LLPS-Hos-2107
ZCCHC2
▼ OVERVIEW
Status: | Reviewed |
Protein Name: | Zinc finger CCHC domain-containing protein 2 |
Gene Name: | ZCCHC2, C18orf49, KIAA1744 |
Ensembl Gene: | ENSG00000141664.9 |
Ensembl Protein: | ENSP00000468368.1 |
Organism: | Homo sapiens |
Taxa ID: | 9606 |
LLPS Type: | Client |
▼ Classification
Condensates:
Condensate | Description | Tissue/Cell | PMIDs |
---|---|---|---|
P-body | "...Analysis of correlated patterns between endogenous preys uncovers the spatial organization of RNA regulatory structures and enables the definition of 144 core components of SGs and PBs." | N/A | 29395067 |
Stress granule | "...Analysis of correlated patterns between endogenous preys uncovers the spatial organization of RNA regulatory structures and enables the definition of 144 core components of SGs and PBs." | N/A | 29395067 |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENST00000591145.1 | ENSP00000468368.1 |
Ensembl | ENST00000586834.1 | ENSP00000464791.1 |
Ensembl | ENST00000621048.4 | ENSP00000480901.1 |
Ensembl | ENST00000588676.1 | ENSP00000465548.1 |
Ensembl | ENST00000269499.9 | ENSP00000269499.4 |
Ensembl | ENST00000585873.5 | ENSP00000468789.1 |
UniProt | Q9C0B9, ZCHC2_HUMAN, B2RPG6, Q8N3S1, Q9NXF6 | |
GeneBank | AC064801, AK000288, AB051531, BC137435, AL832323 | , AAI37436.1, BAA91057.1, CAD38618.1, BAB21835.1 |
RefSeq | NM_017742.5 | NP_060212.4 |
Entrez | 54877 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MLRMKLPLKP THPAEPPPEA EEPEADARPG AKAPSRRRRD CRPPPPPPPP AGPSRGPLPP 60 61 PPPPRGLGPP VAGGAAAGAG MPGGGGGPSA ALREQERVYE WFGLVLGSAQ RLEFMCGLLD 120 121 LCNPLELRFL GSCLEDLARK DYHYLRDSEA KANGLSDPGP LADFREPAVR SRLIVYLALL 180 181 GSENREAAGR LHRLLPQVDS VLKSLRAARG EGSRGGAEDE RGEDGDGEQD AEKDGSGPEG 240 241 GIVEPRVGGG LGSRAQEELL LLFTMASLHP AFSFHQRVTL REHLERLRAA LRGGPEDAEV 300 301 EVEPCKFAGP RAQNNSAHGD YMQNNESSLI EQAPIPQDGL TVAPHRAQRE AVHIEKIMLK 360 361 GVQRKRADKY WEYTFKVNWS DLSVTTVTKT HQELQEFLLK LPKELSSETF DKTILRALNQ 420 421 GSLKREERRH PDLEPILRQL FSSSSQAFLQ SQKVHSFFQS ISSDSLHSIN NLQSSLKTSK 480 481 ILEHLKEDSS EASSQEEDVL QHAIIHKKHT GKSPIVNNIG TSCSPLDGLT MQYSEQNGIV 540 541 DWRKQSCTTI QHPEHCVTSA DQHSAEKRSL SSINKKKGKP QTEKEKIKKT DNRLNSRING 600 601 IRLSTPQHAH GGTVKDVNLD IGSGHDTCGE TSSESYSSPS