LLPS-Hos-2366
MAP6
▼ OVERVIEW
Status: | Reviewed |
Protein Name: | Microtubule-associated protein 6 |
Gene Name: | MAP6, KIAA1878 |
Ensembl Gene: | ENSG00000171533.11 |
Ensembl Protein: | ENSP00000434278.1 |
Organism: | Homo sapiens |
Taxa ID: | 9606 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Description | Tissue/Cell | PMIDs |
---|---|---|---|
Centrosome/Spindle pole body | "...MiCroKiTS 4.0: a database of midbody, centrosome, kinetochore, telomere and spindle." | N/A | 2249667, 16837464 |
Postsynaptic density | "...We report the first direct comparison of the proteome of triplicate isolates of mouse and human cortical postsynaptic densities. The mouse postsynaptic density comprised 1556 proteins and the human one 1461." | Human cortex | 23071613 |
▼ FUNCTION
Involved in microtubule stabilization in many cell types, including neuronal cells (By similarity). Specifically has microtubule cold stabilizing activity (By similarity). Involved in dendrite morphogenesis and maintenance by regulating lysosomal trafficking via its interaction with TMEM106B (PubMed:24357581). Regulates KIF5A-mediated axonal cargo transport (By similarity). Regulates axonal growth during neuron polarization (By similarity). |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENST00000526740.3 | ENSP00000434278.1 |
Ensembl | ENST00000304771.7 | ENSP00000307093.3 |
Ensembl | ENST00000434603.2 | ENSP00000415108.2 |
UniProt | Q96JE9, MAP6_HUMAN, A7E2A1, Q6P3T0, Q6ZWB8 | |
GeneBank | AP001922, AB058781, BC063860, AK123340, BC150254, BC139780 | AAI50255.1, BAB47507.1, AAH63860.1, AAI39781.1, BAC85586.1 |
RefSeq | NM_033063.1, NM_207577.1 | NP_149052.1, NP_997460.1 |
Entrez | 4135 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAWPCITRAC CIARFWNQLD KADIAVPLVF TKYSEATEHP GAPPQPPPPQ QQAQPALAPP 60 61 SARAVAIETQ PAQGELDAVA RATGPAPGPT GEREPAAGPG RSGPGPGLGS GSTSGPADSV 120 121 MRQDYRAWKV QRPEPSCRPR SEYQPSDAPF ERETQYQKDF RAWPLPRRGD HPWIPKPVQI 180 181 SAASQASAPI LGAPKRRPQS QERWPVQAAA EAREQEAAPG GAGGLAAGKA SGADERDTRR 240 241 KAGPAWIVRR AEGLGHEQTP LPAAQAQVQA TGPEAGRGRA AADALNRQIR EEVASAVSSS 300 301 YRNEFRAWTD IKPVKPIKAK PQYKPPDDKM VHETSYSAQF KGEASKPTTA DNKVIDRRRI 360 361 RSLYSEPFKE PPKVEKPSVQ SSKPKKTSAS HKPTRKAKDK QAVSGQAAKK KSAEGPSTTK 420 421 PDDKEQSKEM NNKLAEAKES LAQPVSDSSK TQGPVATEPD KDQGSVVPGL LKGQGPMVQE 480 481 PLKKQGSVVP GPPKDLGPMI PLPVKDQDHT VPEPLKNESP VISAPVKDQG PSVPVPPKNQ 540 541 SPMVPAKVKD QGSVVPESLK DQGPRIPEPV KNQAPMVPAP VKDEGPMVSA SVKDQGPMVS 600 601 APVKDQGPIV PAPVKGEGPI VPAPVKDEGP MVSAPIKDQD PMVPEHPKDE SAMATAPIKN 660 661 QGSMVSEPVK NQGLVVSGPV KDQDVVVPEH