DrLLPS - Data resource of LLPS

LLPS-Icp-3303
snrpa

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	U1 small nuclear ribonucleoprotein A
Gene Name:	snrpa
Ensembl Gene:	ENSIPUG00000008841.1
Ensembl Protein:	ENSIPUP00000012983.1
Organism:	Ictalurus punctatus
Taxa ID:	7998
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nuclear speckle, Nucleolus, P-body	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Mus musculus	LLPS-Mum-2108	Q62189	Client	Nucleolus	97.53	3e-48	168
Homo sapiens	LLPS-Hos-1937	P09012	Client	Nuclear speckle, Nucleolus, P-body	97.53	4e-48	167

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	ENSIPUT00000013526.1	ENSIPUP00000012983.1
UniProt		W5U982, W5U982_ICTPU
GeneBank	JT409011	AHH38528.1
RefSeq	, XM_017465766.1	, XP_017321255.1, XP_017321255.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MSSQELRLNH TIYINNLNEK IKKDELKKSL YAIFSQFGQI LDILVARTVK MRGQAFVIFK 60 61 EVNSASNALR SMQGFPFYDK PMRIQYAKQD SDIIAKMKGT YVERDRKKEK KKPKTTESGG 120 121 SKKGAAAGMA GVPAAMPGMP PMSQAPRMMP MPGQPPYMPP PGMMPPPGMG PGQMPPGAMP 180 181 PGQMMPGQMP GQMPQQVSEN PPNHILFLTN LPEETNELML SMLFNQFPGF KEVRLVPGRH 240 241 DIAFVEFDNE VQAGAAREAL QGFKITQTNA MKISFAKK 278
Nucleotide CDS Sequence (FASTA)
1 ATGTCTAGCC AGGAGCTGCG CCTAAACCAC ACCATTTACA TCAACAATCT GAATGAGAAA 60 61 ATCAAAAAAG ATGAACTGAA GAAGTCGCTT TATGCTATTT TCTCACAGTT TGGCCAGATA 120 121 CTGGATATCC TCGTTGCCCG GACGGTCAAA ATGAGGGGTC AGGCCTTTGT AATCTTCAAA 180 181 GAGGTCAACA GTGCCTCCAA CGCTCTGAGA TCTATGCAGG GCTTTCCTTT TTATGATAAA 240 241 CCCATGCGCA TTCAGTATGC CAAACAAGAC TCGGACATTA TTGCCAAGAT GAAGGGCACG 300 301 TATGTGGAGC GGGATCGCAA GAAGGAGAAG AAGAAGCCTA AAACTACTGA GTCGGGAGGG 360 361 TCGAAGAAGG GTGCTGCTGC TGGCATGGCT GGAGTTCCTG CTGCTATGCC TGGAATGCCT 420 421 CCTATGAGTC AAGCTCCTCG TATGATGCCA ATGCCAGGTC AGCCTCCGTA CATGCCGCCT 480 481 CCTGGTATGA TGCCACCCCC AGGTATGGGC CCTGGCCAGA TGCCACCAGG TGCCATGCCT 540 541 CCAGGTCAGA TGATGCCTGG GCAAATGCCA GGACAGATGC CTCAGCAGGT CTCGGAGAAC 600 601 CCGCCTAACC ACATCCTGTT CCTCACCAAC CTGCCAGAGG AGACCAACGA GCTCATGCTG 660 661 TCCATGCTGT TTAATCAGTT CCCGGGGTTC AAAGAGGTGC GTCTTGTCCC GGGTCGTCAC 720 721 GACATCGCCT TTGTGGAGTT TGACAATGAA GTGCAGGCCG GTGCAGCCAG GGAAGCGTTA 780 781 CAGGGCTTCA AGATTACACA GACTAACGCA ATGAAGATCT CGTTTGCCAA GAAATAA 837

