LLPS-Hos-3541
ISY1
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Pre-mRNA-splicing factor ISY1 homolog |
Gene Name: | ISY1, KIAA1160 |
Ensembl Gene: | ENSG00000261796.1 |
Ensembl Protein: | ENSP00000411822.1 |
Organism: | Homo sapiens |
Taxa ID: | 9606 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nuclear speckle, Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
May play a role in pre-mRNA splicing as component of the spliceosome. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENST00000418265.1 | ENSP00000411822.1 |
UniProt | Q9ULR0, ISY1_HUMAN, Q96IL2, Q9BT05 | |
GeneBank | AB032986, BC019849, BC007409, BC004442 | BAA86474.1, AAH07409.1, AAH19849.1, AAH04442.1 |
RefSeq | NM_001199469.1, NM_001204890.1, NM_020701.3 | NP_001186398.1, NP_001191819.1, NP_065752.1 |
Entrez | 100534599 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MARNAEKAMT ALARFRQAQL EEGKVKERRP FLASECTELP KAEKWRRQII GEISKKVAQI 60 61 QNAGLGEFRI RDLNDEINKL LREKGHWEVR IKELGGPDYG KVGPKMLDHE GKEVPGNRGY 120 121 KYFGAAKDLP GVRELFEKEP LPPPRKTRAE LMKAIDFEYY GYLDEDDGVI VPLEQEYEKK 180 181 LRAELVEKWK AEREARLARG EKEEEEEEEE EINIYAVTEE ESDEEGSQEK GGDDSQQKFI 240 241 AHVPVPSQQE IEEALVRRKK MELLQKYASE TLQAQSEEAR RLLGCRSGTR PARSGSAPSP 300 301 RATTAVPMGP SLPTTSPRGA PSCRCLTGLR M 331 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCCCGAA ATGCAGAAAA GGCCATGACG GCCTTAGCAA GATTTCGCCA GGCTCAGCTG 60 61 GAAGAGGGAA AAGTGAAGGA ACGAAGACCC TTTCTGGCCT CAGAATGTAC TGAACTGCCT 120 121 AAAGCTGAGA AGTGGAGACG ACAGATCATT GGAGAGATCT CTAAAAAAGT GGCTCAGATT 180 181 CAGAATGCTG GTTTAGGTGA ATTTCGAATT CGTGACCTGA ATGATGAAAT TAACAAGCTG 240 241 CTAAGGGAGA AAGGACACTG GGAGGTCCGG ATAAAGGAGC TGGGAGGTCC TGATTATGGA 300 301 AAAGTTGGCC CTAAAATGCT GGATCATGAA GGAAAAGAAG TCCCAGGAAA CCGAGGTTAC 360 361 AAGTACTTTG GAGCAGCAAA AGATTTGCCT GGTGTTAGAG AGCTGTTTGA AAAAGAACCT 420 421 CTTCCTCCTC CCAGAAAGAC ACGTGCTGAG CTCATGAAGG CAATCGATTT TGAGTACTAT 480 481 GGTTACCTAG ATGAAGATGA TGGTGTTATT GTGCCTTTGG AACAGGAATA TGAAAAGAAA 540 541 CTCAGAGCCG AGTTAGTGGA AAAGTGGAAA GCAGAGAGAG AGGCTCGGCT GGCAAGAGGA 600 601 GAAAAGGAAG AGGAGGAGGA AGAGGAGGAA GAGATCAACA TCTATGCAGT CACCGAGGAG 660 661 GAGTCGGACG AGGAAGGCAG CCAGGAGAAA GGAGGGGACG ACAGCCAGCA GAAGTTCATT 720 721 GCTCACGTCC CTGTTCCCTC GCAGCAAGAG ATTGAGGAGG CACTGGTGCG AAGGAAGAAA 780 781 ATGGAACTCC TCCAGAAGTA TGCAAGCGAG ACCCTGCAGG CCCAAAGTGA AGAAGCCAGA 840 841 AGGCTCCTGG GCTGCAGATC TGGGACACGG CCGGCCAGGA GCGGTTCCGC ACCATCACCC 900 901 AGAGCTACTA CCGCAGTGCC AATGGGGCCA TCCTTGCCTA CGACATCACC AAGAGGAGCT 960 961 CCTTCCTGTC GGTGCCTCAC TGGATTGAGG ATGTGA 996 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Catalytic step 2 spliceosome | |
