LLPS-Hos-1459
RPL10A
▼ OVERVIEW
Status: | Reviewed |
Protein Name: | 60S ribosomal protein L10a; CSA-19; Large ribosomal subunit protein uL1; Neural precursor cell expressed developmentally down-regulated protein 6; NEDD-6 |
Gene Name: | RPL10A, NEDD6 |
Ensembl Gene: | ENSG00000198755.10 |
Ensembl Protein: | ENSP00000363018.3 |
Organism: | Homo sapiens |
Taxa ID: | 9606 |
LLPS Type: | Client |
▼ Classification
Condensates:
Condensate | Description | Tissue/Cell | PMIDs |
---|---|---|---|
Nucleolus | "...SILAC-based approaches identified 351 proteins with 24 proteins showing at least a 2-fold change after infection." | HeLa cells | 19812395 |
Postsynaptic density | "...We report the first direct comparison of the proteome of triplicate isolates of mouse and human cortical postsynaptic densities. The mouse postsynaptic density comprised 1556 proteins and the human one 1461." | Human cortex | 23071613 |
▼ FUNCTION
Component of the large ribosomal subunit. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENST00000322203.6 | ENSP00000363018.3 |
UniProt | P62906, RL10A_HUMAN, B2R801, P52859, P53025, Q5TZT6, Q8J013 | |
GeneBank | AB082926, AL022721, BC070216, BC006791, BC011366, AK313181, BT020041, CH471081, U12404, BT020040 | EAX03831.1, AAH06791.1, AAV38843.1, AAV38844.1, AAH70216.1, BAG35998.1, BAC16802.1, AAH11366.1, AAA86463.1 |
RefSeq | NM_007104.4 | NP_009035.3 |
Entrez | 4736 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MSSKVSRDTL YEAVREVLHG NQRKRRKFLE TVELQISLKN YDPQKDKRFS GTVRLKSTPR 60 61 PKFSVCVLGD QQHCDEAKAV DIPHMDIEAL KKLNKNKKLV KKLAKKYDAF LASESLIKQI 120 121 PRILGPGLNK AGKFPSLLTH NENMVAKVDE VKSTIKFQMK KVLCLAVAVG HVKMTDDELV 180 181 YNIHLAVNFL VSLLKKNWQN VRALYIKSTM GKPQRLY 217 |
Nucleotide CDS Sequence (FASTA) |
1 ATGAGCAGCA AAGTCTCTCG CGACACCCTG TACGAGGCGG TGCGGGAAGT CCTGCACGGG 60 61 AACCAGCGCA AGCGCCGCAA GTTCCTGGAG ACGGTGGAGT TGCAGATCAG CTTGAAGAAC 120 121 TATGATCCCC AGAAGGACAA GCGCTTCTCG GGCACCGTCA GGCTTAAGTC CACTCCCCGC 180 181 CCTAAGTTCT CTGTGTGTGT CCTGGGGGAC CAGCAGCACT GTGACGAGGC TAAGGCCGTG 240 241 GATATCCCCC ACATGGACAT CGAGGCGCTG AAAAAACTCA ACAAGAATAA AAAACTGGTC 300 301 AAGAAGCTGG CCAAGAAGTA TGATGCGTTT TTGGCCTCAG AGTCTCTGAT CAAGCAGATT 360 361 CCACGAATCC TCGGCCCAGG TTTAAATAAG GCAGGAAAGT TCCCTTCCCT GCTCACACAC 420 421 AACGAAAACA TGGTGGCCAA AGTGGATGAG GTGAAGTCCA CAATCAAGTT CCAAATGAAG 480 481 AAGGTGTTAT GTCTGGCTGT AGCTGTTGGT CACGTGAAGA TGACAGACGA TGAGCTTGTG 540 541 TATAACATTC ACCTGGCTGT CAACTTCTTG GTGTCATTGC TCAAGAAAAA CTGGCAGAAT 600 601 GTCCGGGCCT TATATATCAA GAGCACCATG GGCAAGCCCC AGCGCCTATA TTAA 654 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Cytosol | |
Cellular Component | Cytosolic large ribosomal subunit | |