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Asm-2129	Astyanax mexicanus	100.0	2e-50	173
LLPS-Scf-0665	Scleropages formosus	98.78	4e-49	170
LLPS-Dar-3475	Danio rerio	98.78	2e-49	171
LLPS-Ten-1571	Tetraodon nigroviridis	98.78	2e-49	171
LLPS-Xim-2750	Xiphophorus maculatus	97.56	4e-49	170
LLPS-Tar-1769	Takifugu rubripes	97.56	2e-49	171
LLPS-Pof-0342	Poecilia formosa	97.56	5e-49	169
LLPS-Lac-2672	Latimeria chalumnae	97.56	2e-49	171
LLPS-Caf-0179	Canis familiaris	96.67	1e-11	65.9
LLPS-Leo-2150	Lepisosteus oculatus	96.34	3e-48	168
LLPS-Sus-4620	Sus scrofa	96.34	2e-48	168
LLPS-Sah-3688	Sarcophilus harrisii	96.34	2e-48	168
LLPS-Cea-3357	Cercocebus atys	96.34	2e-48	168
LLPS-Aon-2002	Aotus nancymaae	96.34	1e-48	168
LLPS-Mum-2108	Mus musculus	96.34	2e-48	168
LLPS-Maf-1916	Macaca fascicularis	96.34	2e-48	168
LLPS-Mea-1095	Mesocricetus auratus	96.34	2e-48	168
LLPS-Chs-0113	Chlorocebus sabaeus	96.34	2e-48	168
LLPS-Ora-0093	Ornithorhynchus anatinus	96.34	1e-49	167
LLPS-Fud-0636	Fukomys damarensis	96.34	2e-48	168
LLPS-Caj-0977	Callithrix jacchus	96.34	3e-48	168
LLPS-Gog-3379	Gorilla gorilla	96.34	2e-48	168
LLPS-Dio-3552	Dipodomys ordii	96.34	2e-48	168
LLPS-Bot-3197	Bos taurus	96.34	2e-48	168
LLPS-Paa-1040	Papio anubis	96.34	2e-48	168
LLPS-Mal-0632	Mandrillus leucophaeus	96.34	2e-48	168
LLPS-Myl-2014	Myotis lucifugus	96.34	2e-48	168
LLPS-Ova-1853	Ovis aries	96.34	2e-48	168
LLPS-Mup-0696	Mustela putorius furo	96.34	2e-48	168
LLPS-Aim-1499	Ailuropoda melanoleuca	96.34	2e-48	168
LLPS-Ran-0365	Rattus norvegicus	96.34	2e-48	168
LLPS-Man-2455	Macaca nemestrina	96.34	2e-48	168
LLPS-Hos-1937	Homo sapiens	96.34	2e-48	168
LLPS-Urm-1661	Ursus maritimus	96.34	3e-48	168
LLPS-Pap-3583	Pan paniscus	96.34	2e-48	168
LLPS-Pat-1670	Pan troglodytes	96.34	2e-48	168
LLPS-Fec-0946	Felis catus	96.34	3e-48	168
LLPS-Mod-1513	Monodelphis domestica	96.34	2e-48	168
LLPS-Fia-0349	Ficedula albicollis	96.34	3e-48	168
LLPS-Rhb-0139	Rhinopithecus bieti	96.34	2e-48	168
LLPS-Orn-1224	Oreochromis niloticus	96.34	3e-48	168
LLPS-Otg-0487	Otolemur garnettii	96.34	2e-48	168
LLPS-Mam-3763	Macaca mulatta	96.34	2e-48	168
LLPS-Poa-1260	Pongo abelii	96.34	2e-48	168
LLPS-Cap-1023	Cavia porcellus	96.34	2e-48	168
LLPS-Eqc-2324	Equus caballus	96.34	3e-48	168
LLPS-Nol-2437	Nomascus leucogenys	96.34	9e-49	168
LLPS-Anc-0909	Anolis carolinensis	96.34	6e-49	168
LLPS-Ict-0999	Ictidomys tridecemlineatus	96.34	2e-48	168
LLPS-Cas-1675	Carlito syrichta	96.34	2e-48	168
LLPS-Orl-2736	Oryzias latipes	95.12	5e-48	167
LLPS-Gaa-2855	Gasterosteus aculeatus	95.12	3e-48	167
LLPS-Xet-3048	Xenopus tropicalis	95.12	1e-48	169
LLPS-Scm-0829	Scophthalmus maximus	95.06	5e-48	166
LLPS-Loa-1312	Loxodonta africana	88.68	7e-60	198
LLPS-Orc-0603	Oryctolagus cuniculus	88.68	1e-60	200
LLPS-Pes-1730	Pelodiscus sinensis	87.74	2e-60	199
LLPS-Anp-1917	Anas platyrhynchos	84.15	4e-42	152
LLPS-Meg-0844	Meleagris gallopavo	84.15	1e-42	152
LLPS-Tag-2340	Taeniopygia guttata	84.15	4e-42	150
LLPS-Gaga-2994	Gallus gallus	84.15	1e-42	152
LLPS-Drm-1677	Drosophila melanogaster	82.72	9e-40	144
LLPS-Tut-0910	Tursiops truncatus	81.71	2e-40	145
LLPS-Cii-0947	Ciona intestinalis	79.0	6e-43	152
LLPS-Cis-0312	Ciona savignyi	75.31	4e-34	130
LLPS-Viv-0855	Vitis vinifera	71.74	2e-40	145
LLPS-Met-1296	Medicago truncatula	71.43	7e-43	153
LLPS-Php-0635	Physcomitrella patens	71.28	4e-35	132
LLPS-Mua-0093	Musa acuminata	70.41	2e-41	149