Cellular Component | Nucleoplasm | |
Cellular Component | Post-mRNA release spliceosomal complex | |
Cellular Component | Post-spliceosomal complex | |
Cellular Component | Prp19 complex | |
Molecular Function | RNA binding | |
Biological Process | Generation of catalytic spliceosome for second transesterification step | |
Biological Process | MRNA 3'-splice site recognition | |
Biological Process | MRNA splicing, via spliceosome | |
Biological Process | Transcription-coupled nucleotide-excision repair |
▼ ANNOTATION
Variation | ||||
rSNPBase |
Disease | ||||
TumorFusions |
Drug | ||||
CTD |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Function | ||||
CORUM | CellMarker |
Localization | ||||
COMPARTMENTS |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Poa-2591 | Pongo abelii | 99.65 | 8e-164 | 466 |
LLPS-Mal-1500 | Mandrillus leucophaeus | 99.65 | 8e-164 | 466 |
LLPS-Maf-1096 | Macaca fascicularis | 99.65 | 8e-164 | 466 |
LLPS-Chs-2628 | Chlorocebus sabaeus | 99.65 | 8e-164 | 466 |
LLPS-Cea-2996 | Cercocebus atys | 99.65 | 8e-164 | 466 |
LLPS-Paa-0960 | Papio anubis | 99.3 | 8e-164 | 466 |
LLPS-Otg-3892 | Otolemur garnettii | 99.29 | 2e-162 | 462 |
LLPS-Cas-2585 | Carlito syrichta | 98.94 | 5e-163 | 464 |
LLPS-Caj-1016 | Callithrix jacchus | 98.94 | 1e-162 | 463 |
LLPS-Eqc-1192 | Equus caballus | 98.88 | 1e-151 | 436 |
LLPS-Pap-0057 | Pan paniscus | 98.85 | 4e-143 | 413 |
LLPS-Mam-1393 | Macaca mulatta | 98.79 | 0.0 | 558 |
LLPS-Cap-3796 | Cavia porcellus | 98.59 | 2e-163 | 464 |
LLPS-Aon-2979 | Aotus nancymaae | 98.41 | 3e-140 | 406 |
LLPS-Caf-2372 | Canis familiaris | 98.24 | 1e-161 | 460 |
LLPS-Orc-1657 | Oryctolagus cuniculus | 98.24 | 3e-163 | 464 |
LLPS-Mum-1088 | Mus musculus | 98.24 | 2e-163 | 464 |
LLPS-Fec-1265 | Felis catus | 98.18 | 2e-152 | 441 |
LLPS-Mea-0167 | Mesocricetus auratus | 97.54 | 5e-162 | 461 |
LLPS-Xet-0766 | Xenopus tropicalis | 96.92 | 9e-86 | 261 |
LLPS-Dio-0064 | Dipodomys ordii | 96.74 | 1e-154 | 442 |
LLPS-Ict-0443 | Ictidomys tridecemlineatus | 96.48 | 2e-161 | 460 |
LLPS-Aim-2294 | Ailuropoda melanoleuca | 95.45 | 0.0 | 532 |
LLPS-Ran-2520 | Rattus norvegicus | 93.66 | 2e-161 | 460 |
LLPS-Sus-1844 | Sus scrofa | 93.66 | 3e-161 | 459 |
LLPS-Myl-2792 | Myotis lucifugus | 92.93 | 2e-149 | 429 |
LLPS-Gog-0057 | Gorilla gorilla | 92.48 | 1e-157 | 451 |
LLPS-Nol-3251 | Nomascus leucogenys | 92.16 | 2e-157 | 450 |
LLPS-Pat-1892 | Pan troglodytes | 92.16 | 7e-157 | 449 |
