LLPS-Icp-1421
papd4
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Poly(A) RNA polymerase GLD2 |
Gene Name: | papd4 |
Ensembl Gene: | ENSIPUG00000019140.1 |
Ensembl Protein: | ENSIPUP00000028311.1 |
Organism: | Ictalurus punctatus |
Taxa ID: | 7998 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Others | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSIPUT00000029461.1 | ENSIPUP00000028311.1 |
Ensembl | ENSIPUT00000029441.1 | ENSIPUP00000028292.1 |
UniProt | W5UME5, W5UME5_ICTPU | |
GeneBank | JT418848 | AHH42870.1 |
RefSeq | , XM_017452511.1 | , XP_017308000.1, XP_017308000.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MFPRSPVFPH KHGHVITPGI LPHTSQQQRT ETHLTLNDTN LHGQPLNVFP VIPIYQWKAV 60 61 PEFSRTNPNG SKKRKSDGNT QHDLKRQRFG SSHPYGPPAK TGTYSPVPQG RSGGFVREIR 120 121 SPTRSPMHPP VSSKPACSVP LLKAESSQNS LPSHVIKDKL SQQILDLFHT CEQQSEDLEK 180 181 KEFCRAQLQI DIQRLFPCAR IFLAGSSLNG FGSRTSDADL CLVVQEGPIN QKTDAVYILS 240 241 LVQKLLYKTS YIERPQLIRA KVPILKFKDR VSGVEFDLNV NNTVGLRNTF LLRTYAYLEK 300 301 RVRPIILVIK KWASHHRIND ASRGTLSSYT LVLMVLHYLQ TLPDPVIPCL QKDYPECFNP 360 361 VMDIHLVPEG PKNIPPFVSK NQSSLGDLLL GFLKYYATVF RWDKYIISVR EAKALPKANC 420 421 WEWRSKFLYV EEPFDGSNTA RAVHEKIKFD AIKAVFAESW QVLQERKDLN CILPIRETIP 480 481 KR 482 |
Nucleotide CDS Sequence (FASTA) |
1 ATGTTTCCGA GGTCTCCAGT CTTCCCCCAC AAACATGGGC ACGTTATCAC CCCGGGTATT 60 61 TTACCCCACA CCTCACAGCA GCAAAGAACT GAAACCCATC TGACTCTAAA TGACACAAAC 120 121 TTGCACGGCC AACCTTTGAA TGTATTCCCC GTTATCCCGA TATATCAGTG GAAAGCTGTG 180 181 CCGGAATTTT CTCGCACCAA TCCAAACGGA TCCAAGAAGA GGAAAAGTGA TGGAAACACG 240 241 CAGCATGACC TGAAGAGGCA GCGCTTCGGT TCTTCCCATC CATATGGACC CCCGGCCAAA 300 301 ACGGGCACTT ATAGCCCAGT GCCTCAGGGG CGATCCGGTG GGTTTGTGAG AGAGATCCGT 360 361 TCTCCTACTC GCTCTCCTAT GCACCCTCCG GTCAGCTCTA AACCAGCATG TAGTGTGCCG 420 421 CTTCTCAAAG CGGAGTCCAG TCAGAATTCC TTGCCGTCAC ACGTTATCAA AGATAAGCTG 480 481 AGCCAACAGA TTTTGGATCT GTTCCACACT TGTGAGCAGC AGAGCGAGGA CTTGGAGAAG 540 541 AAGGAATTCT GTCGTGCGCA GTTACAGATC GATATTCAGA GACTCTTCCC ATGTGCGCGG 600 601 ATATTCCTGG CAGGGTCGTC TCTGAACGGT TTCGGTAGTC GGACCAGCGA CGCCGATTTA 660 661 TGTCTTGTCG TTCAAGAGGG TCCAATTAAC CAGAAAACAG ATGCAGTGTA CATACTCAGT 720 721 CTTGTGCAGA