AKVHDSAVVA PVKNQGPVVP ESVKNQDPIL 720 721 PVLVKDQGPT VLQPPKNQGR IVPEPLKNQV PIVPVPLKDQ DPLVPVPAKD QGPAVPEPLK 780 781 TQGPRDPQLP TVSPLPRVMI PTAPHTEYIE SSP 813 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCGTGGC CGTGCATCAC GAGGGCCTGC TGCATCGCCC GCTTCTGGAA CCAGTTGGAC 60 61 AAAGCGGACA TCGCTGTGCC GCTGGTTTTC ACCAAGTACT CGGAGGCCAC CGAGCACCCG 120 121 GGCGCCCCGC CGCAGCCACC GCCGCCGCAG CAGCAGGCGC AGCCGGCGCT CGCGCCCCCC 180 181 TCGGCGCGCG CGGTTGCCAT AGAGACGCAG CCAGCCCAGG GCGAGTTGGA TGCAGTTGCC 240 241 CGGGCAACGG GGCCAGCGCC TGGGCCTACC GGCGAGCGCG AGCCGGCGGC GGGCCCCGGC 300 301 CGGAGCGGGC CGGGCCCGGG CCTGGGCTCC GGCTCCACCT CCGGCCCCGC GGACTCGGTG 360 361 ATGCGGCAGG ATTACCGAGC CTGGAAGGTG CAGCGGCCCG AGCCCAGCTG CCGGCCGCGC 420 421 AGCGAATACC AGCCCTCCGA CGCTCCCTTC GAGCGCGAGA CCCAGTACCA GAAGGACTTC 480 481 CGCGCCTGGC CGCTGCCGCG CCGCGGGGAC CACCCGTGGA TCCCCAAGCC CGTGCAGATC 540 541 TCTGCGGCCT CCCAGGCGTC GGCGCCCATT CTCGGGGCGC CCAAGCGCCG GCCGCAGAGC 600 601 CAGGAGCGCT GGCCAGTGCA GGCCGCCGCT GAGGCCCGGG AGCAGGAGGC GGCCCCCGGC 660 661 GGAGCGGGTG GCCTGGCGGC CGGAAAGGCG TCCGGGGCGG ACGAGCGCGA CACGCGCAGG 720 721 AAGGCCGGGC CTGCCTGGAT TGTGCGCCGC GCCGAGGGCC TGGGGCACGA GCAGACGCCG 780 781 CTGCCCGCGG CCCAGGCCCA GGTCCAGGCC ACCGGCCCCG AGGCTGGCAG GGGGCGCGCC 840 841 GCGGCGGACG CCCTCAACCG GCAAATCCGC GAGGAGGTGG CGAGTGCAGT GAGCAGCTCC 900 901 TACAGGAATG AATTCAGGGC ATGGACGGAC ATCAAGCCTG TGAAACCAAT AAAGGCCAAG 960 961 CCCCAGTACA AGCCCCCAGA TGATAAGATG GTTCATGAGA CCAGCTACAG TGCTCAGTTC 1020 1021 AAAGGAGAGG CCAGCAAGCC AACAACAGCT GACAATAAGG TCATTGATCG CAGAAGAATA 1080 1081 CGCAGCCTCT ACAGCGAACC CTTCAAGGAA CCCCCAAAGG TGGAAAAACC TAGTGTTCAG 1140 1141 AGTTCCAAAC CAAAAAAGAC CTCAGCGAGC CATAAGCCCA CGAGGAAGGC CAAAGACAAG 1200 1201 CAGGCGGTGT CAGGCCAGGC TGCCAAGAAA AAGAGCGCGG AGGGCCCGAG TACCACCAAG 1260 1261 CCAGACGACA AGGAGCAAAG CAAAGAGATG AACAATAAAC TGGCTGAGGC GAAAGAGAGC 1320 1321 CTGGCTCAAC CCGTCAGTGA TTCAAGTAAG ACTCAAGGTC CTGTAGCCAC AGAGCCAGAC 1380 1381 AAGGATCAAG GTTCTGTGGT CCCAGGCCTT CTGAAAGGTC AAGGTCCTAT GGTGCAAGAG 1440 1441 CCTCTGAAGA AGCAAGGTTC TGTGGTCCCA GGGCCTCCAA AGGATCTAGG TCCCATGATC 1500 1501 CCATTACCAG TCAAGGATCA AGATCACACG GTCCCTGAGC CTTTAAAGAA TGAAAGCCCT 1560 1561 GTTATCTCAG CACCAGTCAA GGACCAAGGT CCCTCGGTCC CAGTTCCTCC AAAGAATCAA 1620 1621 AGTCCTATGG TTCCAGCAAA AGTTAAGGAT CAAGGCTCTG TGGTACCAGA GTCTCTAAAG 1680 1681 GATCAAGGTC CTAGGATTCC TGAGCCTGTG AAGAATCAAG CTCCTATGGT CCCAGCACCT 1740 1741 GTCAAGGATG AAGGTCCCAT GGTCTCAGCA TCTGTCAAGG ATCAAGGTCC CATGGTCTCA 1800 1801 GCACCTGTCA AGGATCAAGG TCCCATAGTC CCAGCACCTG TCAAGGGTGA AGGTCCCATA 1860 1861 GTCCCAGCAC CTGTCAAGGA TGAAGGTCCC ATGGTCTCAG