LLPS-Bot-0395 | Bos taurus | 91.23 | 6e-161 | 458 |
LLPS-Fud-3852 | Fukomys damarensis | 90.97 | 5e-153 | 439 |
LLPS-Tag-0723 | Taeniopygia guttata | 90.0 | 3e-118 | 348 |
LLPS-Tut-1481 | Tursiops truncatus | 89.75 | 1e-154 | 442 |
LLPS-Mup-0473 | Mustela putorius furo | 88.38 | 3e-136 | 396 |
LLPS-Mod-2211 | Monodelphis domestica | 88.03 | 4e-153 | 439 |
LLPS-Sah-2267 | Sarcophilus harrisii | 88.03 | 4e-153 | 439 |
LLPS-Tar-0956 | Takifugu rubripes | 87.78 | 2e-112 | 331 |
LLPS-Ova-0765 | Ovis aries | 87.68 | 6e-157 | 449 |
LLPS-Loa-0536 | Loxodonta africana | 87.28 | 2e-130 | 380 |
LLPS-Pes-1540 | Pelodiscus sinensis | 85.96 | 1e-147 | 424 |
LLPS-Man-0518 | Macaca nemestrina | 85.67 | 3e-133 | 389 |
LLPS-Rhb-1286 | Rhinopithecus bieti | 85.56 | 2e-124 | 364 |
LLPS-Lac-1556 | Latimeria chalumnae | 85.26 | 4e-148 | 426 |
LLPS-Anc-1726 | Anolis carolinensis | 84.94 | 4e-131 | 382 |
LLPS-Fia-0300 | Ficedula albicollis | 84.91 | 9e-148 | 425 |
LLPS-Meg-1084 | Meleagris gallopavo | 83.45 | 1e-146 | 422 |
LLPS-Orn-1218 | Oreochromis niloticus | 83.42 | 5e-108 | 322 |
LLPS-Gaga-2359 | Gallus gallus | 83.16 | 7e-150 | 430 |
LLPS-Asm-0558 | Astyanax mexicanus | 82.46 | 1e-147 | 425 |
LLPS-Scf-0270 | Scleropages formosus | 82.17 | 8e-147 | 422 |
LLPS-Icp-0593 | Ictalurus punctatus | 81.4 | 9e-144 | 415 |
LLPS-Dar-0217 | Danio rerio | 80.7 | 5e-145 | 418 |
LLPS-Scm-1298 | Scophthalmus maximus | 76.49 | 3e-137 | 398 |
LLPS-Gaa-0973 | Gasterosteus aculeatus | 75.44 | 5e-135 | 392 |
LLPS-Xim-2330 | Xiphophorus maculatus | 74.9 | 2e-115 | 344 |
LLPS-Orl-3066 | Oryzias latipes | 74.65 | 6e-134 | 390 |
LLPS-Leo-0743 | Lepisosteus oculatus | 73.9 | 6e-137 | 399 |
LLPS-Anp-0319 | Anas platyrhynchos | 72.82 | 6e-119 | 351 |
LLPS-Ora-0210 | Ornithorhynchus anatinus | 71.29 | 1e-118 | 351 |
LLPS-Ten-0408 | Tetraodon nigroviridis | 69.55 | 2e-126 | 370 |
LLPS-Pof-0702 | Poecilia formosa | 65.56 | 2e-61 | 200 |
LLPS-Cii-1292 | Ciona intestinalis | 63.38 | 1e-109 | 327 |
LLPS-Vir-1166 | Vigna radiata | 62.18 | 7e-47 | 162 |
LLPS-Bro-1709 | Brassica oleracea | 60.99 | 8e-63 | 208 |
LLPS-Brr-1012 | Brassica rapa | 60.99 | 1e-62 | 207 |
LLPS-Brn-0694 | Brassica napus | 60.99 | 8e-63 | 207 |
LLPS-Cis-0624 | Ciona savignyi | 60.4 | 3e-110 | 330 |
LLPS-Drm-2252 | Drosophila melanogaster | 60.15 | 4e-101 | 305 |
LLPS-Mae-2010 | Manihot esculenta | 59.69 | 1e-63 | 210 |
LLPS-Mel-0315 | Melampsora laricipopulina | 58.57 | 1e-47 | 169 |
LLPS-Zem-0681 | Zea mays | 56.57 | 4e-61 | 204 |
LLPS-Sob-0557 | Sorghum bicolor | 56.57 | 2e-61 | 204 |