AACTGCTATA CAAAACGTCT TACATCGAGA GACCTCAGCT CATCCGAGCA 780 781 AAAGTGCCAA TACTGAAGTT CAAGGACCGA GTCAGCGGCG TGGAGTTTGA TTTGAACGTT 840 841 AACAACACCG TGGGACTCAG AAACACTTTC CTGTTGCGGA CGTACGCATA CCTTGAAAAG 900 901 CGTGTTCGCC CCATCATCCT TGTGATCAAG AAGTGGGCCA GTCACCACAG GATCAATGAT 960 961 GCAAGCCGCG GAACCCTGAG CAGCTACACA CTGGTCCTGA TGGTCCTACA TTACCTCCAG 1020 1021 ACTCTTCCAG ACCCTGTCAT TCCTTGCCTT CAAAAGGATT ATCCAGAGTG TTTCAACCCT 1080 1081 GTAATGGATA TTCATCTCGT ACCAGAAGGA CCCAAGAACA TTCCTCCTTT TGTGTCAAAG 1140 1141 AACCAGTCAT CTCTTGGAGA CTTGCTGCTT GGCTTCCTGA AATACTATGC CACAGTTTTC 1200 1201 AGATGGGACA AGTACATCAT CTCTGTCCGT GAAGCAAAAG CTCTGCCTAA GGCAAACTGC 1260 1261 TGGGAATGGA GAAGCAAGTT CCTTTATGTG GAGGAACCAT TTGATGGCTC GAACACAGCC 1320 1321 AGAGCAGTTC ATGAAAAAAT CAAGTTTGAT GCCATCAAAG CAGTTTTCGC AGAGTCCTGG 1380 1381 CAGGTGCTGC AAGAGAGGAA AGATCTGAAC TGCATTTTAC CCATCAGAGA GACAATCCCG 1440 1441 AAAAGATAA 1449 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Asm-3687 | Astyanax mexicanus | 72.01 | 0.0 | 709 |
LLPS-Cas-0283 | Carlito syrichta | 68.67 | 8e-161 | 472 |
LLPS-Gaa-0561 | Gasterosteus aculeatus | 63.89 | 3e-100 | 306 |
LLPS-Scm-0809 | Scophthalmus maximus | 63.74 | 3e-155 | 458 |
LLPS-Leo-1263 | Lepisosteus oculatus | 62.79 | 0.0 | 588 |
LLPS-Dar-3007 | Danio rerio | 62.76 | 0.0 | 599 |
LLPS-Pes-3469 | Pelodiscus sinensis | 61.54 | 2e-174 | 507 |
LLPS-Mod-1762 | Monodelphis domestica | 60.77 | 6e-169 | 493 |
LLPS-Anc-0814 | Anolis carolinensis | 60.34 | 2e-170 | 496 |
LLPS-Fud-3951 | Fukomys damarensis | 59.76 | 3e-162 | 475 |
LLPS-Eqc-1007 | Equus caballus | 59.57 | 2e-163 | 478 |
LLPS-Fia-3425 | Ficedula albicollis | 58.71 | 4e-169 | 494 |
LLPS-Sah-0250 | Sarcophilus harrisii | 58.51 | 8e-159 | 467 |
LLPS-Lac-1764 | Latimeria chalumnae | 58.05 | 8e-178 | 516 |
LLPS-Cap-2993 | Cavia porcellus | 56.6 | 3e-163 | 478 |
LLPS-Tag-0745 | Taeniopygia guttata | 55.69 | 9e-153 | 452 |
LLPS-Xet-2731 | Xenopus tropicalis | 55.5 | 1e-155 | 460 |
LLPS-Bot-1256 | Bos taurus | 55.0 | 4e-162 | 479 |
LLPS-Xim-1741 | Xiphophorus maculatus | 54.96 | 5e-144 | 429 |
LLPS-Mea-0247 | Mesocricetus auratus | 54.56 | 2e-163 | 479 |
LLPS-Mum-3330 | Mus musculus | 54.37 | 7e-164 | 479 |