SPRHDGRESF ESEEEKDRDT 660 661 DSNSEDSGNP STTRFTGYGS VNQTVTVKPP VQIASLGNEN GNLLEDPLNS PKYQHISFMP 720 721 TLHCVMHNGA QKSEVVVPAP KPADGKTIGM LVPSPVAISA IRESANSTPV GILGPTACTG 780 781 ESEKHLELLA SPLPIPSTFL PHSSTPALHL TVQRLKLPPP QGSSESCTVN IPQQPPGSLS 840 841 IASPNTAFIP IHNPGSFPGS PVATTDPITK SASQVVGLNQ MVPQIEGNTG TVPQPTNVKV 900 901 VLPAAGLSAA QPPASYPLPG SPLAAGVLPS QNSSVLSTAA TSPQPASAGI SQAQATVPPA 960 961 VPTHTPGPAP SPSPALTHST AQSDSTSYIS AVGNTNANGT VVPPQQMGSG PCGSCGRRCS 1020 1021 CGTNGNLQLN SYYYPNPMPG PMYRVPSFFT LPSICNGSYL NQAHQSNGNQ LPFFLPQTPY 1080 1081 ANGLVHDPVM GSQANYGMQQ MAGFGRFYPV YPAPNVVANT SGSGPKKNGN VSCYNCGVSG 1140 1141 HYAQDCKQSS MEANQQGTYR LRYAPPLPPS NDTLDSAD 1178 |
Nucleotide CDS Sequence (FASTA) |
1 ATGCTGAGGA TGAAGCTGCC GCTGAAGCCA ACGCACCCCG CGGAGCCGCC GCCCGAGGCG 60 61 GAGGAGCCCG AGGCGGACGC GCGGCCGGGC GCGAAGGCGC CTTCGCGCCG CCGCCGCGAC 120 121 TGCCGCCCCC CGCCGCCGCC GCCGCCGCCC GCGGGCCCGT CGCGGGGCCC TCTGCCGCCG 180 181 CCGCCGCCGC CCCGGGGACT CGGGCCGCCT GTTGCTGGTG GAGCGGCGGC GGGGGCGGGT 240 241 ATGCCGGGCG GCGGCGGGGG GCCCTCGGCG GCGCTGCGCG AGCAGGAGCG GGTATACGAG 300 301 TGGTTCGGGC TGGTGCTGGG CTCGGCGCAG CGCCTGGAGT TCATGTGCGG GCTGCTGGAC 360 361 CTGTGCAACC CGCTGGAGCT GCGCTTCCTT GGCTCGTGCC TGGAGGACCT GGCGCGCAAG 420 421 GACTACCACT ACCTGCGCGA CTCGGAGGCC AAGGCCAACG GCCTCTCGGA CCCGGGGCCG 480 481 CTGGCCGACT TCCGAGAGCC CGCGGTGCGC TCGCGCCTCA TCGTCTACCT GGCGCTGCTG 540 541 GGCTCGGAGA ACCGGGAGGC CGCTGGCCGT CTGCACCGCC TGCTACCCCA GGTGGACTCG 600 601 GTGCTCAAAA GCCTGCGCGC GGCCCGGGGC GAGGGCTCGC GGGGCGGCGC GGAGGACGAG 660 661 CGCGGCGAGG ACGGCGACGG CGAGCAGGAC GCCGAGAAGG ACGGCTCAGG CCCGGAAGGC 720 721 GGCATTGTGG AGCCCCGGGT CGGCGGCGGG CTTGGCTCCA GGGCCCAGGA GGAACTGCTG 780 781 CTGCTCTTCA CCATGGCCTC GCTGCACCCG GCTTTCTCCT TCCACCAGCG GGTCACCCTG 840 841 AGGGAACACT TGGAGAGGCT CCGCGCCGCG CTCCGCGGGG GCCCCGAGGA CGCGGAGGTG 900 901 GAGGTAGAGC CGTGCAAGTT TGCCGGCCCC AGGGCCCAGA ACAACTCTGC TCATGGTGAT 960 961 TACATGCAAA ATAACGAGAG CAGCTTAATA GAGCAAGCTC CAATACCTCA GGACGGACTT 1020 1021 ACCGTGGCAC CTCACAGAGC TCAGCGAGAA GCTGTACACA TTGAGAAGAT AATGTTGAAA 1080 1081 GGAGTCCAGA GAAAAAGAGC TGACAAATAC TGGGAGTACA CTTTCAAAGT AAATTGGTCT 1140 1141 GATCTTTCAG TCACAACAGT AACAAAAACC CACCAAGAAC TACAGGAATT TCTACTGAAG 1200 1201 CTTCCAAAGG AACTGTCTTC AGAGACTTTT GACAAGACCA