LLPS-Sei-1312 | Setaria italica | 56.57 | 2e-61 | 205 |
LLPS-Brd-2313 | Brachypodium distachyon | 56.57 | 1e-61 | 205 |
LLPS-Orbr-1697 | Oryza brachyantha | 56.06 | 5e-61 | 204 |
LLPS-Lep-0380 | Leersia perrieri | 56.06 | 6e-61 | 204 |
LLPS-Orr-0976 | Oryza rufipogon | 55.56 | 3e-60 | 202 |
LLPS-Org-1083 | Oryza glaberrima | 55.56 | 3e-60 | 202 |
LLPS-Ors-0356 | Oryza sativa | 55.56 | 3e-60 | 202 |
LLPS-Orp-0926 | Oryza punctata | 55.56 | 3e-60 | 202 |
LLPS-Orgl-1844 | Oryza glumaepatula | 55.56 | 3e-60 | 202 |
LLPS-Tra-0935 | Triticum aestivum | 55.56 | 1e-59 | 200 |
LLPS-Orb-0736 | Oryza barthii | 55.56 | 3e-60 | 202 |
LLPS-Ori-0674 | Oryza indica | 55.56 | 3e-60 | 202 |
LLPS-Orni-1462 | Oryza nivara | 55.56 | 3e-60 | 202 |
LLPS-Abg-1077 | Absidia glauca | 55.5 | 1e-64 | 210 |
LLPS-Hov-0966 | Hordeum vulgare | 54.55 | 3e-57 | 194 |
LLPS-Tru-0183 | Triticum urartu | 54.14 | 3e-42 | 153 |
LLPS-Map-1022 | Magnaporthe poae | 52.46 | 4e-09 | 59.3 |
LLPS-Put-0930 | Puccinia triticina | 51.91 | 3e-34 | 134 |
LLPS-Gas-1231 | Galdieria sulphuraria | 51.55 | 2e-56 | 191 |
LLPS-Usm-0555 | Ustilago maydis | 51.38 | 9e-45 | 162 |
LLPS-Pytr-0757 | Pyrenophora triticirepentis | 51.05 | 6e-53 | 181 |
LLPS-Cog-0369 | Colletotrichum gloeosporioides | 50.85 | 2e-49 | 171 |
LLPS-Gor-0906 | Gossypium raimondii | 50.84 | 3e-71 | 230 |
LLPS-Pyt-0695 | Pyrenophora teres | 50.53 | 1e-52 | 180 |
LLPS-Coc-0733 | Corchorus capsularis | 50.17 | 2e-69 | 225 |
LLPS-Nia-2076 | Nicotiana attenuata | 50.17 | 2e-70 | 228 |
LLPS-Phn-0961 | Phaeosphaeria nodorum | 50.0 | 8e-51 | 177 |
LLPS-Thc-2348 | Theobroma cacao | 49.83 | 6e-68 | 221 |
LLPS-Cogr-0541 | Colletotrichum graminicola | 49.46 | 5e-50 | 173 |
LLPS-Lem-0720 | Leptosphaeria maculans | 49.24 | 5e-53 | 181 |
LLPS-Scs-0739 | Sclerotinia sclerotiorum | 49.24 | 4e-54 | 184 |
LLPS-Sot-0934 | Solanum tuberosum | 48.99 | 1e-69 | 226 |
LLPS-Miv-1056 | Microbotryum violaceum | 48.94 | 2e-46 | 166 |
LLPS-Coo-1037 | Colletotrichum orbiculare | 48.86 | 1e-46 | 164 |
LLPS-Nec-1213 | Neurospora crassa | 48.69 | 3e-49 | 171 |
LLPS-Arl-0983 | Arabidopsis lyrata | 48.66 | 3e-72 | 233 |
LLPS-Spr-0328 | Sporisorium reilianum | 48.59 | 3e-42 | 155 |
LLPS-Sol-1509 | Solanum lycopersicum | 48.5 | 1e-69 | 226 |
LLPS-Phv-1245 | Phaseolus vulgaris | 48.49 | 3e-66 | 217 |
LLPS-Amt-1258 | Amborella trichopoda | 48.47 | 6e-70 | 226 |
LLPS-Beb-1356 | Beauveria bassiana | 48.44 | 2e-40 | 147 |
LLPS-Chr-0884 | Chlamydomonas reinhardtii | 48.44 | 2e-76 | 243 |
LLPS-Zyt-0567 | Zymoseptoria tritici | 48.4 | 1e-50 | 174 |
