LLPS-Hos-1572
PARP2
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
Poly-ADP-ribosyltransferase that mediates poly-ADP-ribosylation of proteins and plays a key role in DNA repair (PubMed:10364231, PubMed:28190768, PubMed:25043379). Mainly mediates glutamate and aspartate ADP-ribosylation of target proteins: the ADP-D-ribosyl group of NAD(+) is transferred to the acceptor carboxyl group of glutamate and aspartate residues and further ADP-ribosyl groups are transferred to the 2'-position of the terminal adenosine moiety, building up a polymer with an average chain length of 20-30 units (PubMed:25043379). ADP-ribosylation follows DNA damage and appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks (PubMed:10364231). Also mediates serine ADP-ribosylation of target proteins following interaction with HPF1; HPF1 conferring serine specificity (PubMed:28190768). In addition to proteins, also able to ADP-ribosylate DNA: preferentially acts on 5'-terminal phosphates at DNA strand breaks termini in nicked duplex (PubMed:27471034). |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENST00000539930.1 | ENSP00000445524.1 |
Ensembl | ENST00000529465.6 | ENSP00000431867.2 |
Ensembl | ENST00000429687.7 | ENSP00000392972.3 |
Ensembl | ENST00000527915.5 | ENSP00000432283.1 |
Ensembl | ENST00000250416.9 | ENSP00000250416.5 |
UniProt | Q9UGN5, PARP2_HUMAN, Q8TEU4, Q9NUV2, Q9UMR4, Q9Y6C8 | |
GeneBank | AF479321, AJ236912, AJ236876, AK001980, AF085734 | BAA92017.1, CAB65088.1, AAL77437.1, AAD29857.1, CAB41505.2 |
RefSeq | NM_001042618.1, NM_005484.3 | NP_001036083.1, NP_005475.2 |
Entrez | 10038 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAARRRRSTG GGRARALNES KRVNNGNTAP EDSSPAKKTR RCQRQESKKM PVAGGKANKD 60 61 RTEDKQDGMP GRSWASKRVS ESVKALLLKG KAPVDPECTA KVGKAHVYCE GNDVYDVMLN 120 121 QTNLQFNNNK YYLIQLLEDD AQRNFSVWMR WGRVGKMGQH SLVACSGNLN KAKEIFQKKF 180 181 LDKTKNNWED REKFEKVPGK YDMLQMDYAT NTQDEEETKK EESLKSPLKP ESQLDLRVQE 240 241 LIKLICNVQA MEEMMMEMKY NTKKAPLGKL TVAQIKAGYQ SLKKIEDCIR AGQHGRALME 300 301 ACNEFYTRIP HDFGLRTPPL IRTQKELSEK IQLLEALGDI EIAIKLVKTE LQSPEHPLDQ 360 361 HYRNLHCALR PLDHESYEFK VISQYLQSTH APTHSDYTMT LLDLFEVEKD GEKEAFREDL 420 421 HNRMLLWHGS RMSNWVGILS HGLRIAPPEA PITGYMFGKG IYFADMSSKS ANYCFASRLK 480 481 NTGLLLLSEV ALGQCNELLE ANPKAEGLLQ GKHSTKGLGK MAPSSAHFVT LNGSTVPLGP 540 541 ASDTGILNPD