LLPS-Ran-0895 | Rattus norvegicus | 54.37 | 8e-165 | 482 |
LLPS-Caf-2654 | Canis familiaris | 54.2 | 3e-165 | 483 |
LLPS-Aon-2644 | Aotus nancymaae | 54.2 | 2e-166 | 486 |
LLPS-Ict-3957 | Ictidomys tridecemlineatus | 54.17 | 2e-165 | 483 |
LLPS-Nol-3319 | Nomascus leucogenys | 54.17 | 3e-164 | 481 |
LLPS-Urm-3989 | Ursus maritimus | 53.97 | 3e-163 | 478 |
LLPS-Rhb-1303 | Rhinopithecus bieti | 53.97 | 8e-164 | 479 |
LLPS-Chs-4616 | Chlorocebus sabaeus | 53.97 | 3e-164 | 481 |
LLPS-Aim-4237 | Ailuropoda melanoleuca | 53.97 | 2e-163 | 478 |
LLPS-Dio-4208 | Dipodomys ordii | 53.91 | 3e-163 | 478 |
LLPS-Sus-3135 | Sus scrofa | 53.78 | 3e-162 | 476 |
LLPS-Fec-4586 | Felis catus | 53.77 | 2e-162 | 476 |
LLPS-Pat-4273 | Pan troglodytes | 53.77 | 7e-164 | 480 |
LLPS-Pap-1339 | Pan paniscus | 53.77 | 7e-164 | 480 |
LLPS-Hos-4663 | Homo sapiens | 53.77 | 3e-163 | 478 |
LLPS-Maf-4441 | Macaca fascicularis | 53.77 | 2e-163 | 479 |
LLPS-Cea-2597 | Cercocebus atys | 53.77 | 2e-163 | 479 |
LLPS-Gog-3511 | Gorilla gorilla | 53.77 | 3e-163 | 478 |
LLPS-Paa-1612 | Papio anubis | 53.77 | 2e-163 | 479 |
LLPS-Anp-2186 | Anas platyrhynchos | 53.66 | 1e-161 | 474 |
LLPS-Orc-1730 | Oryctolagus cuniculus | 53.66 | 7e-164 | 479 |
LLPS-Man-2008 | Macaca nemestrina | 53.57 | 4e-163 | 478 |
LLPS-Pof-2042 | Poecilia formosa | 53.49 | 8e-151 | 446 |
LLPS-Gaga-3315 | Gallus gallus | 53.4 | 2e-169 | 494 |
LLPS-Otg-1147 | Otolemur garnettii | 53.37 | 4e-162 | 475 |
LLPS-Mup-3889 | Mustela putorius furo | 53.28 | 1e-161 | 474 |
LLPS-Tut-0080 | Tursiops truncatus | 52.98 | 2e-161 | 474 |
LLPS-Loa-3123 | Loxodonta africana | 52.96 | 2e-160 | 471 |
LLPS-Myl-0283 | Myotis lucifugus | 52.96 | 2e-161 | 473 |
LLPS-Orn-2913 | Oreochromis niloticus | 52.62 | 6e-160 | 469 |
LLPS-Caj-2229 | Callithrix jacchus | 52.43 | 1e-160 | 472 |
LLPS-Orl-2051 | Oryzias latipes | 52.28 | 1e-144 | 431 |
LLPS-Ova-0375 | Ovis aries | 52.01 | 2e-113 | 376 |
LLPS-Tar-2036 | Takifugu rubripes | 51.52 | 8e-118 | 361 |
LLPS-Mam-2411 | Macaca mulatta | 51.19 | 1e-148 | 440 |
LLPS-Mal-2383 | Mandrillus leucophaeus | 51.09 | 4e-148 | 439 |
LLPS-Poa-4388 | Pongo abelii | 50.6 | 9e-146 | 432 |