LLPS-Cus-0682 | Cucumis sativus | 48.34 | 7e-69 | 224 |
LLPS-Glm-0990 | Glycine max | 48.16 | 1e-71 | 231 |
LLPS-Mua-1128 | Musa acuminata | 48.14 | 2e-61 | 211 |
LLPS-Art-0745 | Arabidopsis thaliana | 47.99 | 1e-70 | 228 |
LLPS-Php-1154 | Physcomitrella patens | 47.77 | 5e-77 | 244 |
LLPS-Blg-0691 | Blumeria graminis | 47.47 | 4e-51 | 176 |
LLPS-Dos-0539 | Dothistroma septosporum | 47.34 | 7e-48 | 167 |
LLPS-Prp-1081 | Prunus persica | 47.33 | 1e-63 | 211 |
LLPS-Tum-1219 | Tuber melanosporum | 47.22 | 8e-49 | 169 |
LLPS-Viv-0604 | Vitis vinifera | 47.14 | 2e-66 | 217 |
LLPS-Hea-2365 | Helianthus annuus | 47.14 | 3e-65 | 214 |
LLPS-Cae-0996 | Caenorhabditis elegans | 47.04 | 6e-63 | 207 |
LLPS-Dac-1371 | Daucus carota | 46.94 | 1e-67 | 220 |
LLPS-Pot-0490 | Populus trichocarpa | 46.84 | 2e-64 | 213 |
LLPS-Mao-0735 | Magnaporthe oryzae | 46.77 | 2e-46 | 164 |
LLPS-Trv-0787 | Trichoderma virens | 45.86 | 1e-40 | 148 |
LLPS-Met-1080 | Medicago truncatula | 45.85 | 1e-64 | 213 |
LLPS-Fuo-0139 | Fusarium oxysporum | 45.64 | 8e-48 | 167 |
LLPS-Fuv-0381 | Fusarium verticillioides | 45.64 | 2e-47 | 166 |
LLPS-Crn-0296 | Cryptococcus neoformans | 45.36 | 1e-43 | 159 |
LLPS-Ved-1043 | Verticillium dahliae | 45.0 | 3e-45 | 160 |
LLPS-Fus-0433 | Fusarium solani | 44.16 | 7e-41 | 149 |
LLPS-Ast-1437 | Aspergillus terreus | 43.88 | 5e-44 | 157 |
LLPS-Trr-0823 | Trichoderma reesei | 43.37 | 1e-40 | 148 |
LLPS-Nef-1599 | Neosartorya fischeri | 43.15 | 3e-42 | 153 |
LLPS-Scj-0947 | Schizosaccharomyces japonicus | 42.86 | 2e-34 | 131 |
LLPS-Gag-0122 | Gaeumannomyces graminis | 42.86 | 2e-36 | 137 |
LLPS-Asn-0535 | Aspergillus nidulans | 42.51 | 2e-40 | 148 |
LLPS-Asni-0885 | Aspergillus niger | 42.42 | 3e-42 | 153 |
LLPS-Aso-0971 | Aspergillus oryzae | 41.95 | 3e-42 | 153 |
LLPS-Asf-1055 | Aspergillus flavus | 41.95 | 3e-42 | 153 |
LLPS-Asc-0496 | Aspergillus clavatus | 41.94 | 5e-37 | 139 |
LLPS-Sem-1744 | Selaginella moellendorffii | 41.81 | 4e-62 | 206 |
LLPS-Asfu-0377 | Aspergillus fumigatus | 41.71 | 9e-37 | 138 |
LLPS-Scp-1339 | Schizosaccharomyces pombe | 41.26 | 2e-29 | 117 |
LLPS-Osl-0782 | Ostreococcus lucimarinus | 40.55 | 1e-59 | 199 |
LLPS-Kop-1095 | Komagataella pastoris | 40.15 | 3e-25 | 107 |
LLPS-Via-0766 | Vigna angularis | 39.63 | 5e-41 | 150 |
LLPS-Yal-0685 | Yarrowia lipolytica | 37.76 | 2e-35 | 134 |
LLPS-Scc-1023 | Schizosaccharomyces cryophilus | 36.69 | 4e-28 | 114 |
LLPS-Asg-0208 | Ashbya gossypii | 34.56 | 6e-18 | 85.5 |
LLPS-Sac-1156 | Saccharomyces cerevisiae | 33.33 | 1e-13 | 72.8 |