GYTLNYNEYI VYNPNQVRMR YLLKVQFNFL QLW 583 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCGGCGC GGCGGCGACG GAGCACCGGC GGCGGCAGGG CGAGAGCATT AAATGAAAGC 60 61 AAAAGAGTTA ATAATGGCAA CACGGCTCCA GAAGACTCTT CCCCTGCCAA GAAAACTCGT 120 121 AGATGCCAGA GACAGGAGTC GAAAAAGATG CCTGTGGCTG GAGGAAAAGC TAATAAGGAC 180 181 AGGACAGAAG ACAAGCAAGA TGGTATGCCA GGAAGGTCAT GGGCCAGCAA AAGGGTCTCT 240 241 GAATCTGTGA AGGCCTTGCT GTTAAAGGGC AAAGCTCCTG TGGACCCAGA GTGTACAGCC 300 301 AAGGTGGGGA AGGCTCATGT GTATTGTGAA GGAAATGATG TCTATGATGT CATGCTAAAT 360 361 CAGACCAATC TCCAGTTCAA CAACAACAAG TACTATCTGA TTCAGCTATT AGAAGATGAT 420 421 GCCCAGAGGA ACTTCAGTGT TTGGATGAGA TGGGGCCGAG TTGGGAAAAT GGGACAGCAC 480 481 AGCCTGGTGG CTTGTTCAGG CAATCTCAAC AAGGCCAAGG AAATCTTTCA GAAGAAATTC 540 541 CTTGACAAAA CGAAAAACAA TTGGGAAGAT CGAGAAAAGT TTGAGAAGGT GCCTGGAAAA 600 601 TATGATATGC TACAGATGGA CTATGCCACC AATACTCAGG ATGAAGAGGA AACAAAGAAA 660 661 GAGGAATCTC TTAAATCTCC CTTGAAGCCA GAGTCACAGC TAGATCTTCG GGTACAGGAG 720 721 TTAATAAAGT TGATCTGTAA TGTTCAGGCC ATGGAAGAAA TGATGATGGA AATGAAGTAT 780 781 AATACCAAGA AAGCCCCACT TGGGAAGCTG ACAGTGGCAC AAATCAAGGC AGGTTACCAG 840 841 TCTCTTAAGA AGATTGAGGA TTGTATTCGG GCTGGCCAGC ATGGACGAGC TCTCATGGAA 900 901 GCATGCAATG AATTCTACAC CAGGATTCCG CATGACTTTG GACTCCGTAC TCCTCCACTA 960 961 ATCCGGACAC AGAAGGAACT GTCAGAAAAA ATACAATTAC TAGAGGCTTT GGGAGACATT 1020 1021 GAAATTGCTA TTAAGCTGGT GAAAACAGAG CTACAAAGCC CAGAACACCC ATTGGACCAA 1080 1081 CACTATAGAA ACCTACATTG TGCCTTGCGC CCCCTTGACC ATGAAAGTTA TGAGTTCAAA 1140 1141 GTGATTTCCC AGTACCTACA ATCTACCCAT GCTCCCACAC ACAGCGACTA TACCATGACC 1200 1201 TTGCTGGATT TGTTTGAAGT GGAGAAGGAT GGTGAGAAAG AAGCCTTCAG AGAGGACCTT 1260 1261 CATAACAGGA TGCTTCTATG GCATGGTTCC AGGATGAGTA ACTGGGTGGG AATCTTGAGC 1320 1321 CATGGGCTTC GAATTGCCCC ACCTGAAGCT CCCATCACAG GTTACATGTT TGGGAAAGGA 1380 1381 ATCTACTTTG CTGACATGTC TTCCAAGAGT GCCAATTACT GCTTTGCCTC TCGCCTAAAG 1440 1441 AATACAGGAC TGCTGCTCTT ATCAGAGGTA GCTCTAGGTC AGTGTAATGA ACTACTAGAG 1500 1501 GCCAATCCTA AGGCCGAAGG ATTGCTTCAA GGTAAACATA GCACCAAGGG GCTGGGCAAG 1560 1561 ATGGCTCCCA GTTCTGCCCA CTTCGTCACC CTGAATGGGA GTACAGTGCC ATTAGGACCA 1620 1621 GCAAGTGACA CAGGAATTCT GAATCCAGAT GGTTATACCC TCAACTACAA TGAATATATT 1680 1681 GTATATAACC CCAACCAGGT CCGTATGCGG TACCTTTTAA AGGTTCAGTT TAATTTCCTT 1740 1741 CAGCTGTGGT GA 1752 |
▼ KEYWORD
ID | Family |
3D-structure | |
Acetylation | |