CACCTATCAA GGATCAAGAT 1920 1921 CCCATGGTCC CAGAGCATCC GAAGGATGAA AGTGCCATGG CCACAGCACC CATAAAGAAT 1980 1981 CAAGGTTCCA TGGTCTCTGA GCCTGTAAAG AATCAAGGTT TAGTGGTCTC AGGGCCAGTC 2040 2041 AAGGATCAAG ATGTTGTAGT CCCAGAGCAT GCAAAGGTTC ACGATTCTGC AGTTGTGGCA 2100 2101 CCTGTAAAGA ATCAAGGTCC TGTGGTCCCC GAGTCCGTGA AGAATCAAGA CCCCATTCTC 2160 2161 CCAGTACTAG TTAAGGATCA AGGCCCCACA GTCCTACAGC CTCCAAAGAA TCAAGGTCGT 2220 2221 ATAGTCCCTG AACCTCTGAA GAATCAAGTT CCTATAGTCC CAGTGCCTCT GAAGGATCAA 2280 2281 GATCCTCTGG TGCCAGTACC AGCAAAGGAC CAAGGTCCTG CAGTCCCTGA ACCTCTGAAG 2340 2341 ACTCAAGGTC CCAGGGACCC TCAGCTACCT ACTGTCTCAC CTCTACCCCG AGTCATGATC 2400 2401 CCAACTGCCC CCCATACGGA ATACATTGAG AGCTCCCCTT GA 2442 |
▼ KEYWORD
ID | Family |
Alternative splicing | |
Calmodulin-binding | |
Cell projection | |
Complete proteome | |
Cytoplasm | |
Cytoplasmic vesicle | |
Cytoskeleton | |
Golgi apparatus | |
Lipoprotein | |
Membrane | |
Microtubule | |
Palmitate | |
Phosphoprotein | |
Polymorphism | |
Reference proteome | |
Transport
|
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Axon | |
Cellular Component | Cis-Golgi network | |
Cellular Component | Dendrite | |
Cellular Component | Golgi-associated vesicle | |
Cellular Component | Microtubule | |
Cellular Component | Perinuclear region of cytoplasm | |
Cellular Component | Transport vesicle membrane | |
Molecular Function | Calmodulin binding | |
Molecular Function | Microtubule binding | |
Biological Process | Cytoskeleton-dependent intracellular transport | |
Biological Process | Dendrite morphogenesis | |
Biological Process | Lysosome localization | |
Biological Process | Microtubule cytoskeleton organization | |
Biological Process | Positive regulation of axonogenesis | |
Biological Process | Regulation of microtubule cytoskeleton organization |
▼ ANNOTATION
Drug | ||||
CTD |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Function | ||||
CellMarker |
Localization | ||||
COMPARTMENTS |
Methylation | ||||
TCGA | ICGC | COSMIC | MethyCancer |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Pat-3740 | Pan troglodytes | 97.91 | 0.0 | 1355 |
LLPS-Gog-3214 | Gorilla gorilla | 97.67 | 0.0 | 1347 |
LLPS-Nol-2917 | Nomascus leucogenys | 97.05 | 0.0 | 1348 |
LLPS-Cea-0352 | Cercocebus atys | 96.36 | 0.0 | 659 |
LLPS-Pap-0286 | Pan paniscus | 95.24 | 0.0 | 625 |
LLPS-Chs-4075 | Chlorocebus sabaeus | 93.49 | 0.0 | 1296 |
LLPS-Maf-4550 | Macaca fascicularis | 92.63 | 0.0 | 1286 |
LLPS-Mam-4181 | Macaca mulatta | 91.12 | 0.0 | 812 |
LLPS-Man-3291 | Macaca nemestrina | 91.03 | 0.0 | 1254 |
