LLPS-Icp-1893
SOX2
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | transcription factor SOX-2 |
| Gene Name: | SOX2, sox2 |
| Ensembl Gene: | ENSIPUG00000024592.1 |
| Ensembl Protein: | ENSIPUP00000036717.1 |
| Organism: | Ictalurus punctatus |
| Taxa ID: | 7998 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSIPUT00000038153.1 | ENSIPUP00000036717.1 |
| UniProt | W5UF16, W5UF16_ICTPU | |
| GeneBank | JT408091 | AHH38232.1 |
| RefSeq | , XM_017478981.1 | , XP_017334470.1, XP_017334470.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MYNMMETELK PNPGGNNTGT GNTGGGTPGQ KNSPERVKRP MNAFMVWSRG QRRKMAQENP 60 61 KMHNSEISKR LGAEWKLLSE SEKRPFIDEA KRLRALHMKE HPDYKYRPRR KTKTLMKKDK 120 121 YALPGGLLAP GGGGGGNLGG NGMSAGVGSG LGGLGVNLGV NQRMDAYAHM NGCWSNGGYG 180 181 MMQEQLGYAA AASPMQQQQQ QHHVHRYDMS ALQPYGSMTS AQTYMNGSPT YSMSSYPQLS 240 241 SMGSAVKSEA SSSPPAVTSA SHVRAAAAPA PAHAPPPPSC QTGDLRDMIS MYLPGAEVAE 300 301 QTGQSRLHLS QHYQSAPVHA TTINGTIPLS HMTE 334 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTACAACA TGATGGAGAC CGAGTTGAAA CCCAATCCCG GGGGTAATAA CACCGGCACC 60 61 GGGAACACCG GAGGCGGCAC ACCGGGGCAG AAGAACAGTC CGGAGCGCGT AAAGAGGCCC 120 121 ATGAACGCGT TCATGGTGTG GTCCCGCGGT CAACGGCGGA AAATGGCGCA AGAGAACCCG 180 181 AAGATGCACA ACTCGGAGAT CAGTAAGAGG CTGGGCGCTG AGTGGAAGCT GCTGTCCGAG 240 241 TCTGAGAAGC GGCCGTTCAT CGACGAGGCC AAGCGGCTGC GCGCACTGCA CATGAAGGAG 300 301 CACCCGGACT ACAAGTACCG ACCGCGGCGG AAGACCAAGA CTCTCATGAA GAAGGACAAG 360 361 TACGCGCTGC CCGGCGGGCT CCTGGCACCG GGCGGCGGTG GCGGCGGAAA CCTAGGTGGT 420 421 AACGGCATGA GCGCCGGCGT GGGCTCGGGC CTCGGCGGCC TCGGCGTCAA CCTCGGGGTC 480 481 AATCAGAGGA TGGACGCGTA CGCGCATATG AACGGCTGCT GGAGCAACGG AGGCTACGGC 540 541 ATGATGCAGG AGCAACTGGG CTACGCGGCG GCGGCGAGTC CCATGCAGCA GCAGCAGCAG 600 601 CAGCACCACG TCCACCGCTA TGACATGAGC GCGCTGCAGC CGTACGGCTC CATGACGAGC 660 661 GCGCAGACCT ACATGAACGG CTCACCCACA TACAGCATGT CGTCTTACCC GCAGCTCAGC 720 721 TCCATGGGCT CAGCTGTGAA ATCCGAGGCC AGCTCGAGTC CACCCGCTGT CACGTCCGCG 780 781 TCGCACGTCA GAGCCGCCGC AGCGCCCGCA CCTGCACACG CACCGCCGCC GCCCTCGTGC 840 841 CAAACCGGGG ACCTGCGGGA CATGATCAGC ATGTATCTGC CCGGGGCGGA AGTGGCCGAA 900 901 CAGACGGGCC AGAGCAGACT GCACCTGTCG CAGCACTACC AGAGTGCACC TGTGCACGCA 960 961 ACTACGATTA ACGGCACCAT CCCGTTATCG CACATGACTG AGTGA 1005 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Orl-2525 | Oryzias latipes | 93.1 | 2e-50 | 174 |
| LLPS-Lac-2488 | Latimeria chalumnae | 91.95 | 3e-50 | 174 |
| LLPS-Dar-2444 | Danio rerio | 91.95 | 3e-50 | 174 |
| LLPS-Pof-1990 | Poecilia formosa | 91.95 | 4e-50 | 174 |
| LLPS-Orn-0741 | Oreochromis niloticus | 91.95 | 4e-50 | 173 |
| LLPS-Leo-2118 | Lepisosteus oculatus | 91.95 | 2e-50 | 174 |
| LLPS-Tar-3651 | Takifugu rubripes | 91.95 | 5e-50 | 173 |
| LLPS-Xim-3969 | Xiphophorus maculatus | 91.95 | 4e-50 | 174 |
| LLPS-Scf-0417 | Scleropages formosus | 91.95 | 2e-50 | 174 |
| LLPS-Asm-3110 | Astyanax mexicanus | 91.76 | 9e-49 | 169 |
| LLPS-Sus-1335 | Sus scrofa | 91.67 | 2e-39 | 145 |