ADP-ribosylation | |
Alternative splicing | |
Complete proteome | |
DNA damage | |
DNA repair | |
DNA-binding | |
Glycosyltransferase | |
NAD | |
Nucleus | |
Phosphoprotein | |
Polymorphism | |
Reference proteome | |
Transferase
|
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Nucleolus | |
Cellular Component | Nucleoplasm | |
Cellular Component | Nucleus | |
Molecular Function | DNA binding | |
Molecular Function | NAD DNA ADP-ribosyltransferase activity | |
Molecular Function | NAD+ ADP-ribosyltransferase activity | |
Molecular Function | Protein ADP-ribosylase activity | |
Biological Process | Base-excision repair | |
Biological Process | DNA ADP-ribosylation | |
Biological Process | DNA repair | |
Biological Process | Double-strand break repair | |
Biological Process | Extrinsic apoptotic signaling pathway | |
Biological Process | Negative regulation of neuron death | |
Biological Process | Peptidyl-serine ADP-ribosylation | |
Biological Process | Positive regulation of cell growth involved in cardiac muscle cell development | |
Biological Process | Protein ADP-ribosylation | |
Biological Process | Protein poly-ADP-ribosylation |
▼ ANNOTATION
Disease | ||||
OMIM | DisGeNET | ActiveDriverDB |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Function | ||||
PIRSF |
Localization | ||||
COMPARTMENTS | NLSdb |
Methylation | ||||
TCGA | ICGC | MethyCancer |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Nol-1745 | Nomascus leucogenys | 99.29 | 0.0 | 1119 |
LLPS-Pat-0073 | Pan troglodytes | 97.71 | 0.0 | 1091 |
LLPS-Gog-3544 | Gorilla gorilla | 97.35 | 0.0 | 1088 |
LLPS-Mal-1887 | Mandrillus leucophaeus | 97.18 | 0.0 | 1097 |
LLPS-Poa-0019 | Pongo abelii | 96.65 | 0.0 | 1080 |
LLPS-Mam-0560 | Macaca mulatta | 95.41 | 0.0 | 1066 |
LLPS-Pap-1375 | Pan paniscus | 95.41 | 0.0 | 1050 |
LLPS-Maf-0722 | Macaca fascicularis | 95.41 | 0.0 | 1066 |
LLPS-Cea-1156 | Cercocebus atys | 95.24 | 0.0 | 1058 |
LLPS-Chs-1412 | Chlorocebus sabaeus | 95.24 | 0.0 | 1045 |
LLPS-Rhb-0872 | Rhinopithecus bieti | 95.06 | 0.0 | 1063 |
LLPS-Man-1133 | Macaca nemestrina | 95.06 | 0.0 | 1064 |
LLPS-Caj-1512 | Callithrix jacchus | 94.7 | 0.0 | 1070 |
LLPS-Otg-0249 | Otolemur garnettii | 90.49 | 0.0 | 1035 |
LLPS-Loa-1048 | Loxodonta africana | 89.61 | 0.0 | 1017 |
LLPS-Cas-0294 | Carlito syrichta | 89.24 | 0.0 | 1020 |