LLPS-Ora-3115 | Ornithorhynchus anatinus | 49.59 | 3e-134 | 405 |
LLPS-Cis-0554 | Ciona savignyi | 44.33 | 2e-64 | 216 |
LLPS-Cii-2091 | Ciona intestinalis | 43.85 | 8e-67 | 234 |
LLPS-Drm-1689 | Drosophila melanogaster | 42.12 | 2e-62 | 226 |
LLPS-Scf-3353 | Scleropages formosus | 37.31 | 1e-38 | 155 |
LLPS-Meg-2081 | Meleagris gallopavo | 36.63 | 3e-38 | 154 |
LLPS-Ten-3017 | Tetraodon nigroviridis | 35.09 | 3e-40 | 159 |
LLPS-Cae-0024 | Caenorhabditis elegans | 35.04 | 3e-63 | 227 |
LLPS-Blg-0578 | Blumeria graminis | 33.58 | 2e-31 | 133 |
LLPS-Zyt-0616 | Zymoseptoria tritici | 32.86 | 5e-31 | 129 |
LLPS-Aso-0848 | Aspergillus oryzae | 32.28 | 3e-35 | 141 |
LLPS-Asf-1151 | Aspergillus flavus | 32.06 | 1e-34 | 142 |
LLPS-Trv-0355 | Trichoderma virens | 32.0 | 7e-32 | 134 |
LLPS-Sem-0046 | Selaginella moellendorffii | 31.99 | 9e-42 | 157 |
LLPS-Nec-0002 | Neurospora crassa | 31.77 | 2e-31 | 133 |
LLPS-Crn-0868 | Cryptococcus neoformans | 31.56 | 1e-32 | 135 |
LLPS-Scs-0761 | Sclerotinia sclerotiorum | 31.55 | 5e-32 | 135 |
LLPS-Phv-2491 | Phaseolus vulgaris | 31.54 | 1e-39 | 156 |
LLPS-Cus-1967 | Cucumis sativus | 31.45 | 3e-40 | 158 |
LLPS-Coo-0371 | Colletotrichum orbiculare | 31.3 | 2e-31 | 133 |
LLPS-Cog-1504 | Colletotrichum gloeosporioides | 31.27 | 8e-33 | 137 |
LLPS-Art-0150 | Arabidopsis thaliana | 31.08 | 6e-40 | 157 |
LLPS-Arl-1367 | Arabidopsis lyrata | 31.08 | 6e-40 | 157 |
LLPS-Beb-1197 | Beauveria bassiana | 31.0 | 1e-30 | 131 |
LLPS-Brr-0210 | Brassica rapa | 30.98 | 3e-40 | 158 |
LLPS-Trr-0694 | Trichoderma reesei | 30.98 | 7e-34 | 140 |
LLPS-Glm-0778 | Glycine max | 30.98 | 1e-38 | 154 |
LLPS-Brn-2219 | Brassica napus | 30.98 | 2e-40 | 158 |
LLPS-Chc-0650 | Chondrus crispus | 30.9 | 7e-38 | 152 |
LLPS-Bro-0385 | Brassica oleracea | 30.74 | 2e-40 | 159 |
LLPS-Fus-0594 | Fusarium solani | 30.7 | 5e-32 | 135 |
LLPS-Gor-0743 | Gossypium raimondii | 30.67 | 3e-39 | 154 |
LLPS-Thc-0749 | Theobroma cacao | 30.45 | 4e-36 | 146 |
LLPS-Abg-0398 | Absidia glauca | 30.35 | 6e-32 | 135 |
LLPS-Mua-2506 | Musa acuminata | 30.34 | 7e-35 | 138 |
LLPS-Asc-0455 | Aspergillus clavatus | 30.25 | 2e-34 | 142 |
LLPS-Scc-0539 | Schizosaccharomyces cryophilus | 30.21 | 1e-35 | 143 |