Cellular Component | Extracellular exosome | |
Cellular Component | Focal adhesion | |
Cellular Component | Membrane | |
Cellular Component | Nucleus | |
Cellular Component | Polysomal ribosome | |
Cellular Component | Postsynaptic density | |
Molecular Function | RNA binding | |
Molecular Function | Structural constituent of ribosome | |
Biological Process | Cytoplasmic translation | |
Biological Process | Maturation of LSU-rRNA | |
Biological Process | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | |
Biological Process | Response to ethanol | |
Biological Process | SRP-dependent cotranslational protein targeting to membrane | |
Biological Process | Translation | |
Biological Process | Translational initiation | |
Biological Process | Viral transcription |
▼ ANNOTATION
Disorder | ||||
IUPred2A |
Disease | ||||
OMIM | DisGeNET | ActiveDriverDB |
Drug | ||||
CTD |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Function | ||||
PIRSF | CORUM | CellMarker | RaftProt |
Localization | ||||
COMPARTMENTS |
Methylation | ||||
TCGA | ICGC | MethyCancer |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Ran-2035 | Rattus norvegicus | 100.0 | 2e-143 | 406 |
LLPS-Mal-3024 | Mandrillus leucophaeus | 100.0 | 2e-143 | 406 |
LLPS-Aim-2464 | Ailuropoda melanoleuca | 100.0 | 2e-142 | 404 |
LLPS-Ova-3246 | Ovis aries | 100.0 | 3e-142 | 404 |
LLPS-Tut-0844 | Tursiops truncatus | 100.0 | 4e-97 | 286 |
LLPS-Dio-0631 | Dipodomys ordii | 100.0 | 2e-143 | 406 |
LLPS-Bot-0019 | Bos taurus | 100.0 | 2e-143 | 406 |
LLPS-Caj-3227 | Callithrix jacchus | 100.0 | 2e-143 | 406 |
LLPS-Mea-0113 | Mesocricetus auratus | 100.0 | 2e-143 | 406 |
LLPS-Mum-4178 | Mus musculus | 100.0 | 2e-143 | 406 |
LLPS-Chs-1311 | Chlorocebus sabaeus | 100.0 | 2e-143 | 406 |
LLPS-Cea-1900 | Cercocebus atys | 100.0 | 2e-143 | 406 |
LLPS-Sus-1813 | Sus scrofa | 100.0 | 2e-143 | 406 |
LLPS-Nol-0572 | Nomascus leucogenys | 100.0 | 2e-143 | 406 |
LLPS-Caf-2741 | Canis familiaris | 100.0 | 2e-142 | 404 |
LLPS-Eqc-3404 | Equus caballus | 100.0 | 5e-58 | 196 |
LLPS-Cap-0547 | Cavia porcellus | 100.0 | 2e-143 | 406 |
LLPS-Orc-2706 | Oryctolagus cuniculus | 100.0 | 2e-143 | 406 |
LLPS-Fec-3341 | Felis catus | 100.0 | 2e-143 | 406 |
LLPS-Sah-3038 | Sarcophilus harrisii | 99.54 | 1e-141 | 402 |
LLPS-Mam-2596 | Macaca mulatta | 99.54 | 2e-142 | 404 |
LLPS-Aon-0453 | Aotus nancymaae | 99.53 | 9e-140 | 397 |
LLPS-Maf-0369 | Macaca fascicularis | 99.08 | 1e-142 | 404 |
LLPS-Rhb-1479 | Rhinopithecus bieti | 99.08 | 4e-141 | 400 |
LLPS-Mod-1050 | Monodelphis domestica | 99.08 | 5e-142 | 403 |
LLPS-Man-3450 | Macaca nemestrina | 99.08 | 1e-142 | 404 |