TCTTAAGAGC CCTGAATCAG 1260 1261 GGTTCCTTGA AAAGGGAGGA ACGGCGACAT CCTGACCTAG AGCCCATCCT AAGGCAGCTA 1320 1321 TTTTCAAGTT CATCACAAGC TTTTCTACAA AGTCAGAAAG TACACAGCTT CTTTCAGTCC 1380 1381 ATATCATCAG ACTCCCTACA CAGTATCAAT AACTTACAAT CCTCTCTGAA GACTTCTAAG 1440 1441 ATATTAGAAC ACTTAAAAGA AGACAGCTCT GAAGCTTCAA GTCAAGAAGA AGATGTGTTG 1500 1501 CAGCATGCCA TAATCCACAA GAAGCATACT GGGAAAAGTC CCATTGTGAA CAATATTGGT 1560 1561 ACAAGTTGTT CTCCATTGGA TGGGCTTACC ATGCAATATT CTGAACAGAA TGGAATTGTG 1620 1621 GATTGGAGGA AGCAAAGCTG TACCACCATT CAACACCCAG AGCACTGTGT GACCTCGGCT 1680 1681 GACCAGCATT CTGCTGAAAA ACGGAGTTTA TCTTCAATAA ATAAGAAGAA AGGAAAGCCA 1740 1741 CAAACAGAAA AGGAGAAAAT TAAGAAAACT GACAACAGAT TGAATAGTAG AATAAATGGT 1800 1801 ATTAGACTCT CCACTCCTCA GCATGCCCAT GGTGGTACTG TGAAAGATGT GAATTTGGAC 1860 1861 ATTGGCTCTG GACATGACAC ATGTGGAGAA ACATCTTCAG AGAGTTACAG TTCTCCATCT 1920 1921 AGTCCCCGAC ATGATGGAAG AGAAAGTTTT GAAAGTGAAG AAGAGAAAGA CAGAGACACA 1980 1981 GACAGCAATT CTGAGGATTC TGGGAATCCA TCAACAACTA GGTTTACAGG TTACGGTTCT 2040 2041 GTCAACCAGA CTGTCACTGT CAAGCCACCT GTTCAAATTG CTTCACTAGG AAATGAGAAT 2100 2101 GGAAACCTTT TAGAAGATCC CTTAAACTCA CCCAAGTATC AGCATATTTC TTTTATGCCA 2160 2161 ACGTTACACT GTGTCATGCA CAATGGTGCC CAGAAGTCTG AAGTTGTCGT TCCTGCACCC 2220 2221 AAACCCGCTG ATGGCAAAAC CATAGGGATG CTTGTTCCTA GTCCTGTTGC TATTTCTGCA 2280 2281 ATAAGGGAGT CTGCAAATTC AACCCCTGTT GGAATACTAG GGCCAACAGC TTGCACTGGA 2340 2341 GAATCGGAAA AGCACCTTGA GTTACTGGCT TCCCCTTTAC CTATTCCATC AACCTTCCTT 2400 2401 CCACACAGTA GTACTCCCGC TTTGCATCTT ACAGTTCAGA GGCTAAAGTT GCCACCACCA 2460 2461 CAGGGATCTT CTGAGAGCTG CACAGTTAAC ATCCCACAAC AACCACCCGG AAGCCTGAGC 2520 2521 ATCGCATCAC CAAACACTGC CTTTATTCCT ATCCATAACC CAGGTAGTTT CCCAGGCTCT 2580 2581 CCTGTTGCTA CCACGGACCC CATCACAAAA TCTGCATCCC AAGTGGTAGG ACTCAATCAA 2640 2641 ATGGTGCCTC AAATTGAGGG AAACACAGGG ACAGTCCCTC AGCCTACCAA TGTGAAGGTA 2700 2701 GTTCTTCCAG CAGCTGGCCT CTCAGCTGCT CAGCCACCAG CTTCCTACCC CTTACCAGGC 2760 2761 TCTCCCCTTG CTGCCGGCGT GTTACCCAGC CAGAACTCCA GTGTGCTCAG CACAGCAGCA 2820 2821 ACTTCTCCCC AGCCAGCGAG CGCAGGTATC AGCCAGGCCC AGGCAACTGT TCCTCCTGCA 2880 2881 GTTCCTACCC ACACCCCAGG CCCTGCCCCG AGCCCAAGCC CTGCCTTGAC ACACAGTACC 2940 2941 GCGCAGAGTG ACAGCACCTC TTACATCAGT GCTGTGGGGA ACACGAACGC TAATGGGACA 3000 3001 GTAGTGCCAC