinensis | 78.7 | 5e-47 | 172 |
LLPS-Lac-4065 | Latimeria chalumnae | 78.18 | 2e-46 | 170 |
LLPS-Pes-1974 | Pelodiscus sinensis | 77.78 | 8e-48 | 169 |
LLPS-Gaa-1802 | Gasterosteus aculeatus | 77.06 | 6e-45 | 165 |
LLPS-Fia-3825 | Ficedula albicollis | 76.85 | 1e-46 | 171 |
LLPS-Meg-1205 | Meleagris gallopavo | 76.85 | 2e-46 | 170 |
LLPS-Gaga-3785 | Gallus gallus | 76.85 | 2e-46 | 170 |
LLPS-Scf-1908 | Scleropages formosus | 76.58 | 3e-45 | 166 |
LLPS-Urm-3805 | Ursus maritimus | 75.48 | 2e-131 | 392 |
LLPS-Ten-1172 | Tetraodon nigroviridis | 75.0 | 5e-44 | 163 |
LLPS-Tag-2392 | Taeniopygia guttata | 74.55 | 3e-44 | 159 |
LLPS-Xet-3732 | Xenopus tropicalis | 70.75 | 2e-54 | 192 |
LLPS-Sah-0094 | Sarcophilus harrisii | 64.36 | 1e-93 | 291 |
LLPS-Tar-0888 | Takifugu rubripes | 58.82 | 2e-54 | 192 |
LLPS-Ora-3094 | Ornithorhynchus anatinus | 56.28 | 1e-58 | 197 |