LLPS-Ova-1536 | Ovis aries | 88.89 | 0.0 | 1008 |
LLPS-Bot-1874 | Bos taurus | 88.89 | 0.0 | 1010 |
LLPS-Eqc-2992 | Equus caballus | 88.71 | 0.0 | 1016 |
LLPS-Sus-0744 | Sus scrofa | 88.36 | 0.0 | 1002 |
LLPS-Aon-1445 | Aotus nancymaae | 88.03 | 0.0 | 968 |
LLPS-Aim-1885 | Ailuropoda melanoleuca | 87.63 | 0.0 | 1020 |
LLPS-Ere-0397 | Erinaceus europaeus | 87.54 | 0.0 | 1003 |
LLPS-Urm-1783 | Ursus maritimus | 87.46 | 0.0 | 1019 |
LLPS-Mup-3135 | Mustela putorius furo | 86.95 | 0.0 | 1016 |
LLPS-Ict-1577 | Ictidomys tridecemlineatus | 86.75 | 0.0 | 993 |
LLPS-Fec-1560 | Felis catus | 86.42 | 0.0 | 1010 |
LLPS-Orc-0083 | Oryctolagus cuniculus | 86.17 | 0.0 | 991 |
LLPS-Fud-0297 | Fukomys damarensis | 85.89 | 0.0 | 993 |
LLPS-Cap-0301 | Cavia porcellus | 85.59 | 0.0 | 967 |
LLPS-Caf-0144 | Canis familiaris | 85.19 | 0.0 | 992 |
LLPS-Dio-1600 | Dipodomys ordii | 85.11 | 0.0 | 976 |
LLPS-Mum-0575 | Mus musculus | 83.98 | 0.0 | 973 |
LLPS-Sah-2164 | Sarcophilus harrisii | 83.46 | 0.0 | 900 |
LLPS-Ran-1424 | Rattus norvegicus | 83.07 | 0.0 | 969 |
LLPS-Mod-2433 | Monodelphis domestica | 82.47 | 0.0 | 880 |
LLPS-Mea-0951 | Mesocricetus auratus | 80.95 | 0.0 | 940 |
LLPS-Myl-3043 | Myotis lucifugus | 79.32 | 0.0 | 729 |
LLPS-Lac-1072 | Latimeria chalumnae | 71.71 | 0.0 | 752 |
LLPS-Xet-1418 | Xenopus tropicalis | 68.57 | 0.0 | 732 |
LLPS-Anc-1219 | Anolis carolinensis | 68.24 | 0.0 | 754 |
LLPS-Xim-0633 | Xiphophorus maculatus | 64.21 | 0.0 | 691 |
LLPS-Icp-2820 | Ictalurus punctatus | 64.02 | 0.0 | 692 |
LLPS-Asm-0423 | Astyanax mexicanus | 63.58 | 0.0 | 715 |
LLPS-Scm-1139 | Scophthalmus maximus | 63.04 | 0.0 | 687 |
LLPS-Dar-1649 | Danio rerio | 62.85 | 0.0 | 684 |
LLPS-Tar-2176 | Takifugu rubripes | 62.23 | 0.0 | 545 |
LLPS-Scf-1095 | Scleropages formosus | 62.06 | 0.0 | 699 |
LLPS-Pof-0687 | Poecilia formosa | 61.73 | 0.0 | 704 |
LLPS-Gaa-0193 | Gasterosteus aculeatus | 60.63 | 0.0 | 698 |
LLPS-Orl-1475 | Oryzias latipes | 60.28 | 0.0 | 616 |
LLPS-Orn-0266 | Oreochromis niloticus | 59.78 | 0.0 | 654 |
LLPS-Ten-3163 | Tetraodon nigroviridis | 59.74 | 0.0 | 656 |
LLPS-Sol-0746 | Solanum lycopersicum | 52.91 | 9e-58 | 214 |
LLPS-Zem-0161 | Zea mays | 52.61 | 6e-87 | 278 |
LLPS-Coc-0897 | Corchorus capsularis | 52.0 | 3e-06 | 54.7 |
LLPS-Leo-1975 | Lepisosteus oculatus | 51.94 | 0.0 | 533 |