LLPS-Paa-2323 | Papio anubis | 98.62 | 5e-142 | 403 |
LLPS-Gog-0417 | Gorilla gorilla | 98.62 | 7e-142 | 402 |
LLPS-Pat-2616 | Pan troglodytes | 98.62 | 7e-142 | 402 |
LLPS-Pap-0811 | Pan paniscus | 98.62 | 7e-142 | 402 |
LLPS-Myl-3300 | Myotis lucifugus | 97.22 | 6e-141 | 400 |
LLPS-Ora-1709 | Ornithorhynchus anatinus | 97.22 | 3e-139 | 395 |
LLPS-Fia-0851 | Ficedula albicollis | 95.37 | 1e-136 | 389 |
LLPS-Anc-1189 | Anolis carolinensis | 95.35 | 8e-135 | 385 |
LLPS-Pes-0799 | Pelodiscus sinensis | 94.77 | 5e-99 | 294 |
LLPS-Tag-1942 | Taeniopygia guttata | 94.57 | 9e-111 | 322 |
LLPS-Gaga-0957 | Gallus gallus | 94.47 | 6e-136 | 387 |
LLPS-Loa-2398 | Loxodonta africana | 94.47 | 4e-134 | 383 |
LLPS-Xet-0258 | Xenopus tropicalis | 94.44 | 5e-134 | 384 |
LLPS-Meg-0686 | Meleagris gallopavo | 94.44 | 4e-135 | 385 |
LLPS-Lac-0164 | Latimeria chalumnae | 93.87 | 2e-92 | 275 |
LLPS-Anp-2636 | Anas platyrhynchos | 93.46 | 6e-132 | 377 |
LLPS-Asm-0611 | Astyanax mexicanus | 93.02 | 1e-130 | 374 |
LLPS-Ten-0941 | Tetraodon nigroviridis | 93.02 | 8e-131 | 374 |
LLPS-Xim-1503 | Xiphophorus maculatus | 92.56 | 1e-129 | 371 |
LLPS-Tar-0036 | Takifugu rubripes | 92.56 | 6e-131 | 375 |
LLPS-Icp-3672 | Ictalurus punctatus | 92.56 | 1e-130 | 374 |
LLPS-Leo-3077 | Lepisosteus oculatus | 92.56 | 3e-131 | 375 |
LLPS-Pof-0192 | Poecilia formosa | 92.56 | 1e-129 | 371 |
LLPS-Dar-0014 | Danio rerio | 92.56 | 6e-131 | 375 |
LLPS-Orn-2593 | Oreochromis niloticus | 91.63 | 3e-129 | 370 |
LLPS-Orl-0318 | Oryzias latipes | 91.24 | 1e-128 | 370 |
LLPS-Scm-0056 | Scophthalmus maximus | 90.23 | 2e-128 | 369 |
LLPS-Scf-0813 | Scleropages formosus | 89.88 | 1e-87 | 265 |
LLPS-Fud-1456 | Fukomys damarensis | 89.42 | 1e-39 | 138 |
LLPS-Urm-3342 | Ursus maritimus | 88.94 | 3e-116 | 337 |
LLPS-Poa-3449 | Pongo abelii | 85.71 | 7e-114 | 330 |
LLPS-Cas-0143 | Carlito syrichta | 80.18 | 2e-101 | 298 |
LLPS-Ict-4119 | Ictidomys tridecemlineatus | 80.18 | 4e-98 | 290 |
LLPS-Cii-0101 | Ciona intestinalis | 77.21 | 5e-109 | 319 |
LLPS-Drm-1350 | Drosophila melanogaster | 76.96 | 4e-109 | 319 |
LLPS-Cis-1502 | Ciona savignyi | 75.58 | 1e-106 | 313 |
LLPS-Cae-0421 | Caenorhabditis elegans | 73.02 | 5e-102 | 301 |
LLPS-Ere-1009 | Erinaceus europaeus | 72.0 | 4e-36 | 130 |
LLPS-Osl-1178 | Ostreococcus lucimarinus | 68.84 | 1e-90 | 273 |
LLPS-Ors-0135 | Oryza sativa | 67.69 | 1e-42 | 147 |
LLPS-Ori-0486 | Oryza indica | 67.44 | 4e-39 | 146 |
LLPS-Tra-0669 | Triticum aestivum | 66.98 | 3e-90 | 271 |
LLPS-Scj-0566 | Schizosaccharomyces japonicus | 66.98 | 4e-89 | 268 |
LLPS-Crn-0460 | Cryptococcus neoformans | 66.84 | 3e-83 | 254 |