CGCAGCAGAT GGGCTCAGGT CCTTGTGGTT CTTGTGGGCG AAGGTGCAGC 3060 3061 TGTGGGACCA ATGGAAACCT TCAGCTAAAT AGTTACTATT ATCCTAATCC AATGCCTGGA 3120 3121 CCAATGTACC GAGTCCCTTC ATTCTTTACT CTGCCATCCA TTTGCAATGG CAGCTACCTC 3180 3181 AACCAAGCAC ATCAGAGCAA TGGAAACCAA CTTCCTTTTT TTCTGCCTCA GACTCCATAT 3240 3241 GCAAATGGAC TGGTACATGA CCCAGTCATG GGGAGCCAAG CCAACTATGG CATGCAGCAG 3300 3301 ATGGCAGGAT TTGGGAGATT CTATCCTGTA TATCCAGCAC CTAACGTAGT TGCCAACACC 3360 3361 AGTGGTTCGG GGCCCAAGAA GAATGGGAAT GTCTCATGTT ACAATTGTGG TGTAAGCGGA 3420 3421 CACTATGCAC AGGACTGTAA GCAGTCGTCC ATGGAGGCCA ATCAACAAGG CACTTACAGA 3480 3481 CTGAGATACG CACCTCCCCT CCCCCCTTCT AATGATACGT TGGATTCTGC AGACTGA 3537 |
▼ ANNOTATION
Disease | ||||
DisGeNET | GWASdb | ActiveDriverDB |
Drug | ||||
CTD |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Function | ||||
ENPD | CellMarker |
Localization | ||||
COMPARTMENTS |
Methylation | ||||
TCGA | ICGC | MethyCancer |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Pat-4178 | Pan troglodytes | 99.91 | 0.0 | 1855 |
LLPS-Pap-2748 | Pan paniscus | 99.54 | 0.0 | 1847 |
LLPS-Nol-0505 | Nomascus leucogenys | 99.42 | 0.0 | 1477 |
LLPS-Cea-1881 | Cercocebus atys | 98.62 | 0.0 | 1831 |
LLPS-Man-2030 | Macaca nemestrina | 98.53 | 0.0 | 1828 |
LLPS-Mal-2291 | Mandrillus leucophaeus | 98.48 | 0.0 | 1461 |
LLPS-Rhb-1924 | Rhinopithecus bieti | 98.43 | 0.0 | 1822 |
LLPS-Maf-3635 | Macaca fascicularis | 98.41 | 0.0 | 1657 |
LLPS-Gog-3031 | Gorilla gorilla | 98.26 | 0.0 | 1843 |
LLPS-Chs-0916 | Chlorocebus sabaeus | 98.21 | 0.0 | 1780 |
LLPS-Poa-2634 | Pongo abelii | 98.08 | 0.0 | 1506 |
LLPS-Caj-1657 | Callithrix jacchus | 97.97 | 0.0 | 1819 |
LLPS-Paa-2657 | Papio anubis | 97.88 | 0.0 | 1842 |
LLPS-Aon-2763 | Aotus nancymaae | 97.51 | 0.0 | 1808 |
LLPS-Mam-2575 | Macaca mulatta | 97.51 | 0.0 | 1712 |
LLPS-Otg-0128 | Otolemur garnettii | 95.92 | 0.0 | 1426 |
LLPS-Ict-0789 | Ictidomys tridecemlineatus | 94.56 | 0.0 | 1497 |
LLPS-Cas-3039 | Carlito syrichta | 94.05 | 0.0 | 1398 |
LLPS-Fud-2745 | Fukomys damarensis | 93.52 | 0.0 | 1395 |
LLPS-Cap-1825 | Cavia porcellus | 93.31 | 0.0 | 1402 |
LLPS-Eqc-3700 | Equus caballus | 93.19 | 0.0 | 1731 |
LLPS-Sus-1723 | Sus scrofa | 92.26 | 0.0 | 1717 |
LLPS-Aim-2950 | Ailuropoda melanoleuca | 91.98 | 0.0 | 1730 |