LLPS-Cis-0156 | Ciona savignyi | 50.98 | 1e-174 | 512 |
LLPS-Tra-1496 | Triticum aestivum | 50.1 | 1e-147 | 451 |
LLPS-Cus-0060 | Cucumis sativus | 48.96 | 3e-139 | 427 |
LLPS-Amt-0791 | Amborella trichopoda | 48.86 | 1e-146 | 445 |
LLPS-Brn-3160 | Brassica napus | 48.85 | 5e-147 | 446 |
LLPS-Brr-0678 | Brassica rapa | 48.63 | 7e-146 | 442 |
LLPS-Phv-0221 | Phaseolus vulgaris | 48.54 | 4e-145 | 439 |
LLPS-Bro-1088 | Brassica oleracea | 48.33 | 8e-146 | 445 |
LLPS-Mae-1535 | Manihot esculenta | 48.33 | 1e-133 | 411 |
LLPS-Viv-0205 | Vitis vinifera | 48.23 | 6e-144 | 435 |
LLPS-Hov-0763 | Hordeum vulgare | 48.23 | 2e-138 | 429 |
LLPS-Glm-0196 | Glycine max | 48.12 | 2e-140 | 427 |
LLPS-Gor-2055 | Gossypium raimondii | 48.02 | 2e-143 | 438 |
LLPS-Thc-1222 | Theobroma cacao | 47.8 | 9e-145 | 440 |
LLPS-Sei-1591 | Setaria italica | 47.73 | 1e-136 | 417 |
LLPS-Brd-0095 | Brachypodium distachyon | 47.71 | 2e-133 | 414 |
LLPS-Tru-1270 | Triticum urartu | 47.67 | 5e-129 | 405 |
LLPS-Sem-0309 | Selaginella moellendorffii | 47.61 | 4e-145 | 441 |
LLPS-Pot-0052 | Populus trichocarpa | 47.59 | 2e-143 | 436 |
LLPS-Hea-2308 | Helianthus annuus | 47.4 | 1e-141 | 432 |
LLPS-Art-0542 | Arabidopsis thaliana | 47.39 | 2e-145 | 441 |
LLPS-Lep-1511 | Leersia perrieri | 47.08 | 5e-139 | 426 |
LLPS-Dac-0097 | Daucus carota | 47.0 | 7e-144 | 440 |
LLPS-Cii-1479 | Ciona intestinalis | 46.98 | 2e-158 | 472 |
LLPS-Ori-2039 | Oryza indica | 46.97 | 8e-07 | 56.2 |
LLPS-Nia-0607 | Nicotiana attenuata | 46.91 | 3e-136 | 418 |
LLPS-Orbr-2008 | Oryza brachyantha | 46.76 | 2e-140 | 429 |
LLPS-Sot-1210 | Solanum tuberosum | 46.64 | 1e-132 | 412 |
LLPS-Orm-0778 | Oryza meridionalis | 46.25 | 9e-138 | 422 |
LLPS-Orr-1724 | Oryza rufipogon | 46.23 | 4e-135 | 420 |
LLPS-Met-1811 | Medicago truncatula | 45.93 | 1e-135 | 417 |
LLPS-Prp-2051 | Prunus persica | 45.75 | 1e-144 | 439 |
LLPS-Mua-1430 | Musa acuminata | 45.27 | 1e-129 | 397 |
LLPS-Ors-0056 | Oryza sativa | 45.06 | 7e-138 | 422 |
LLPS-Arl-2051 | Arabidopsis lyrata | 44.91 | 3e-146 | 444 |
LLPS-Sob-0951 | Sorghum bicolor | 44.06 | 3e-118 | 367 |
LLPS-Orp-1976 | Oryza punctata | 44.05 | 1e-138 | 425 |
LLPS-Org-1189 | Oryza glaberrima | 43.63 | 5e-137 | 421 |
LLPS-Orb-1681 | Oryza barthii | 43.63 | 7e-131 | 419 |
LLPS-Php-0916 | Physcomitrella patens | 43.33 | 1e-138 | 428 |
LLPS-Orgl-0958 | Oryza glumaepatula | 42.88 | 2e-128 | 398 |