LLPS-Caj-3155 | Callithrix jacchus | 89.94 | 0.0 | 1251 |
LLPS-Ict-4395 | Ictidomys tridecemlineatus | 87.38 | 4e-98 | 321 |
LLPS-Aon-3807 | Aotus nancymaae | 87.02 | 0.0 | 705 |
LLPS-Eqc-0510 | Equus caballus | 86.43 | 3e-100 | 342 |
LLPS-Cap-2399 | Cavia porcellus | 85.92 | 9e-92 | 305 |
LLPS-Paa-4809 | Papio anubis | 85.5 | 0.0 | 1142 |
LLPS-Asm-2136 | Astyanax mexicanus | 84.21 | 5e-15 | 82.8 |
LLPS-Ova-1859 | Ovis aries | 82.28 | 3e-90 | 311 |
LLPS-Caf-1738 | Canis familiaris | 81.06 | 3e-100 | 338 |
LLPS-Dio-3268 | Dipodomys ordii | 80.12 | 4e-64 | 226 |
LLPS-Loa-2752 | Loxodonta africana | 79.12 | 2e-111 | 369 |
LLPS-Lac-2813 | Latimeria chalumnae | 76.79 | 8e-23 | 104 |
LLPS-Rhb-0219 | Rhinopithecus bieti | 75.28 | 0.0 | 961 |
LLPS-Bot-2736 | Bos taurus | 74.49 | 3e-86 | 303 |
LLPS-Mum-4169 | Mus musculus | 73.83 | 2e-98 | 333 |
LLPS-Tut-0494 | Tursiops truncatus | 73.55 | 0.0 | 949 |
LLPS-Ran-2459 | Rattus norvegicus | 73.49 | 1e-97 | 332 |
LLPS-Fec-0873 | Felis catus | 72.76 | 0.0 | 904 |
LLPS-Otg-2996 | Otolemur garnettii | 71.48 | 0.0 | 910 |
LLPS-Myl-4349 | Myotis lucifugus | 70.55 | 3e-40 | 164 |
LLPS-Orc-3683 | Oryctolagus cuniculus | 69.1 | 1e-96 | 328 |
LLPS-Ora-0554 | Ornithorhynchus anatinus | 68.99 | 1e-29 | 121 |
LLPS-Mup-2021 | Mustela putorius furo | 68.16 | 0.0 | 845 |
LLPS-Cas-3683 | Carlito syrichta | 65.67 | 0.0 | 598 |
LLPS-Leo-2737 | Lepisosteus oculatus | 64.02 | 5e-50 | 187 |
LLPS-Anc-3305 | Anolis carolinensis | 62.22 | 5e-51 | 189 |
LLPS-Sus-0291 | Sus scrofa | 61.71 | 0.0 | 773 |
LLPS-Fud-1732 | Fukomys damarensis | 61.38 | 0.0 | 561 |
LLPS-Fia-0783 | Ficedula albicollis | 59.41 | 6e-84 | 275 |
LLPS-Mea-2480 | Mesocricetus auratus | 59.38 | 0.0 | 788 |
LLPS-Gaga-1206 | Gallus gallus | 59.26 | 8e-93 | 302 |
LLPS-Anp-2265 | Anas platyrhynchos | 54.73 | 1e-118 | 371 |
LLPS-Pes-3419 | Pelodiscus sinensis | 54.44 | 8e-119 | 372 |
LLPS-Tar-3587 | Takifugu rubripes | 53.85 | 8e-32 | 132 |
LLPS-Dar-0978 | Danio rerio | 51.87 | 5e-36 | 146 |
LLPS-Xet-1741 | Xenopus tropicalis | 50.34 | 6e-109 | 346 |
LLPS-Ten-3804 | Tetraodon nigroviridis | 47.73 | 5e-38 | 151 |
LLPS-Icp-0175 | Ictalurus punctatus | 46.89 | 7e-36 | 144 |
LLPS-Orn-0664 | Oreochromis niloticus | 45.33 | 7e-81 | 271 |
LLPS-Scf-1432 | Scleropages formosus | 44.47 | 2e-93 | 305 |
LLPS-Pof-0655 | Poecilia formosa | 42.67 | 2e-81 | 275 |
LLPS-Orl-0414 | Oryzias latipes | 42.24 | 1e-80 | 273 |
LLPS-Gaa-1208 | Gasterosteus aculeatus | 41.83 | 4e-21 | 102 |
LLPS-Scm-0355 | Scophthalmus maximus | 41.59 | 4e-74 | 255 |
LLPS-Xim-1917 | Xiphophorus maculatus | 41.16 | 2e-76 | 261 |