| LLPS-Fec-4197 | Felis catus | 90.8 | 4e-49 | 172 |
| LLPS-Hos-4672 | Homo sapiens | 90.8 | 4e-49 | 172 |
| LLPS-Man-3383 | Macaca nemestrina | 90.8 | 3e-49 | 172 |
| LLPS-Eqc-1932 | Equus caballus | 90.8 | 4e-49 | 172 |
| LLPS-Poa-4396 | Pongo abelii | 90.8 | 4e-49 | 172 |
| LLPS-Mam-2088 | Macaca mulatta | 90.8 | 4e-49 | 172 |
| LLPS-Chs-0027 | Chlorocebus sabaeus | 90.8 | 4e-49 | 172 |
| LLPS-Mum-0681 | Mus musculus | 90.8 | 3e-49 | 172 |
| LLPS-Cea-2970 | Cercocebus atys | 90.8 | 4e-49 | 172 |
| LLPS-Caj-0118 | Callithrix jacchus | 90.8 | 4e-49 | 172 |
| LLPS-Bot-1841 | Bos taurus | 90.8 | 4e-49 | 172 |
| LLPS-Scm-1019 | Scophthalmus maximus | 89.66 | 3e-49 | 171 |
| LLPS-Mea-3401 | Mesocricetus auratus | 89.47 | 2e-41 | 153 |
| LLPS-Mup-1237 | Mustela putorius furo | 89.47 | 1e-41 | 153 |
| LLPS-Mod-3633 | Monodelphis domestica | 88.51 | 5e-49 | 170 |
| LLPS-Pap-1239 | Pan paniscus | 88.51 | 6e-49 | 170 |
| LLPS-Urm-3458 | Ursus maritimus | 88.51 | 6e-49 | 170 |
| LLPS-Pat-2379 | Pan troglodytes | 88.51 | 6e-49 | 170 |
| LLPS-Loa-1571 | Loxodonta africana | 88.51 | 7e-49 | 170 |
| LLPS-Anp-1229 | Anas platyrhynchos | 88.51 | 5e-49 | 171 |
| LLPS-Orc-3842 | Oryctolagus cuniculus | 88.51 | 7e-48 | 171 |
| LLPS-Fia-3678 | Ficedula albicollis | 88.51 | 5e-49 | 171 |
| LLPS-Cap-0324 | Cavia porcellus | 88.51 | 6e-49 | 170 |
| LLPS-Ten-1293 | Tetraodon nigroviridis | 88.51 | 9e-49 | 169 |
| LLPS-Xet-0765 | Xenopus tropicalis | 88.51 | 8e-49 | 170 |
| LLPS-Gaga-2771 | Gallus gallus | 88.51 | 6e-49 | 170 |
| LLPS-Tag-1945 | Taeniopygia guttata | 88.51 | 5e-49 | 171 |
| LLPS-Nol-3174 | Nomascus leucogenys | 88.51 | 6e-49 | 170 |
| LLPS-Ict-1220 | Ictidomys tridecemlineatus | 88.51 | 6e-49 | 170 |
| LLPS-Maf-3366 | Macaca fascicularis | 88.51 | 6e-49 | 170 |
| LLPS-Aon-2806 | Aotus nancymaae | 88.51 | 6e-49 | 170 |
| LLPS-Sah-1156 | Sarcophilus harrisii | 88.51 | 5e-49 | 170 |
| LLPS-Gog-2596 | Gorilla gorilla | 88.51 | 6e-49 | 170 |
| LLPS-Fud-2614 | Fukomys damarensis | 88.51 | 5e-49 | 170 |
| LLPS-Dio-2480 | Dipodomys ordii | 88.51 | 7e-49 | 170 |
| LLPS-Ran-3654 | Rattus norvegicus | 88.51 | 6e-49 | 170 |
| LLPS-Ova-4131 | Ovis aries | 88.51 | 6e-49 | 170 |
| LLPS-Paa-1832 | Papio anubis | 88.51 | 6e-49 | 170 |
| LLPS-Cas-3473 | Carlito syrichta | 81.25 | 3e-40 | 147 |
| LLPS-Caf-3596 | Canis familiaris | 80.0 | 6e-40 | 146 |
| LLPS-Tut-2123 | Tursiops truncatus | 80.0 | 3e-40 | 145 |
| LLPS-Myl-4457 | Myotis lucifugus | 80.0 | 1e-39 | 145 |
| LLPS-Aim-0598 | Ailuropoda melanoleuca | 78.79 | 3e-30 | 119 |
| LLPS-Otg-2903 | Otolemur garnettii | 78.75 | 7e-39 | 143 |
| LLPS-Rhb-3726 | Rhinopithecus bieti | 78.75 | 5e-39 | 144 |
| LLPS-Mal-2934 | Mandrillus leucophaeus | 78.75 | 5e-39 | 144 |
| LLPS-Meg-0563 | Meleagris gallopavo | 64.2 | 2e-28 | 116 |
| LLPS-Pes-2306 | Pelodiscus sinensis | 64.2 | 9e-29 | 119 |
| LLPS-Ora-2088 | Ornithorhynchus anatinus | 64.2 | 2e-28 | 118 |
| LLPS-Gaa-1403 | Gasterosteus aculeatus | 63.41 | 9e-29 | 119 |