LLPS-Scs-0334 | Sclerotinia sclerotiorum | 66.84 | 1e-81 | 249 |
LLPS-Scc-1075 | Schizosaccharomyces cryophilus | 66.51 | 6e-87 | 263 |
LLPS-Put-0569 | Puccinia triticina | 66.49 | 6e-76 | 234 |
LLPS-Brd-1780 | Brachypodium distachyon | 66.05 | 7e-89 | 268 |
LLPS-Orgl-1810 | Oryza glumaepatula | 66.05 | 4e-89 | 268 |
LLPS-Orbr-1409 | Oryza brachyantha | 66.05 | 9e-89 | 268 |
LLPS-Sei-0069 | Setaria italica | 65.58 | 9e-89 | 268 |
LLPS-Abg-1887 | Absidia glauca | 65.58 | 5e-87 | 263 |
LLPS-Nia-0332 | Nicotiana attenuata | 65.58 | 2e-89 | 269 |
LLPS-Mua-0102 | Musa acuminata | 65.19 | 3e-57 | 185 |
LLPS-Chr-1417 | Chlamydomonas reinhardtii | 65.12 | 1e-82 | 252 |
LLPS-Prp-1780 | Prunus persica | 65.12 | 2e-88 | 266 |
LLPS-Pot-0272 | Populus trichocarpa | 65.12 | 6e-89 | 268 |
LLPS-Tum-1246 | Tuber melanosporum | 64.86 | 1e-44 | 152 |
LLPS-Asc-1320 | Aspergillus clavatus | 64.81 | 3e-84 | 256 |
LLPS-Tru-0123 | Triticum urartu | 64.76 | 8e-80 | 250 |
LLPS-Arl-0907 | Arabidopsis lyrata | 64.65 | 9e-89 | 268 |
LLPS-Scp-0264 | Schizosaccharomyces pombe | 64.65 | 5e-85 | 258 |
LLPS-Via-0147 | Vigna angularis | 64.65 | 1e-86 | 262 |
LLPS-Sot-0762 | Solanum tuberosum | 64.65 | 3e-87 | 264 |
LLPS-Glm-1845 | Glycine max | 64.65 | 1e-87 | 265 |
LLPS-Sol-1145 | Solanum lycopersicum | 64.65 | 2e-87 | 264 |
LLPS-Brn-0335 | Brassica napus | 64.65 | 1e-83 | 259 |
LLPS-Bro-0755 | Brassica oleracea | 64.65 | 4e-87 | 263 |
LLPS-Asn-1071 | Aspergillus nidulans | 64.35 | 3e-82 | 251 |
LLPS-Nef-0267 | Neosartorya fischeri | 64.35 | 1e-83 | 254 |
LLPS-Orm-0611 | Oryza meridionalis | 64.32 | 9e-76 | 249 |
LLPS-Hov-0847 | Hordeum vulgare | 64.19 | 3e-86 | 262 |
LLPS-Org-0132 | Oryza glaberrima | 64.19 | 2e-87 | 264 |
LLPS-Spr-0625 | Sporisorium reilianum | 64.19 | 2e-86 | 262 |
LLPS-Sob-1216 | Sorghum bicolor | 64.19 | 9e-88 | 265 |
LLPS-Phv-2047 | Phaseolus vulgaris | 64.19 | 1e-86 | 262 |
LLPS-Gor-0619 | Gossypium raimondii | 64.19 | 5e-87 | 263 |
LLPS-Art-1200 | Arabidopsis thaliana | 64.19 | 3e-88 | 266 |
LLPS-Asni-0531 | Aspergillus niger | 63.89 | 3e-82 | 251 |
LLPS-Asfu-0737 | Aspergillus fumigatus | 63.89 | 4e-82 | 250 |
LLPS-Cus-0508 | Cucumis sativus | 63.72 | 1e-86 | 262 |
LLPS-Met-1035 | Medicago truncatula | 63.72 | 3e-86 | 261 |
LLPS-Hea-0385 | Helianthus annuus | 63.72 | 1e-87 | 265 |
LLPS-Thc-2271 | Theobroma cacao | 63.72 | 3e-86 | 261 |
LLPS-Orb-0479 | Oryza barthii | 63.72 | 1e-82 | 252 |
LLPS-Zem-0500 | Zea mays | 63.72 | 9e-88 | 265 |
LLPS-Usm-0654 | Ustilago maydis | 63.72 | 5e-86 | 261 |
LLPS-Nec-1224 | Neurospora crassa | 63.43 | 1e-83 | 254 |
LLPS-Lem-0646 | Leptosphaeria maculans | 63.43 | 1e-82 | 252 |
LLPS-Pyt-0025 | Pyrenophora teres | 63.43 | 9e-83 | 252 |