LLPS-Fec-3315 | Felis catus | 90.53 | 0.0 | 1709 |
LLPS-Dio-2877 | Dipodomys ordii | 90.41 | 0.0 | 1658 |
LLPS-Orc-3284 | Oryctolagus cuniculus | 89.73 | 0.0 | 1327 |
LLPS-Myl-3889 | Myotis lucifugus | 88.67 | 0.0 | 1331 |
LLPS-Loa-3475 | Loxodonta africana | 87.56 | 0.0 | 1595 |
LLPS-Mea-2753 | Mesocricetus auratus | 86.73 | 0.0 | 1607 |
LLPS-Ora-1991 | Ornithorhynchus anatinus | 85.93 | 4e-67 | 241 |
LLPS-Mum-3983 | Mus musculus | 85.91 | 0.0 | 1587 |
LLPS-Ran-4303 | Rattus norvegicus | 85.08 | 0.0 | 1572 |
LLPS-Ova-1528 | Ovis aries | 84.82 | 3e-106 | 340 |
LLPS-Mod-2236 | Monodelphis domestica | 81.94 | 0.0 | 1531 |
LLPS-Sah-3611 | Sarcophilus harrisii | 81.51 | 0.0 | 1429 |
LLPS-Bot-3464 | Bos taurus | 81.26 | 0.0 | 1073 |
LLPS-Mup-4290 | Mustela putorius furo | 76.13 | 0.0 | 1343 |
LLPS-Anp-2056 | Anas platyrhynchos | 74.65 | 0.0 | 1159 |
LLPS-Meg-2984 | Meleagris gallopavo | 73.79 | 0.0 | 1304 |
LLPS-Gaga-2153 | Gallus gallus | 73.77 | 0.0 | 1344 |
LLPS-Pes-2173 | Pelodiscus sinensis | 73.32 | 0.0 | 852 |
LLPS-Fia-1764 | Ficedula albicollis | 72.55 | 0.0 | 1291 |
LLPS-Anc-1701 | Anolis carolinensis | 63.83 | 0.0 | 1069 |
LLPS-Tag-2902 | Taeniopygia guttata | 63.64 | 5e-76 | 255 |
LLPS-Xet-0530 | Xenopus tropicalis | 51.57 | 0.0 | 753 |
LLPS-Orl-1933 | Oryzias latipes | 49.46 | 4e-38 | 158 |
LLPS-Dar-3976 | Danio rerio | 48.7 | 6e-20 | 100 |
LLPS-Lac-3333 | Latimeria chalumnae | 48.11 | 1e-106 | 351 |
LLPS-Icp-2543 | Ictalurus punctatus | 47.83 | 6e-39 | 154 |
LLPS-Pof-2147 | Poecilia formosa | 47.83 | 8e-38 | 158 |
LLPS-Xim-1070 | Xiphophorus maculatus | 46.52 | 2e-37 | 157 |
LLPS-Tar-1641 | Takifugu rubripes | 46.2 | 6e-40 | 154 |
LLPS-Leo-2025 | Lepisosteus oculatus | 46.03 | 4e-08 | 62.0 |
LLPS-Asm-0239 | Astyanax mexicanus | 45.95 | 2e-16 | 89.4 |
LLPS-Caf-0557 | Canis familiaris | 44.0 | 8e-22 | 106 |
LLPS-Scf-3407 | Scleropages formosus | 41.43 | 1e-15 | 86.3 |
LLPS-Scm-3565 | Scophthalmus maximus | 40.0 | 5e-15 | 84.7 |
LLPS-Ten-0719 | Tetraodon nigroviridis | 39.71 | 5e-19 | 92.4 |
LLPS-Orn-2167 | Oreochromis niloticus | 39.23 | 6e-10 | 68.2 |
LLPS-Drm-0498 | Drosophila melanogaster | 36.36 | 9e-10 | 67.4 |
LLPS-Gaa-3379 | Gasterosteus aculeatus | 30.83 | 8e-07 | 57.8 |