LLPS-Nef-1272 | Neosartorya fischeri | 30.15 | 6e-33 | 137 |
LLPS-Asni-1085 | Aspergillus niger | 30.03 | 3e-34 | 142 |
LLPS-Via-1996 | Vigna angularis | 30.03 | 2e-39 | 155 |
LLPS-Org-1450 | Oryza glaberrima | 29.97 | 3e-39 | 150 |
LLPS-Brd-2346 | Brachypodium distachyon | 29.87 | 1e-37 | 151 |
LLPS-Nia-0886 | Nicotiana attenuata | 29.71 | 5e-37 | 149 |
LLPS-Met-0660 | Medicago truncatula | 29.71 | 3e-35 | 139 |
LLPS-Dac-0289 | Daucus carota | 29.65 | 5e-38 | 151 |
LLPS-Hea-1500 | Helianthus annuus | 29.63 | 6e-36 | 145 |
LLPS-Ors-0634 | Oryza sativa | 29.62 | 1e-39 | 152 |
LLPS-Pot-1854 | Populus trichocarpa | 29.62 | 2e-38 | 152 |
LLPS-Orr-0101 | Oryza rufipogon | 29.62 | 3e-39 | 155 |
LLPS-Orm-2027 | Oryza meridionalis | 29.62 | 3e-39 | 155 |
LLPS-Ori-0170 | Oryza indica | 29.62 | 1e-39 | 155 |
LLPS-Orni-0792 | Oryza nivara | 29.62 | 3e-39 | 156 |
LLPS-Mao-0607 | Magnaporthe oryzae | 29.61 | 8e-31 | 131 |
LLPS-Viv-2335 | Vitis vinifera | 29.58 | 7e-37 | 148 |
LLPS-Cogr-0823 | Colletotrichum graminicola | 29.43 | 7e-32 | 134 |
LLPS-Orgl-0889 | Oryza glumaepatula | 29.41 | 3e-39 | 156 |
LLPS-Prp-0020 | Prunus persica | 29.39 | 1e-33 | 139 |
LLPS-Sot-1066 | Solanum tuberosum | 29.39 | 3e-35 | 143 |
LLPS-Hov-2100 | Hordeum vulgare | 29.38 | 2e-37 | 150 |
LLPS-Scp-1243 | Schizosaccharomyces pombe | 29.28 | 1e-34 | 140 |
LLPS-Coc-1160 | Corchorus capsularis | 29.17 | 1e-34 | 142 |
LLPS-Sol-0724 | Solanum lycopersicum | 29.07 | 6e-36 | 146 |
LLPS-Php-0776 | Physcomitrella patens | 29.05 | 2e-31 | 133 |
LLPS-Tra-2298 | Triticum aestivum | 28.98 | 5e-37 | 149 |
LLPS-Asn-0456 | Aspergillus nidulans | 28.97 | 2e-32 | 135 |
LLPS-Mae-1276 | Manihot esculenta | 28.66 | 2e-36 | 147 |
LLPS-Tum-0072 | Tuber melanosporum | 28.57 | 2e-31 | 132 |
LLPS-Zem-1434 | Zea mays | 28.53 | 4e-37 | 148 |
LLPS-Amt-1689 | Amborella trichopoda | 28.43 | 5e-36 | 146 |
LLPS-Lep-0796 | Leersia perrieri | 28.34 | 6e-38 | 150 |
LLPS-Sob-0833 | Sorghum bicolor | 28.13 | 5e-35 | 142 |
LLPS-Vir-1303 | Vigna radiata | 28.12 | 5e-32 | 133 |
LLPS-Sei-0004 | Setaria italica | 27.8 | 3e-33 | 138 |
LLPS-Orbr-0057 | Oryza brachyantha | 27.71 | 3e-36 | 145 |