LLPS-Amt-0124	Amborella trichopoda	69.51	5e-33	126
LLPS-Zem-0266	Zea mays	69.39	3e-39	144
LLPS-Gor-0414	Gossypium raimondii	68.93	2e-42	151
LLPS-Hea-0548	Helianthus annuus	68.63	4e-41	148
LLPS-Nia-1602	Nicotiana attenuata	68.57	2e-43	154
LLPS-Orb-0289	Oryza barthii	68.37	4e-36	142
LLPS-Ori-0514	Oryza indica	68.37	1e-38	142
LLPS-Orni-2127	Oryza nivara	68.37	4e-36	142
LLPS-Orgl-1508	Oryza glumaepatula	68.37	4e-36	142
LLPS-Ors-0194	Oryza sativa	68.37	1e-38	142
LLPS-Sob-0282	Sorghum bicolor	68.37	7e-39	142
LLPS-Orm-1695	Oryza meridionalis	68.37	4e-36	142
LLPS-Orr-0430	Oryza rufipogon	68.37	5e-36	142
LLPS-Org-1970	Oryza glaberrima	68.37	4e-36	142
LLPS-Thc-0229	Theobroma cacao	68.27	7e-42	150
LLPS-Via-2183	Vigna angularis	67.62	2e-43	154
LLPS-Orp-1675	Oryza punctata	67.35	1e-35	141
LLPS-Coc-1404	Corchorus capsularis	67.31	2e-42	152
LLPS-Dac-1388	Daucus carota	67.02	7e-39	142
LLPS-Sol-1651	Solanum lycopersicum	66.67	3e-41	151
LLPS-Glm-0462	Glycine max	66.67	2e-42	151
LLPS-Sot-1999	Solanum tuberosum	66.67	3e-42	151
LLPS-Cus-1765	Cucumis sativus	66.67	4e-42	150
LLPS-Pot-1709	Populus trichocarpa	66.67	5e-41	148
LLPS-Sei-0242	Setaria italica	66.33	2e-37	139
LLPS-Phv-0227	Phaseolus vulgaris	65.91	1e-33	128
LLPS-Mae-0585	Manihot esculenta	65.71	4e-41	148
LLPS-Prp-0117	Prunus persica	65.71	3e-42	151
LLPS-Cae-1229	Caenorhabditis elegans	65.0	3e-43	153
LLPS-Chr-0133	Chlamydomonas reinhardtii	64.86	4e-25	105
LLPS-Brd-0669	Brachypodium distachyon	64.29	7e-37	137
LLPS-Vir-0010	Vigna radiata	63.46	2e-40	145
LLPS-Hov-1141	Hordeum vulgare	63.27	2e-36	135
LLPS-Tra-1424	Triticum aestivum	63.27	7e-36	134
LLPS-Tru-0572	Triticum urartu	62.24	1e-35	134
LLPS-Sem-1417	Selaginella moellendorffii	61.76	8e-39	142
LLPS-Arl-0182	Arabidopsis lyrata	61.32	7e-41	147
LLPS-Brn-1798	Brassica napus	60.78	3e-38	140
LLPS-Brr-0431	Brassica rapa	60.78	2e-38	140
LLPS-Art-1318	Arabidopsis thaliana	60.0	1e-35	134
LLPS-Bro-1087	Brassica oleracea	59.8	6e-38	139
LLPS-Gas-0799	Galdieria sulphuraria	59.38	3e-34	130
LLPS-Lep-0080	Leersia perrieri	56.41	3e-23	100
LLPS-Orbr-1453	Oryza brachyantha	53.85	3e-22	97.1
LLPS-Asn-0128	Aspergillus nidulans	50.0	2e-29	115
LLPS-Abg-0384	Absidia glauca	50.0	2e-25	103
LLPS-Pyt-0634	Pyrenophora teres	50.0	4e-26	107
LLPS-Osl-0067	Ostreococcus lucimarinus	49.52	3e-31	121
LLPS-Pytr-0937	Pyrenophora triticirepentis	49.49	6e-28	111
LLPS-Phn-0492	Phaeosphaeria nodorum	49.46	8e-29	114
LLPS-Cogr-1290	Colletotrichum graminicola	48.94	3e-26	107
LLPS-Asc-1671	Aspergillus clavatus	48.39	2e-27	110
LLPS-Lem-1334	Leptosphaeria maculans	48.39	2e-27	110
LLPS-Ast-0381	Aspergillus terreus	48.39	2e-27	110
LLPS-Coo-0145	Colletotrichum orbiculare	47.87	2e-25	105
LLPS-Blg-1575	Blumeria graminis	47.87	2e-25	105
LLPS-Cog-0418	Colletotrichum gloeosporioides	47.87	3e-26	107
LLPS-Asni-0667	Aspergillus niger	47.31	7e-27	108
LLPS-Ved-0614	Verticillium dahliae	46.67	4e-24	101
LLPS-Trr-1635	Trichoderma reesei	46.46	1e-25	105
LLPS-Zyt-1539	Zymoseptoria tritici	46.32	9e-25	100
LLPS-Dos-0127	Dothistroma septosporum	46.32	9e-25	103
LLPS-Aso-0661	Aspergillus oryzae	46.24	3e-25	104
LLPS-Nec-1118	Neurospora crassa	45.26	3e-24	102
LLPS-Tum-1334	Tuber melanosporum	45.16	1e-24	101
LLPS-Trv-1339	Trichoderma virens	44.44	9e-25	103
LLPS-Fuv-1431	Fusarium verticillioides	43.43	2e-23	99.8
LLPS-Fuo-1239	Fusarium oxysporum	43.43	2e-23	99.8

LLPS-Icp-3303snrpa

Protein Sequence

Nucleotide Sequence

LLPS-Icp-3303
snrpa