LLPS-Orni-1874 | Oryza nivara | 41.85 | 2e-130 | 402 |
LLPS-Tag-1555 | Taeniopygia guttata | 41.14 | 2e-115 | 371 |
LLPS-Gaga-3404 | Gallus gallus | 41.14 | 2e-115 | 374 |
LLPS-Meg-1238 | Meleagris gallopavo | 41.14 | 4e-115 | 372 |
LLPS-Anp-0454 | Anas platyrhynchos | 40.94 | 1e-118 | 379 |
LLPS-Paa-0580 | Papio anubis | 40.94 | 1e-117 | 380 |
LLPS-Fia-1185 | Ficedula albicollis | 40.75 | 3e-113 | 367 |
LLPS-Pes-0866 | Pelodiscus sinensis | 40.47 | 7e-117 | 377 |
LLPS-Via-0824 | Vigna angularis | 40.08 | 5e-99 | 317 |
LLPS-Drm-0204 | Drosophila melanogaster | 40.0 | 2e-114 | 371 |
LLPS-Pyt-1075 | Pyrenophora teres | 39.88 | 2e-91 | 302 |
LLPS-Map-0755 | Magnaporthe poae | 39.81 | 2e-85 | 290 |
LLPS-Ora-0714 | Ornithorhynchus anatinus | 39.74 | 3e-116 | 375 |
LLPS-Fus-0229 | Fusarium solani | 39.46 | 5e-86 | 289 |
LLPS-Cog-0505 | Colletotrichum gloeosporioides | 39.11 | 4e-78 | 267 |
LLPS-Zyt-0954 | Zymoseptoria tritici | 38.99 | 6e-81 | 272 |
LLPS-Fuo-0590 | Fusarium oxysporum | 38.92 | 1e-95 | 315 |
LLPS-Trv-1319 | Trichoderma virens | 38.88 | 3e-87 | 291 |
LLPS-Fuv-1273 | Fusarium verticillioides | 38.88 | 1e-88 | 296 |
LLPS-Ved-0826 | Verticillium dahliae | 38.81 | 3e-79 | 271 |
LLPS-Phn-0556 | Phaeosphaeria nodorum | 38.63 | 7e-83 | 279 |
LLPS-Trr-1190 | Trichoderma reesei | 38.61 | 1e-92 | 306 |
LLPS-Beb-0252 | Beauveria bassiana | 38.61 | 8e-93 | 308 |
LLPS-Pytr-1032 | Pyrenophora triticirepentis | 38.51 | 1e-88 | 294 |
LLPS-Mao-1004 | Magnaporthe oryzae | 38.48 | 2e-84 | 285 |
LLPS-Gag-0349 | Gaeumannomyces graminis | 38.1 | 3e-84 | 287 |
LLPS-Dos-0339 | Dothistroma septosporum | 37.99 | 1e-91 | 301 |
LLPS-Aso-1146 | Aspergillus oryzae | 37.79 | 3e-94 | 310 |
LLPS-Asni-0241 | Aspergillus niger | 37.62 | 2e-88 | 293 |
LLPS-Asf-0875 | Aspergillus flavus | 37.6 | 9e-94 | 308 |
LLPS-Lem-0868 | Leptosphaeria maculans | 37.22 | 2e-82 | 288 |
LLPS-Cogr-0969 | Colletotrichum graminicola | 36.82 | 1e-79 | 272 |
LLPS-Asn-0677 | Aspergillus nidulans | 36.13 | 3e-95 | 312 |
LLPS-Asc-0626 | Aspergillus clavatus | 36.1 | 1e-82 | 279 |
LLPS-Asfu-1606 | Aspergillus fumigatus | 36.01 | 8e-95 | 311 |
LLPS-Ast-1421 | Aspergillus terreus | 35.88 | 1e-92 | 305 |
LLPS-Cae-0773 | Caenorhabditis elegans | 35.76 | 3e-85 | 291 |
LLPS-Nef-1280 | Neosartorya fischeri | 35.47 | 1e-91 | 303 |