LLPS-Mel-1051 | Melampsora laricipopulina | 63.43 | 2e-84 | 257 |
LLPS-Phn-1068 | Phaeosphaeria nodorum | 63.43 | 4e-83 | 253 |
LLPS-Pytr-1256 | Pyrenophora triticirepentis | 63.43 | 1e-82 | 252 |
LLPS-Ast-0218 | Aspergillus terreus | 63.43 | 6e-82 | 250 |
LLPS-Cym-0359 | Cyanidioschyzon merolae | 63.3 | 1e-84 | 257 |
LLPS-Php-0731 | Physcomitrella patens | 63.26 | 3e-85 | 258 |
LLPS-Amt-0156 | Amborella trichopoda | 63.26 | 8e-85 | 258 |
LLPS-Asf-0916 | Aspergillus flavus | 62.96 | 1e-81 | 249 |
LLPS-Zyt-0953 | Zymoseptoria tritici | 62.96 | 1e-81 | 249 |
LLPS-Aso-0426 | Aspergillus oryzae | 62.96 | 1e-81 | 249 |
LLPS-Cog-0529 | Colletotrichum gloeosporioides | 62.96 | 4e-81 | 248 |
LLPS-Pug-0524 | Puccinia graminis | 62.96 | 9e-84 | 257 |
LLPS-Lep-0319 | Leersia perrieri | 62.95 | 3e-85 | 259 |
LLPS-Dac-0830 | Daucus carota | 62.79 | 4e-85 | 258 |
LLPS-Coc-0753 | Corchorus capsularis | 62.79 | 4e-86 | 261 |
LLPS-Viv-1199 | Vitis vinifera | 62.79 | 2e-85 | 262 |
LLPS-Orni-0898 | Oryza nivara | 62.56 | 2e-85 | 259 |
LLPS-Map-0302 | Magnaporthe poae | 62.5 | 3e-79 | 243 |
LLPS-Fuv-0479 | Fusarium verticillioides | 62.5 | 3e-82 | 251 |
LLPS-Trv-1354 | Trichoderma virens | 62.5 | 2e-81 | 249 |
LLPS-Fuo-0221 | Fusarium oxysporum | 62.5 | 3e-82 | 251 |
LLPS-Sem-1130 | Selaginella moellendorffii | 62.33 | 3e-84 | 256 |
LLPS-Mae-2520 | Manihot esculenta | 62.33 | 7e-87 | 263 |
LLPS-Brr-2065 | Brassica rapa | 62.33 | 1e-80 | 246 |
LLPS-Yal-1437 | Yarrowia lipolytica | 62.21 | 2e-82 | 251 |
LLPS-Kop-1011 | Komagataella pastoris | 62.04 | 3e-78 | 241 |
LLPS-Coo-0127 | Colletotrichum orbiculare | 62.04 | 4e-79 | 243 |
LLPS-Asg-0077 | Ashbya gossypii | 62.04 | 3e-78 | 241 |
LLPS-Ved-0793 | Verticillium dahliae | 62.04 | 2e-79 | 244 |
LLPS-Cogr-0503 | Colletotrichum graminicola | 62.04 | 1e-79 | 244 |
LLPS-Fus-0144 | Fusarium solani | 62.04 | 1e-81 | 249 |
LLPS-Orp-1454 | Oryza punctata | 61.86 | 2e-81 | 249 |
LLPS-Blg-1138 | Blumeria graminis | 61.57 | 1e-81 | 249 |
LLPS-Mao-0762 | Magnaporthe oryzae | 61.57 | 2e-78 | 241 |
LLPS-Gag-0339 | Gaeumannomyces graminis | 61.57 | 5e-79 | 243 |
LLPS-Trr-0483 | Trichoderma reesei | 61.57 | 3e-81 | 248 |
LLPS-Gas-0681 | Galdieria sulphuraria | 61.4 | 3e-84 | 256 |
LLPS-Beb-1130 | Beauveria bassiana | 61.11 | 3e-80 | 246 |
LLPS-Chc-0881 | Chondrus crispus | 60.93 | 2e-82 | 251 |
LLPS-Miv-0118 | Microbotryum violaceum | 60.55 | 3e-81 | 248 |
LLPS-Orr-0587 | Oryza rufipogon | 60.0 | 7e-83 | 255 |
LLPS-Sac-1249 | Saccharomyces cerevisiae | 59.72 | 6e-77 | 237 |
LLPS-Vir-0050 | Vigna radiata | 58.55 | 2e-80 | 247 |
LLPS-Mup-3247 | Mustela putorius furo | 55.09 | 7e-59 | 190 |